rna7896, rna7896 (mRNA) Nannochloropsis gaditana

Overview
Namerna7896
Unique Namerna7896
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length333
Alignment locationKK037247.1:54197..54493 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100178g2.3212.mrna
Orig protein idgnl|cribi|Naga_100178g2.3212
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:54197..54493 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100178g2gene7648Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22807.1cds7874Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7896rna7896-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7896 ID=rna7896|Name=rna7896|organism=Nannochloropsis gaditana|type=mRNA|length=333bp
ATGCTCAAAGTGAAGTTGGCAAAGAAAGTGGAGAGGGCCGATGCAGCCTT
AGCATGTAGTCGGACGCCAAGGCATGCAACAGAACTTTGTACCGAGCCAG
AAAATACTTTCGATCAACCGAAGCTGGAAATCGTCCGCTTGCAGGGACAG
TTGCGGCAAGCGGGATCGAAGCTCATATGCGCCCGTCTTCTGAAGTACAG
AAGCTATATGATTGTTCCTACCGTCTGGGATGTCAATGTACCTGGAGGCT
TTCGCTCTAACATCTTAATCTTCGTCCTCAGCAAATCTCAATGGGGTGCT
GAAGCCTGCTTTGCCCTTGATTGCCCATGGTGA
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protein sequence of rna7896

>rna7896-protein ID=rna7896-protein|Name=rna7896|organism=Nannochloropsis gaditana|type=polypeptide|length=98bp
MLVSEGAKSAADKIDARILIVNLVKTQCAQALMEGENTQHSSKPGFCARC
RMNSWAGLLLYQLLAEVGMLVKQEPLSSCDRFESRPLRIVALLTRKWN
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mRNA from alignment at KK037247.1:54197..54493-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7896 ID=rna7896|Name=rna7896|organism=Nannochloropsis gaditana|type=mRNA|length=297bp|location=Sequence derived from alignment at KK037247.1:54197..54493- (Nannochloropsis gaditana)
ATGCTGGTTTCAGAGGGAGCCAAATCAGCGGCTGACAAAATCGACGCCAG
GATCCTGATTGTGAATCTTGTAAAAACTCAATGTGCTCAGGCGCTAATGG
AGGGAGAAAATACCCAGCATTCATCTAAGCCTGGATTCTGTGCACGATGT
CGAATGAATTCTTGGGCCGGTCTTCTGCTGTATCAGCTCCTCGCGGAAGT
CGGAATGCTCGTAAAACAGGAGCCTCTGAGCTCCTGTGATAGATTTGAAT
CTCGTCCTTTGCGCATAGTAGCGCTCCTTACAAGGAAATGGAATTGA
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Coding sequence (CDS) from alignment at KK037247.1:54197..54493-

>rna7896 ID=rna7896|Name=rna7896|organism=Nannochloropsis gaditana|type=CDS|length=297bp|location=Sequence derived from alignment at KK037247.1:54197..54493- (Nannochloropsis gaditana)
ATGCTGGTTTCAGAGGGAGCCAAATCAGCGGCTGACAAAATCGACGCCAG
GATCCTGATTGTGAATCTTGTAAAAACTCAATGTGCTCAGGCGCTAATGG
AGGGAGAAAATACCCAGCATTCATCTAAGCCTGGATTCTGTGCACGATGT
CGAATGAATTCTTGGGCCGGTCTTCTGCTGTATCAGCTCCTCGCGGAAGT
CGGAATGCTCGTAAAACAGGAGCCTCTGAGCTCCTGTGATAGATTTGAAT
CTCGTCCTTTGCGCATAGTAGCGCTCCTTACAAGGAAATGGAATTGA
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Synonyms
Publications