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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100349g5.4136.mrna |
| Orig protein id | gnl|cribi|Naga_100349g5.4136 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:64740..67744 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7906 ID=rna7906|Name=rna7906|organism=Nannochloropsis gaditana|type=mRNA|length=885bp
CGGATGGCGTACGGGGAGGTCTCAGCATTGGCTCCTGACGCGTTCTCATT
CGCTTTCCTTGCTTGCCTGACAGGGGGGATGACGACAGCGAGGATGAGGA
AATGGGACCCCGCCCGCTGGACGATGGAATGGAGGGAGGGAGGGAGGGAG
GCCAGGGCCGGAGTTTCGGAGGGGCGTTGATGCCGGGGGAGGTGAGGGAG
GGATGGAGGGGGGGAGGGATGGAGGGAAGGAAGGGAAGGGGTATGGGATA
TTAAGTCAAGCCGTGGATGGGGAATCATTATTCATTCGGCCACGGATCTC
CTCATCCAATTCTCCCTTTCCTCCCTCTCTCCCTCCCGCCCTCCCTTGAT
CCCTTCCTCAGGGCGAGGCCATCGCCCAGTACGCAGAGAAGAACATGCGC
ATCCCTCGGCGAGGGGAGGTAGGATGGCAGGGGGAGGAGATCGAGCGCTT
GGAGTCTTTGGGTTACGTGATGAGTGGCAACCGGCACAAGCGGATGAACG
CCATTCGTATCCGCAAAGAGAACCAGGTCTATACAGCCCTGGAGAAGAAG
GCTTTAGCGCTCATTCAGCTCGAGGAGAACAAACAGAAGGAAGCGACCTT
ACTGGCAAATTTCCGACAAGCATTGGAAAAGCGGAAAGAGAAAGAGGGGG
AGGGGGAAAATGTGGATGAGGTTTGAATGGAAGACATGTGCACAAGTGAT
TGATGAAGGGTGGTAGAAGGGTAAGGCGATAGGGATGCTGAACGGTTTGG
AGGTAGCACCACCTCGACCGAATGCAGATCCGTGAGCTTTAGATAGCCAT
GAAAGAAAAGTGCGAATTGTCTTGGCACGTTTTACGACGTAGCGTCTTTG
TAGCCTTTGATTATTTCTTTAAGTGACGCATGAGC back to topprotein sequence of rna7906 >rna7906-protein ID=rna7906-protein|Name=rna7906|organism=Nannochloropsis gaditana|type=polypeptide|length=728bp
MDLENCRDFIIFLTRYTRIRFSIFMKDSPTPPLEHLPSEHLSAADAIAHN
DRRDKMPPKPYLSIHRLPHPPAPLIFVLRLSTLLLCMAALLIISSSTPGI
TVLIQGLICIFGAILSCQAAAYLERIHSGLEQQHDEEISVALRSGPKRIS
FVTSPPRSTTRLPVTRITFPQDLAHAEENGEENHHQNTSLHHMAGRGRGR
EAEEGRGKVVEEEEVVVPQGDHGVAGQHGCGWGHYQDYAEDREKGRGGGA
AWDQGGEDPVLPLPAPTVLPPSFPSSLPPSLPPHNRLSRDKRLTFLHSLS
AVLLFVDALWVFSLAGTAFSRPPSFPPSPPASDAPSSLRTRGRGRGGEEG
ILRVVLLCVIGILCLVASGAAVGATLRVRFYGGLRGCEGEVAVEGKEAGN
AARHRLSSGSGMKEGGAGAKEKGEGRKQDQEEEEGREDGAEAGGWTVIGI
HDGPIPGEERAGDEREEEAREGGREGRQLSSCLQLQAASGPAFPSLPSSL
FAGYPFRVPFEGKAAAVQGRPSPAFASNTTATPSAIAAQAALGACGPGKK
GRIPSSRLPPPCRQRSSSWEDDAKPAMAPVALVKETSPRDTTNLLYGASE
