rna7924, rna7924 (mRNA) Nannochloropsis gaditana

Overview
Namerna7924
Unique Namerna7924
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2319
Alignment locationKK037247.1:125910..127256 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100554g1.204.mrna
Orig protein idgnl|cribi|Naga_100554g1.204
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:125910..127256 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100554g1gene7676Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7924rna7924-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22770.1cds7902Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7924 ID=rna7924|Name=rna7924|organism=Nannochloropsis gaditana|type=mRNA|length=2319bp
ATGGGTAACGCCACAGCAATTTGCAGCGACAAGACTGGCACATTGACGGA
AAACCGGATGACGGTCACGCATTGCTATTTGGGAGATCTGGGCCCTCAAA
ACCGTCTGCCGCCGTCCCTCCCTCCCGCCCTCCTTCGGCTCTTGGGCGAC
GGGATCTCGCTGAACACGACGGCGAACCTGGACAAGGGAAGCCAGGACGG
GAGGGAGGACGCGGAGGAAGGCGGTGTCGGCGTGGGGCAGAACGGCCTCC
CCTCCCTCGGCTCTTCCTCCTCCCGCCTGCCCTCCTTCCTTCCCTCCCGC
CTGCCCTCCTTGCTCTCCTCCCTCTCCAAGCCGCCCGTGAAGATTTTGGG
GAACAAGACGGAAGGGGCACTCCTCCTCTTCGTGGATGCCTACAACGTGG
ACTATGACAAGGTGCGAGAGAATTACAGGGGATCCATCCAGTACAACCCT
TTCTCCTCCAAGCGGAAGAAGATGAGCGTCCTGGTCCCCGAGGGGGAGGG
CGGTGGGAAACAGAGGGTGCTCTATGTGAAAGGAGCAGCCGAACTGATCC
TGGCATCCTGCACCCACATTTGCGGTGCGGAGGACGGGAAGAGTAAGCCC
CTGGACGCGGAGAAACGGAAGGAATTGGAGGAGTATATCACCACGCTGGC
CAAGCAGAGCCTGCGGACGATGAGTTTGGCTCATCGGAGCATCGACCCCG
CCAGCCTGTCGAAAGGCAAAGCTGCCGGCTTCGGGGAAGGGGGAGGCGGG
GGGGTTGACCTAGATGAGCTGGAAGAAGGCTTGACGCTGGACGCGATAGT
GGGGATCACGGATCCCCTCCGACCCGAAGTCAGTGAGGCCGTGCGGGCCT
GTCAGAAAGCAGGTATCATGGTACGCATGGTCACGGGAGACAATGTGGAG
ACCGCCAAGGCCATTGCCCGACAATGCGGGATCCTCACCTCCTGCGGGAC
CGTGATGGAAGGCCCCGCCTTCCGCGCCCTGACGCCGAAGCAGCTGGACG
TCGTCCTCCCTTCCCTGCAAGTCTTGGCCCGTTCCTCGCCCGACGACAAG
CACACCCTGGTCGCCCGCTTGAACGGGACCTTGCCGGAGGACCAAGCCGA
GTGGGAAAAAGCCCACCCGGGAAAATCGTGGGAAAGGGAGCGGGACGGGC
TCTTGCCCGGGTACTTGGAGGAATGGGCCGTCTCCCGGGGAGGGGTCGGG
GAAGTGGTGGGGGTGACCGGAGACGGAACCAACGACGCACCGGCCTTGCG
GGTGGCGGACGTGGGCCTGTCGATGGGTTTGAGCGGCACCGAGGTGGCCA
AGGAGGCGTCGGACATTGTGATTATGGACGATAACTTCGCCAGCATTGTC
AAGGCGGTTCTGTGGGGCCGGGGGGTCTTTGACAACATTCGGAAATTTTT
GCAGTTTCAATTGACCGTCAATGTGGTCGCACTCACCATTACTTTCCTCT
CCGCCGTATCCGGGTATGACCCTCCCCTGAACGCGGTGATGATGCTGTGG
GTGAATTTGATCATGGACACCATGGGGGCGCTCGCCCTGGGAACAGAAGC
