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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100297g3.7171.mrna |
| Orig protein id | gnl|cribi|Naga_100297g3.7171 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:139600..141159 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7932 ID=rna7932|Name=rna7932|organism=Nannochloropsis gaditana|type=mRNA|length=1746bp
AGCGTACGTGACCTCCACTCGTTTTGGAGCTTAAAAGGAACGCAGTTTTC
ACATCCGGCCCACTGCGGCGACAAGACAGAGGGTGTACGCGAGCCAAGAC
GAGCTAGAGTAAATATTTGATACGAGCGACCGAAAACAAGGTTCAAGGCG
CGGGATCTCTTGTCACTGCTTCACGGAAAGCAGCGCAGCCAAGAGAGGAA
ACAAATTGAAGTCGGGTACTGCAGCTGCTGCTTATCAAGTCAAACCACCA
ACAGCTACGGATGTCTTCGTCGTCGTCCTCCACCACCACCTCGCCAAATG
CAGGCAACAATCTGAGTGCCCCCATGGCAGTGGACGGCCAGGCCAGCTTC
TTCCCGGCGGACGTGGTACACGCCGCCAAGGATGTCTTGTCATCCATTGT
GGGCTCAGCGATGTGCGTCTACACTGGGCAGCCTTTCGATACAGTAAAAG
TACGAATGCAAGCCCGTCCTGAGGCGTTCAGCTCTCCCATTCAATGTTTT
ATCAGCACGTTCAGAGAAGAAGGGCTCCGGGCCCTTTGGAAGGGAAGCGT
CCCCGCATTGGTCGGCGCCGTCAGTGAGAACGCGGTCGCTTTCAGCGTCA
ACCAGCAGCTGAAGCGGATATTGGCCGATTTGGAAGGATACGGCCTGGGG
AATGAGAGCAACCAGGAAAGTCGGAAGGCGGAAGCGAAGGAGGAAAGCTT
GGTTGTGCCCTTCTTGACGGGCGGTTTTACAGGCATCTTCACCTCCGCCG
CCCTCTGTCCCAGCGACGTGATCAAATGCAAAGTCCAGGTCTCCCGCGCC
ATGCTAAAGACAGGAGAAACCGCCATGGACGCCCAGGAAATGCTGGTCCA
CGTCTTGAAGACCCAGGGTGTCAAGGGCTTGTTCGTGGGGCTGGGGGCCC
AGTTTGCCCGCGACATCCCTTTCTACGCCTTCTTCTTTGGGACCTACGAA
TTGAGCTTGGTCGCCCTCAAGGCCTACACGACCATGCCCCAAGAAGGAGC
GTATCTAGTGGCGGGTGGTTTGGCAGGTGTGGCGGGCTGGGCGGCCGTCA
TGCCGATCGACATGGCCAAAAGCATCATACAAACCTCCCCGAACCCCAAA
AGCCTCATCCCTACCATGATGGACGTGGCGCGGACCAGGGGCCCGATGGC
CCTGTATTCAGGTCTGGGAGTAGCTGTGTTCCGTGCCTTTCCTGCCAATG
CCGCCCTCTTCCTTGGATATGAGCTGGCCAGAGAAATTTTGGACTAGCTT
CCTCGACGCACGGCGTCAAGAGGAAGTTTATTGTTGCTGATGTTGCCAGA
GGGCTGCATATAGGCCACCACACCACGCTTGAGAGCTTCCTCTTTTCGGT
CCGTAGCTTTACTGTGCCAAGAAGCACAATGGAACAAATAAAGAAATCTC
ACATTCATGCGTGTGATGCGTAATGATGCAGCGATGTAAATATACATGCA
TAACTCTCATGGTTGGTACTTGGAATTCCGACAGCAACTGTAGCAGATCT
GTCGCTCTATCAGCAATAGGAAAAATGTTTATAAATGGTAGTGAGAGCTA