DIREEETLAVPTPLSSHRFPRSADTSTVQEGQDAPGTPTLCPDLALGSLG
PKSLRRSSSFVLPTSTTRGALPLHLPPPPRSASFVLAPAPSPGNNQGMRA
PTAERETRGLPLAVAMDARLVMRVPLRT back to topmRNA from alignment at KK037247.1:64740..67744+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7906 ID=rna7906|Name=rna7906|organism=Nannochloropsis gaditana|type=mRNA|length=3005bp|location=Sequence derived from alignment at KK037247.1:64740..67744+ (Nannochloropsis gaditana)
CTTTTTGATAGATCAACCTTGCCACAAGAGTCTACGAAGCCTGCATACAG
GACCGGCGGCTTCAAGCGAAGTGGGAGACAATATCCTTGTGCGCATAGCA
GCGGTACAGTCTATGTTGCGCGGTTGGTGCGTAGGCATAAGTGGGTTTAT
TGCCCCTGAAATGCTTTCCGACACTGGCGGCGGGAGAGATCCTCAACATG
ACATATCGTTGCACTTCCAGACAACCAAGGCACCCACCCCTCGTGCATGA
TGTCGACCACAAAACTTGAATTGATATGAATGAACACCATATTGTGCACA
CGGGCCTTTCGGATGGATCGTGGCGACCAAAAAGGGCCTGGCTCGGATTT
ACGTGTTGTGGTGACGGACATCGATCTTGTTCCGTCCCCTGTACGTGGCA
CTGAAGCCTATCACTGAAGCCTATTACTATCAATATTTCCCTGCCATGAC
ACAAGCGACAAAATGGACCTAGAAAACTGTCGGGATTTCATAATATTTCT
GACACGTTATACTCGGATTCGATTCAGTATTTTCATGAAAGACAGTCCGA
CTCCCCCTTTGGAGCACCTGCCTTCAGAACACTTGAGTGCGGCGGATGCC
ATCGCACACAACGACCGCCGGGATAAAATGCCTCCCAAACCATACTTAAG
CATCCATCGCTTACCCCACCCCCCGGCTCCATTAATTtttgtccttcgcc
tctccaCCTTGCTTCTGTGCATGGCCGCACTTTTAAttatttcctcttcc
acgccggGGATCACTGTACTGATTCAAGGACTTATTTGCATCTTCGGCGC
CATTTTGTCTTGCCAAGCGGCCGCGTACCTTGAAAGAATCCACTCTGGGC
TGGAACAGCAGCACGATGAAGAGATTTCCGTGGCCCTGCGCTCAGGCCCC
AAGCGCATCTCCTTCgtaacctcccctccacgaTCGACGACCAGGCTGCC
CGTAACGCGGATAACCTTCCCACAAGATCTCGCTCACGCAGAAGAGAATG
GGGAAGAGAATCATCATCAGAATACTTCACTCCACCACATGGCGGGGCgt
ggcaggggaagggaggcggaggaagggagagggaaggtggtggaggagga
ggaggtggtcgtTCCCCAGGGGGACCACGGCGTGGCAGGACAACATGGGT
GTGGGTGGGGGCACTACCAGGACTATgcggaggacagggagaaaggacgg
ggtgggggagcTGCATGGGatcagggaggggaggatccAGTCCTGCCACT
CCCCGCGCCGACagtcctgcctccttccttcccttcctccctccctccct
cccttcctccccataaTCGTCTTTCCCGCGATAAGCGATTGAccttcctc
cattctctATCCGCCGTCCTACTTTTCGTCGACGCCCTCTGGGTCTTTAG
CCTCGCGGGGACCGCTTTctctcgacctccctccttcccgccctcccccc
ctgcctcggatgccccttcctccctccgaacgcggggaagaggaaggggc
ggggaagagggtatTCTCCGGGTAGTCTTGCTCTGTGTGATTGGAATCCT