CCCCACTCCGAATTTGTTGGTGCGTCGTCCTTACAAGCGGAACGCCTCAC
TCATCTCCCGAACCATGTGGCGCAACATTTTGGTGCAATCCGGGTATCAA
ATCATCGTGCTGGTCCTCCTGCTACTCCGTGCGAACGACGTGCTGGCCTT
TGAGGGGTGGTGGGTGCACCGGCCCGGCGCTTCTCTTCCCGCCCCCATCG
AAATGGGCTCCACCCGACACATGACGTTGATCTTCAACGCTTTTGTCTTC
TGCCAAATTTTCAACGAGTTCAACGCCCGTTCCTTGGGCGACGACGTCAA
CATTTTGCGTGGCTTGGAAAAGAATCCGGTCTTTATCGGCATCATTTTCT
TCACGGTCGTGGTCCAATGGGTGGTTGTTCAATTCGGGGGAGAGTTCACC
AAAACGGCGCCCTTGAGCGCGGAGGAGTGGCGGGCCACGGTGCTGCTGGG
CATGTGCGCCATCCCCTTAGGTGTGGCCATGCGTTACTTGCCCGTGAGCG
AGAACCCGGACGATTTCGGAGGGACGGCAGAATCCGGCTTCGAAAACGTG
GAGCCGTCGGGGGACGCGAAGCAAGCCTTAGCCCAGGCGCCTGCCCTCTA
TCACGTCCATCACCACGGGGCTCGGCGACGGGCACAAGTGTGGCGGTGGC
TCGGCGTCCTTTTCCAATTGTCCGTCTTGCTGGTCGTGCCCGTGCTGGTG
GGCATTTGTGTAAAGGACCCGGAGCGTTGCCAATCCCTGGGGAATTTTCT
TGACTTCTACAAGTTTTAG
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protein sequence of rna7924

>rna7924-protein ID=rna7924-protein|Name=rna7924|organism=Nannochloropsis gaditana|type=polypeptide|length=116bp
MESKRVEQRVDEERHSVHAGGTNDSRSSEGRVQQGHGRNSKMLLPFMSKF
ECFELYDCPVQGLLLLAGTDLKKHGYRILRLDKRVPVNAHTPLSQVVSEE
PITYTAASWLLYLERL
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mRNA from alignment at KK037247.1:125910..127256-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7924 ID=rna7924|Name=rna7924|organism=Nannochloropsis gaditana|type=mRNA|length=1347bp|location=Sequence derived from alignment at KK037247.1:125910..127256- (Nannochloropsis gaditana)
ACGTAGATCCTTTCTACTCTGAACACCTTCAGTCCAGGTGGTTGATTTTC
CTCGCGAATCACAGCTGCAAACGGGATCATATAATTGTCTCGGGCTCTGG
GAACGTGCGAAGCTTTCCTTCAGTGCATCTAATCCATTCGACGATTTCCT
GGACGCATCCGCGTCTACTGTCTTGACAAAAAGTCATGGAGTCAAAGCGA
GTAGAGCAAAGGGTCGACGAAGAGCGCCATAGCGTCCACGCGGGGGGCAC
AAATGATTCGCGGAGTTCTGAGGGGAGGGTTCAACAGGGTCATGGAAGAA
ACAGTAAGATGCTGTTACCATGTAAGCTTTAAGTGGATTATTATACCTGC
GTCTTTCAACCCTATGTAATGTCATAGCACGAAGTAATGAACCCGATAAG
TGCTCTCGATTGTCTTTTATGTCTCGTGTGCTGACTTCCTACCACCTCCT
CACGCTGTCTCCAGTCATGTCCAAGTTTGAGTGCTTCGAGCTCTACGATT
GTCCCGTTCAGGGCCTGCTTCTACTGGCAGGGACGGATCTCAAGAAGGTG
AGTGGTGGGGAAATTGGCGTCTTTGCCGTGGATTGACCTGGCATTTATAC
CCGGCGCTGCATTCACGTAGGCTCCTGTGCGTACACACACATATATGTAT
ACATATACGCATTTGTCCCCCTGCTTTCAGTCACGCCCCGCGCCCCATAG
CCCTTGCACCCGCTGAATCTCCTTCAATGACATGGACGGTCCCGTGCTGA
AACCGATTTACCGTGTGTGGGTATGCTTGATGTTGATGTGCCCGTTTTGC
TTCCCTCCCCCCCTTCCCAGCATGGCTACAGAATCCTCCGCCTGGACAAA