GATACAGCGCATGTCTACAGAATGGGGGTAATCCGTATAGAAGGTTCTAA
TGCATCGATACTACAACTACTTTCTTGTCACATGAAGAGGGAGCAATGGA
AATGAGGACTGTCGGTAGTAGAGTGGATTTTCCGAGGGATTAGAAGCGAA
ATTTTACAATAAGTTGAAAATAAAAGCCAGAAATATTGGACTGAAT back to topprotein sequence of rna7932 >rna7932-protein ID=rna7932-protein|Name=rna7932|organism=Nannochloropsis gaditana|type=polypeptide|length=318bp
MSSASANYFSTAIFGQSQEKRTLVLPVTSPVGDLSSSSCPPTTQGSGSKN
ANGLPSKSVNSTPDGGNSDFKNKYTPFPPTTHSISPSSPSPRFRDWLRPS
KMTSSVSALLDVWIPWLTYLGIGIGSENFVVGGLVAAGVAIAGFIFQAFR
FYYQRTLRTWPKPQAVGILMTWVGNAVYVSRIASNKETASRYTLLVVITG
VVLSNFIAIVMGHPALLDEAKEHVASEEEEKHPLFLRMHTIASYGLLFLS
LLQWPCFFLAAFRFPNDKALTPILLLALPLGSLIITLVIITLYLRREEKR
LSQAMRAPLLAVDVEQGG back to topmRNA from alignment at KK037247.1:139600..141159+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7932 ID=rna7932|Name=rna7932|organism=Nannochloropsis gaditana|type=mRNA|length=1560bp|location=Sequence derived from alignment at KK037247.1:139600..141159+ (Nannochloropsis gaditana)
AGTCCTGCTACCATGCGTTGTGTCCCTTACCATCGAAAATATATCTTACT
GGCCTTCTGATATCTTTTCGCTTGTTGTCACATTCTGTATATCTTAAAAA
AGAAGCGCAATACAGTTTCGAAGGCAGGAACGAACTCGCTGACGCGCGCT
GCGAACACAGCAGCAAGATGTCTTCAGCTTCAGCAAACTACTTTTCTACA
GCTATATTCGGTCAGAGCCAAGAGAAAAGAACTCTTGTTTTGCCAGTCAC
TTCACCTGTGGGGgacctctcctcttcctcctgtccccccaCAACTCAGG
GGAGCGGGTCGAAAAATGCCAACGGGCTGCCTTCAAAATCCGTCAATTCC
ACACCAGACGGCGGCAATTCTGATTTTAAAAATAAATAtacaccttttcc
tcccacaaCCCATtcaatttctccttcttcaccatCTCCACGCTTTCGGG
ACTGGCTTCGGCCATCCAAAATGACGTCCTCAGTCTCTGCCCTTCTCGAC
GTGTGGATTCCATGGCTGACCTACCTTGGGATAGGTATCGGAAGCGAAAA
CTTTGTAGTTGGAGGTCTGGTTGCGGCAGGTGTGGCGATTGCGGGATTCA
TTTTCCAAGCTTTCCGGTTCTACTACCAGAGGACTTTGCGGACTTGGCCG
AAGCCACAAGCAGTAGGAATCCTTATGACCTGGGTGGGCAACGCCGTATA
CGTATCTAGAATAGCTTCCAACAAAGAGACAGCATCCGTAAGTATTTGCA
TGGCTCGAGACGTGACAAAATTCGAatggagagtgggaggatgTCTCGGC
TGGAGGTTGCACAGGCTTGACTTGTTCTTTCTTCCTATTTTTCCGCTGTG
TATCCCTGTAGCGATACACTCTCCTCGTCGTTATCACAGGTGTAGTGCTG
TCAAATTTCATCGCGATAGTCATGGGTCATCCAGCCTTACTCGATGAAGC
