rna7913, rna7913 (mRNA) Nannochloropsis gaditana

Overview
Namerna7913
Unique Namerna7913
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length949
Alignment locationKK037247.1:83889..84654 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102503g1.8368.mrna
Orig protein idgnl|cribi|Naga_102503g1.8368
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:83889..84654 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102503g1gene7664Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22782.1cds7891Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7913rna7913-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7913 ID=rna7913|Name=rna7913|organism=Nannochloropsis gaditana|type=mRNA|length=949bp
CACTGATGTTGCTCGATCCAGACAAGCTTTATCGCCTGCCCCTTCCTTTG
CCACTTTCCTCCGTCTGAACCCTCCCTTCCGCCCTCCCTCCCTCTTACCC
TCCCTCCCTCCCTCCCTCCTCAGACCCTCTCGATCACCCGCCATAAATCC
ACCGATGGCACCCTCTGGTGCGACAACGACTGTCCCTCAGACTTGAACGT
GGAGCTCTACTCCGCCGCCGTACAGGACCTCACTCATTTCGACATCACGC
AAGCGCGGAGCCTGTCCACCCTGTCCTGCGAAGGTCCTCAACCCAAAAAG
TACAAAGAAGGGGACTGATGAGCAGGGAAAGAGGGAGGGAAAGAGGGAGG
GAAAGAGGGAGGGAAAGAAAGAGGATGGGAAGGAGAAGACGTGCGAGAGG
AGACTTTTTCACAAGGGAAGGTCAAGAAGGCAAGGGATGGAGAAGTTGGT
AAAAAGGCGCGAAAAAGGCTGAAAATAACAATGACGCTCGTAAGGAGAAT
GTGGAAGGTAGTGAAAAAGAAAGAACGATTGAGTGGAGCGCACGTGGTCC
CAGGTTACGGAACATGTGGTGGGAAGGAGAAGCGGGAACGTTCAATGATC
GTAAAGGTAGGGGTAGTATTTAAAAGGGCGCGAAGCATGCAAACGGGTCC
AAAAAGGGCCCCAGCCTGGCCAATCAGTGGCTGTTTCGGGGGGGAAGCGA
AGGAGGATCTCAAAGTAACGATTGAAAAACTCCGAGACAGTAATGGTCCA
CACTCCGAGATGGTAACGGTCGAGACCACCTGAGCATGTGTTGGAGAACT
TCGAAAATTTTGAACATGCATTGATAAAACCAGCGATTGGTTTGAGACGA
ATATGTAGCATCGGCTATTTGACAGTTGACACTTTTTGCTTTTTGGATGG
TGGTTTTACGCGCCCGTTGTGCGAGGCCTGCGAAAATATTGCTTATTGA
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protein sequence of rna7913

>rna7913-protein ID=rna7913-protein|Name=rna7913|organism=Nannochloropsis gaditana|type=polypeptide|length=152bp
MKGEGLVMRMEWGDEAGGVCDEYGVRNEGRGACDEDGVRNEGGGLVMRLE
WGVKGEECVMRMEWGDENRSRGDGMRMEWGDDGGMKGCDGEGGRHYARRK
SALRGDADGVQRRKGLGVGNDVIGVKWWRRRKSKEARRVWRKACPPTFLC
PS
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mRNA from alignment at KK037247.1:83889..84654-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7913 ID=rna7913|Name=rna7913|organism=Nannochloropsis gaditana|type=mRNA|length=766bp|location=Sequence derived from alignment at KK037247.1:83889..84654- (Nannochloropsis gaditana)
CCCAGTGATCGGCCGCTCCAAGTTCGTCGGTCTCCCCCTCGCGCTTCTCC TTCTGGGCAGGGACGCCAGCGTGAGCATCGTCCACAGCAAGACACCGAAG GAGGAGGTGGAGGCCTTGTGCCGGGAGTCGGACATTGTGGTGGGCGCGGT GGGTATCCCACGCTTGATTCAACCGGGGTGGATCAAGAAAGGTATGGGGG CCGGGCTGTGTGATGAGGATGGAGTGGGGCAATGATGCAGGTGGGGTTTG TGATGGGGAAGGAGTGGGGCGATGAAGCAGGTGGGGGTTGTGATGGGGAA GGAGTGAGGGATGAAGGGAGAAGGGCTTGTGATGAGGATGGAGTGGGGTG ATGAAGCAGGTGGGGTTTGTGATGAGTATGGCGTGAGAAATGAAGGGAGA GGGGCTTGTGATGAGGATGGAGTGAGAAATGAAGGAGGAGGGCTTGTGAT GAGGTTGGAGTGGGGGGTGAAGGGAGAGGAGTGTGTGATGAGGATGGAGT GGGGCGATGAAAATAGGAGTCGGGGCGATGGAATGAGAATGGAATGGGGC GATGATGGAGGGATGAAGGGTTGTGATGGGGAGGGAGGGAGACATTATGC CCGACGAAAAAGTGCGCTTCGAGGTGATGCGGATGGAGTGCAAAGGAGGA AAGGACTAGGGGTAGGCAATGATGTAATTGGAGTCAAGTGGTGGAGAAGG CGGAAAAGCAAGGAGGCGAGGAGAGTCTGGAGGAAAGCATGTCCCCCCAC ATTTTTGTGTCCCTCC
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Coding sequence (CDS) from alignment at KK037247.1:83889..84654-

>rna7913 ID=rna7913|Name=rna7913|organism=Nannochloropsis gaditana|type=CDS|length=456bp|location=Sequence derived from alignment at KK037247.1:83889..84654- (Nannochloropsis gaditana)
ATGAAGGGAGAAGGGCTTGTGATGAGGATGGAGTGGGGTGATGAAGCAGG
TGGGGTTTGTGATGAGTATGGCGTGAGAAATGAAGGGAGAGGGGCTTGTG
ATGAGGATGGAGTGAGAAATGAAGGAGGAGGGCTTGTGATGAGGTTGGAG
TGGGGGGTGAAGGGAGAGGAGTGTGTGATGAGGATGGAGTGGGGCGATGA
AAATAGGAGTCGGGGCGATGGAATGAGAATGGAATGGGGCGATGATGGAG
GGATGAAGGGTTGTGATGGGGAGGGAGGGAGACATTATGCCCGACGAAAA
AGTGCGCTTCGAGGTGATGCGGATGGAGTGCAAAGGAGGAAAGGACTAGG
GGTAGGCAATGATGTAATTGGAGTCAAGTGGTGGAGAAGGCGGAAAAGCA
AGGAGGCGAGGAGAGTCTGGAGGAAAGCATGTCCCCCCACATTTTTGTGT
CCCTCC
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Synonyms
Publications