GTGCCTCGTTGCCAGTGGGGCTGCCGTTGGTGCTACCTTGCGTGTCAGAT
TTTATGGGGGACTGAGGGGATGTGAAGGCGAGGTGgccgtggaagggaag
gaggcgggaaacgcAGCACGGCACCGGCTTTCGTCTGGAtcggggatgaa
ggagggaggcgcgggagccaaggaaaagggggagggaaggaagcaggacc
aggaggaggaggaggggagggaggacggggcggaggcgggggggtggACA
GTCATTGGGATTCATGACGGACCTATTCCCGGCGAGGAACGTGCAGGAga
cgaaagagaggaggaagcgagggagggcgggagggagggcaggcagCTGT
CTTCGTGCCTGCAACTTCAAGCGGCCTCGGGcccggctttcccctccctt
ccctcttccctcttcgccgGGTACCCGTTCCGCGTGCCGTTCGAGGGGAA
AGCCGCAGCAGTCCAGGgacgcccctcccccgccttcgcaAGCAACACAA
CCGCCACACCCTCAGCAATCGCTGCACAAGCAGCCTTGGGAgcgtgtgga
ccgggaaagaaggggaggatccCCTCCAGCCGGCTGCCCCCGCCTTGTCG
CCagcgttcttcctcctgggaggacgacgcAAAGCCCGCCATGGCACCAG
TAGCCTTGGTTAAGGAAACTTCACCCCGGGATACCACCAACCTTCTGTAT
GGGGCCTCCGAGGATattcgggaggaagaaacgcTTGCTGTTCCTACCCC
TCTCTCGTCTCACCGCTTCCCACGGAGCGCCGACACCTCAACCGtccagg
aggggcaggacgcTCCAGGCACGCCCACCCTCTGCCCCGACCTCGCCCTT
GGCAGCCTTGGGCCCAAGAGTCTCcggcgctcctcctctttcgtccttcc
cacctctaCCACGCGCGGTGCACTCCCTCTGcaccttcccccaccccccc
ggtcggcctccttcgtcctcgcacccgccccttcccctggcaACAACCAA
GGCATGCGGGCTCCGACCGCTGAAAGGGAAACAAGGGGGCTACCACTGGC
GGTAGCCATGGATGCACGGTTAGTCATGCGCGTCCCGCTACGGACCTGAG
GAAAATGCACGCCTCGACCGTCACCAGCCGTTAACTGTTTGAATTTGAAA
AGAGAAAGCCACAGCCTCCACCGATGGGCGTTGGGAGTGGTGGGGTACGG
GTGGAGTGTATATGTCTGTGAGCGGAAGGCTGGAGCCAGCGCCTGGAGCT
CTTTGTCTTTGGGAATGGGATGTCACCTGGAGGTGATCGGTACGCCGGAA
CCCCTGTGACGGGCAACAGCCTATACTCGACGTGCCCCGGTCGGGGTGTG
ACTGTGGAATGAGGGTCTCCCCACCTCAAAGCATGCGACGCCCGCCTTGT
AAAGAGCACGGGTACTTTGAAAATAAAAGGGGCGTCTGACAGATACTCCA
CGGCC back to topCoding sequence (CDS) from alignment at KK037247.1:64740..67744+ >rna7906 ID=rna7906|Name=rna7906|organism=Nannochloropsis gaditana|type=CDS|length=2187bp|location=Sequence derived from alignment at KK037247.1:64740..67744+ (Nannochloropsis gaditana)
ATGGACCTAGAAAACTGTCGGGATTTCATAATATTTCTGACACGTTATAC
TCGGATTCGATTCAGTATTTTCATGAAAGACAGTCCGACTCCCCCTTTGG
AGCACCTGCCTTCAGAACACTTGAGTGCGGCGGATGCCATCGCACACAAC
GACCGCCGGGATAAAATGCCTCCCAAACCATACTTAAGCATCCATCGCTT
ACCCCACCCCCCGGCTCCATTAATTtttgtccttcgcctctccaCCTTGC