GAAAGAGCACGTGgcgagcgaggaagaggagaaacaccctctcttcctcc
ggatGCATACCATCGCATCGTACGGCCTTCTCTTTCTGAGCCTCCTGCAG
TGGCCCTGCTTTTTCCTCGCGGCTTTCAGATTTCCAAACGATAAAGGTGG
GAACATCGGAAGAatagggaaggagatggaagggacTTGGAGGACGCAAT
AAGGCCAATCATGTTCACTTTGCTGTTGTCGTCCCGCtcttcttgccctt
ctttCACAGCCCTAACTCCGATTCTCCTTCTTGCATTGCCCCTTGGAAGC
CTTATCATAACGCTTGTTATCATCACTTTGTATTTGCgacgggaagaaaa
aaggctTTCTCAGGCGATGCGagctcccctcctcgccgtggACGTTGAGC
AGGGGGGATAGGCTGCAATCGTGTGAATTTTCTTCCCCTAATGCTTCTTT
GGAAGCATGATGGAAAGGCCCAGCTTGTACGTTGGGACTTTAGGCGCCTC
GCCTGTGAACTTGACTGCCGATGAGAGCAGCCACCGAGTTTGCGAGTAGC
ACATGTACACTTGAAAGAgcacaaggaaaggaaaggaatagAAAAGACCT
ACTGCAAATT back to topCoding sequence (CDS) from alignment at KK037247.1:139600..141159+ >rna7932 ID=rna7932|Name=rna7932|organism=Nannochloropsis gaditana|type=CDS|length=2871bp|location=Sequence derived from alignment at KK037247.1:139600..141159+ (Nannochloropsis gaditana)
ATGTCTTCAGCTTCAGCAAACTACTTTTCTACAGCTATATTCGGTCAGAG
CCAAGAGAAAAGAACTCTTGTTTTGCCAGTCACTTCACCTGTGGGGgacc
tctcctcttcctcctgtccccccaCAACTCAGGGGAGCGGGTCGAAAAAT
GCCAACGGGCTGCCTTCAAAATCCGTCAATTCCACACCAGACGGCGGCAA
TTCTGATTTTAAAAATAAATAtacaccttttcctcccacaaCCCATtcaa
tttctccttcttcaccatCTCCACGCTTTCGGGACTGGCTTCGGCCATCC
AAAATGACGTCCTCAGTCTCTGCCCTTCTCGACGTGTGGATTCCATGGCT
GACCTACCTTGGGATAGGTATCGGAAGCGAAAACTTTGTAGTTGGAGGTC
TGGTTGCGGCAGGTGTGGCGATTGCGGGATTCATTTTCCAAGCTTTCCGG
TTCTACTACCAGAGGACTTTGCGGACTTGGCCGAAGCCACAAGCAGTAGG
AATCCTTATGACCTGGGTGGGCAACGCCGTATACGTATCTAGAATAGCTT
CCAACAAAGAGACAGCATCCCGATACACTCTCCTCGTCGTTATCACAGGT
GTAGTGCTGTCAAATTTCATCGCGATAGTCATGGGTCATCCAGCCTTACT
CGATGAAGCGAAAGAGCACGTGgcgagcgaggaagaggagaaacaccctc
tcttcctccggatGCATACCATCGCATCGTACGGCCTTCTCTTTCTGAGC
CTCCTGCAGTGGCCCTGCTTTTTCCTCGCGGCTTTCAGATTTCCAAACGA
TAAAGCCCTAACTCCGATTCTCCTTCTTGCATTGCCCCTTGGAAGCCTTA
TCATAACGCTTGTTATCATCACTTTGTATTTGCgacgggaagaaaaaagg
ctTTCTCAGGCGATGCGagctcccctcctcgccgtggACGTTGAGCAGGG
GGGATAGATGTCTTCAGCTTCAGCAAACTACTTTTCTACAGCTATATTCG
GTCAGAGCCAAGAGAAAAGAACTCTTGTTTTGCCAGTCACTTCACCTGTG