CGGGTGCCTGTCAACGCCCATACCCCACTGAGTCAGGTGGTCTCGGAGGT
AGGCTGAAAAGGGGTGGGAAGGCGAAGGCCAGTGCTAACCCCCCACTGTC
TCCTTAAGAAATGGCCTCTTATATCTCCCAACGTCTCGACGGGTTTTTAG
GGTCTCTTGGACCCTCCCTCCCCATCACCCGACCCCGTCCACCCATGCTA
TGCCCGAATCTTCCTTTTGTCTTGCGCGTACAGCTGTCCCTGGTCGTAGC
CTCTGGTTTCTTTTTCCTTTGTTCTGACGCACGTCTCGTTCGTTGCCTCC
ACCTCCTTCCCTCCCTTTCTGTGGTCGCCCTCGTCCTCTTTACCTCCTCC
CTCCGCCGTCCTTCCCTTCTCATCCTCCCTCTTTGAATGCCCTGTCGCCT
CCTTCGTCTTGTCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCAGGAAC
CCATCACCTACACGGCAGCGTCGTGGTTGCTTTACCTCGAGAGACTT
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Coding sequence (CDS) from alignment at KK037247.1:125910..127256-

>rna7924 ID=rna7924|Name=rna7924|organism=Nannochloropsis gaditana|type=CDS|length=1392bp|location=Sequence derived from alignment at KK037247.1:125910..127256- (Nannochloropsis gaditana)
GAACCCATCACCTACACGGCAGCGTCGTGGTTGCTTTACCTCGAGAGACT
TCATGGCTACAGAATCCTCCGCCTGGACAAACGGGTGCCTGTCAACGCCC
ATACCCCACTGAGTCAGGTGGTCTCGGAGTCATGTCCAAGTTTGAGTGCT
TCGAGCTCTACGATTGTCCCGTTCAGGGCCTGCTTCTACTGGCAGGGACG
GATCTCAAGAAGATGGAGTCAAAGCGAGTAGAGCAAAGGGTCGACGAAGA
GCGCCATAGCGTCCACGCGGGGGGCACAAATGATTCGCGGAGTTCTGAGG
GGAGGGTTCAACAGGGTCATGGAAGAAACAGTAAGATGCTGTTACCATGA
ACCCATCACCTACACGGCAGCGTCGTGGTTGCTTTACCTCGAGAGACTTC
ATGGCTACAGAATCCTCCGCCTGGACAAACGGGTGCCTGTCAACGCCCAT
ACCCCACTGAGTCAGGTGGTCTCGGAGTCATGTCCAAGTTTGAGTGCTTC
GAGCTCTACGATTGTCCCGTTCAGGGCCTGCTTCTACTGGCAGGGACGGA
TCTCAAGAAGATGGAGTCAAAGCGAGTAGAGCAAAGGGTCGACGAAGAGC
GCCATAGCGTCCACGCGGGGGGCACAAATGATTCGCGGAGTTCTGAGGGG
AGGGTTCAACAGGGTCATGGAAGAAACAGTAAGATGCTGTTACCATGAAC
CCATCACCTACACGGCAGCGTCGTGGTTGCTTTACCTCGAGAGACTTCAT
GGCTACAGAATCCTCCGCCTGGACAAACGGGTGCCTGTCAACGCCCATAC
CCCACTGAGTCAGGTGGTCTCGGAGTCATGTCCAAGTTTGAGTGCTTCGA
GCTCTACGATTGTCCCGTTCAGGGCCTGCTTCTACTGGCAGGGACGGATC
TCAAGAAGATGGAGTCAAAGCGAGTAGAGCAAAGGGTCGACGAAGAGCGC
CATAGCGTCCACGCGGGGGGCACAAATGATTCGCGGAGTTCTGAGGGGAG
GGTTCAACAGGGTCATGGAAGAAACAGTAAGATGCTGTTACCATGAACCC
ATCACCTACACGGCAGCGTCGTGGTTGCTTTACCTCGAGAGACTTCATGG
CTACAGAATCCTCCGCCTGGACAAACGGGTGCCTGTCAACGCCCATACCC
CACTGAGTCAGGTGGTCTCGGAGTCATGTCCAAGTTTGAGTGCTTCGAGC
TCTACGATTGTCCCGTTCAGGGCCTGCTTCTACTGGCAGGGACGGATCTC
AAGAAGATGGAGTCAAAGCGAGTAGAGCAAAGGGTCGACGAAGAGCGCCA
TAGCGTCCACGCGGGGGGCACAAATGATTCGCGGAGTTCTGAGGGGAGGG
TTCAACAGGGTCATGGAAGAAACAGTAAGATGCTGTTACCAT
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Synonyms
Publications