TTCTGTGCATGGCCGCACTTTTAAttatttcctcttccacgccggGGATC
ACTGTACTGATTCAAGGACTTATTTGCATCTTCGGCGCCATTTTGTCTTG
CCAAGCGGCCGCGTACCTTGAAAGAATCCACTCTGGGCTGGAACAGCAGC
ACGATGAAGAGATTTCCGTGGCCCTGCGCTCAGGCCCCAAGCGCATCTCC
TTCgtaacctcccctccacgaTCGACGACCAGGCTGCCCGTAACGCGGAT
AACCTTCCCACAAGATCTCGCTCACGCAGAAGAGAATGGGGAAGAGAATC
ATCATCAGAATACTTCACTCCACCACATGGCGGGGCgtggcaggggaagg
gaggcggaggaagggagagggaaggtggtggaggaggaggaggtggtcgt
TCCCCAGGGGGACCACGGCGTGGCAGGACAACATGGGTGTGGGTGGGGGC
ACTACCAGGACTATgcggaggacagggagaaaggacggggtgggggagcT
GCATGGGatcagggaggggaggatccAGTCCTGCCACTCCCCGCGCCGAC
agtcctgcctccttccttcccttcctccctccctccctcccttcctcccc
ataaTCGTCTTTCCCGCGATAAGCGATTGAccttcctccattctctATCC
GCCGTCCTACTTTTCGTCGACGCCCTCTGGGTCTTTAGCCTCGCGGGGAC
CGCTTTctctcgacctccctccttcccgccctccccccctgcctcggatg
ccccttcctccctccgaacgcggggaagaggaaggggcggggaagagggt
atTCTCCGGGTAGTCTTGCTCTGTGTGATTGGAATCCTGTGCCTCGTTGC
CAGTGGGGCTGCCGTTGGTGCTACCTTGCGTGTCAGATTTTATGGGGGAC
TGAGGGGATGTGAAGGCGAGGTGgccgtggaagggaaggaggcgggaaac
gcAGCACGGCACCGGCTTTCGTCTGGAtcggggatgaaggagggaggcgc
gggagccaaggaaaagggggagggaaggaagcaggaccaggaggaggagg
aggggagggaggacggggcggaggcgggggggtggACAGTCATTGGGATT
CATGACGGACCTATTCCCGGCGAGGAACGTGCAGGAgacgaaagagagga
ggaagcgagggagggcgggagggagggcaggcagCTGTCTTCGTGCCTGC
AACTTCAAGCGGCCTCGGGcccggctttcccctcccttccctcttccctc
ttcgccgGGTACCCGTTCCGCGTGCCGTTCGAGGGGAAAGCCGCAGCAGT
CCAGGgacgcccctcccccgccttcgcaAGCAACACAACCGCCACACCCT
CAGCAATCGCTGCACAAGCAGCCTTGGGAgcgtgtggaccgggaaagaag
gggaggatccCCTCCAGCCGGCTGCCCCCGCCTTGTCGCCagcgttcttc
ctcctgggaggacgacgcAAAGCCCGCCATGGCACCAGTAGCCTTGGTTA
AGGAAACTTCACCCCGGGATACCACCAACCTTCTGTATGGGGCCTCCGAG
GATattcgggaggaagaaacgcTTGCTGTTCCTACCCCTCTCTCGTCTCA
CCGCTTCCCACGGAGCGCCGACACCTCAACCGtccaggaggggcaggacg
cTCCAGGCACGCCCACCCTCTGCCCCGACCTCGCCCTTGGCAGCCTTGGG
CCCAAGAGTCTCcggcgctcctcctctttcgtccttcccacctctaCCAC
GCGCGGTGCACTCCCTCTGcaccttcccccacccccccggtcggcctcct
tcgtcctcgcacccgccccttcccctggcaACAACCAAGGCATGCGGGCT
CCGACCGCTGAAAGGGAAACAAGGGGGCTACCACTGGCGGTAGCCATGGA
TGCACGGTTAGTCATGCGCGTCCCGCTACGGACCTGA back to top
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