GGGgacctctcctcttcctcctgtccccccaCAACTCAGGGGAGCGGGTC
GAAAAATGCCAACGGGCTGCCTTCAAAATCCGTCAATTCCACACCAGACG
GCGGCAATTCTGATTTTAAAAATAAATAtacaccttttcctcccacaaCC
CATtcaatttctccttcttcaccatCTCCACGCTTTCGGGACTGGCTTCG
GCCATCCAAAATGACGTCCTCAGTCTCTGCCCTTCTCGACGTGTGGATTC
CATGGCTGACCTACCTTGGGATAGGTATCGGAAGCGAAAACTTTGTAGTT
GGAGGTCTGGTTGCGGCAGGTGTGGCGATTGCGGGATTCATTTTCCAAGC
TTTCCGGTTCTACTACCAGAGGACTTTGCGGACTTGGCCGAAGCCACAAG
CAGTAGGAATCCTTATGACCTGGGTGGGCAACGCCGTATACGTATCTAGA
ATAGCTTCCAACAAAGAGACAGCATCCCGATACACTCTCCTCGTCGTTAT
CACAGGTGTAGTGCTGTCAAATTTCATCGCGATAGTCATGGGTCATCCAG
CCTTACTCGATGAAGCGAAAGAGCACGTGgcgagcgaggaagaggagaaa
caccctctcttcctccggatGCATACCATCGCATCGTACGGCCTTCTCTT
TCTGAGCCTCCTGCAGTGGCCCTGCTTTTTCCTCGCGGCTTTCAGATTTC
CAAACGATAAAGCCCTAACTCCGATTCTCCTTCTTGCATTGCCCCTTGGA
AGCCTTATCATAACGCTTGTTATCATCACTTTGTATTTGCgacgggaaga
aaaaaggctTTCTCAGGCGATGCGagctcccctcctcgccgtggACGTTG
AGCAGGGGGGATAGATGTCTTCAGCTTCAGCAAACTACTTTTCTACAGCT
ATATTCGGTCAGAGCCAAGAGAAAAGAACTCTTGTTTTGCCAGTCACTTC
ACCTGTGGGGgacctctcctcttcctcctgtccccccaCAACTCAGGGGA
GCGGGTCGAAAAATGCCAACGGGCTGCCTTCAAAATCCGTCAATTCCACA
CCAGACGGCGGCAATTCTGATTTTAAAAATAAATAtacaccttttcctcc
cacaaCCCATtcaatttctccttcttcaccatCTCCACGCTTTCGGGACT
GGCTTCGGCCATCCAAAATGACGTCCTCAGTCTCTGCCCTTCTCGACGTG
TGGATTCCATGGCTGACCTACCTTGGGATAGGTATCGGAAGCGAAAACTT
TGTAGTTGGAGGTCTGGTTGCGGCAGGTGTGGCGATTGCGGGATTCATTT
TCCAAGCTTTCCGGTTCTACTACCAGAGGACTTTGCGGACTTGGCCGAAG
CCACAAGCAGTAGGAATCCTTATGACCTGGGTGGGCAACGCCGTATACGT
ATCTAGAATAGCTTCCAACAAAGAGACAGCATCCCGATACACTCTCCTCG
TCGTTATCACAGGTGTAGTGCTGTCAAATTTCATCGCGATAGTCATGGGT
CATCCAGCCTTACTCGATGAAGCGAAAGAGCACGTGgcgagcgaggaaga
ggagaaacaccctctcttcctccggatGCATACCATCGCATCGTACGGCC
TTCTCTTTCTGAGCCTCCTGCAGTGGCCCTGCTTTTTCCTCGCGGCTTTC
AGATTTCCAAACGATAAAGCCCTAACTCCGATTCTCCTTCTTGCATTGCC
CCTTGGAAGCCTTATCATAACGCTTGTTATCATCACTTTGTATTTGCgac
gggaagaaaaaaggctTTCTCAGGCGATGCGagctcccctcctcgccgtg
gACGTTGAGCAGGGGGGATAG back to top
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