rna7895, rna7895 (mRNA) Nannochloropsis gaditana

Overview
Namerna7895
Unique Namerna7895
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length717
Alignment locationKK037247.1:53650..54163 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100178g3.3207.mrna
Orig protein idgnl|cribi|Naga_100178g3.3207
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:53650..54163 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100178g3gene7647Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7895rna7895-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22802.1cds7873Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7895 ID=rna7895|Name=rna7895|organism=Nannochloropsis gaditana|type=mRNA|length=717bp
ATGAAAGTTCTCCAGAAAAGGTTCTGGCAGGAGCCGCTCGAGCCTATTTG
GCAATATCGAGGAAAGTACTATCTCGGCAAGACCAATGATGTCGAAGACA
AAGACCAAGTGACTCCGTTTTTCCTTGCAAACTTCGTCAATGCCTCTGAT
CCGGCCGTGTACAAGCGTAAAATATACATTGACTTGGGGATCAAAGATTT
CTACAGCAGTTTGTGCTGGATTATGCAGAATTATCCGGTGAAGTTTGACG
CCATACATGGCTTTGAGTGCGCGAGTGATCTCAGCAATGTAGCAGCCCTC
AGCAGTCAAATTGACGCGTGTGTCCGTGAATCGGCGGCTGATTTGAAACA
AGGCTACACACCCGAAGGTGTCAAGGATATACTTCACATCTATTATGACT
ACATTGGTACCGACGAGAATCCAGCAACGCAACCACCGACGCGTGGTCTG
AGTCAGGTCATGAAGGACTTGAATATCGAGAAGGATGACTACGTGGTGGT
AAAGATGGACGTGGAAGAGATGGAATACGCGCTCATAGACAAGATTATTG
CTGATGGCACCTATAAGCTGATTGACGAGATGTTTGTCGAAATCCATTAC
AACCATCCAGAGATGCGCAAGTTTGGTTGGCAAATGTTTCATAAATCACG
AAACGACGCGCAAGCACTCTTCACGAAAGCAAGGGACGTAGGCATGTACA
TCCATCCTTGGCCCTGA
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protein sequence of rna7895

>rna7895-protein ID=rna7895-protein|Name=rna7895|organism=Nannochloropsis gaditana|type=polypeptide|length=110bp
MLKVKLAKKVERADAALACSRTPRHATELCTEPENTFDQPKLEIVRLQGQ
LRQAGSKLICARLLKYRSYMIVPTVWDVNVPGGFRSNILIFVLSKSQWGA
EACFALDCPW
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mRNA from alignment at KK037247.1:53650..54163-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7895 ID=rna7895|Name=rna7895|organism=Nannochloropsis gaditana|type=mRNA|length=514bp|location=Sequence derived from alignment at KK037247.1:53650..54163- (Nannochloropsis gaditana)
ATGCTCAAAGTGAAGTTGGCAAAGAAAGTGGAGAGGGCCGATGCAGCCTT
AGCATGTAGTCGGACGCGTGATGAAGCGGGCATAGGGTAATTCGCCATCA
AACGGACGAGGCTATTTAGCAAGGCATGCAACAGAACTTTGTACCGAGCC
AGAAAATACTTTCGATCAACCGAAGCTGGAAATCGTCCGCTTGCAGGGAC
AGTTGCGGCAAGCGGGATCGAAGCTCATATGCGCCCGTCTTCTGAAGTAC
AGAAGCTATATGATTGTTCCTACCGTCTGGGATGTTATCTAAATTAGAAG
TATGTGCGGAAAAGAGCGCCTGTACAGGAGCTTTTCCCTTTCTAATCGGA
CTTTCACCTTGAATATTACCTTGAACTAATATAATCATTCTTATATCATT
GACATTTTTCAGGTCAATGTACCTGGAGGCTTTCGCTCTAACATCTTAAT
CTTCGTCCTCAGCAAATCTCAATGGGGTGCTGAAGCCTGCTTTGCCCTTG
ATTGCCCATGGTGA
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Coding sequence (CDS) from alignment at KK037247.1:53650..54163-

>rna7895 ID=rna7895|Name=rna7895|organism=Nannochloropsis gaditana|type=CDS|length=999bp|location=Sequence derived from alignment at KK037247.1:53650..54163- (Nannochloropsis gaditana)
GTCAATGTACCTGGAGGCTTTCGCTCTAACATCTTAATCTTCGTCCTCAG
CAAATCTCAATGGGGTGCTGAAGCCTGCTTTGCCCTTGATTGCCCATGGT
GACAAGGCATGCAACAGAACTTTGTACCGAGCCAGAAAATACTTTCGATC
AACCGAAGCTGGAAATCGTCCGCTTGCAGGGACAGTTGCGGCAAGCGGGA
TCGAAGCTCATATGCGCCCGTCTTCTGAAGTACAGAAGCTATATGATTGT
TCCTACCGTCTGGGATATGCTCAAAGTGAAGTTGGCAAAGAAAGTGGAGA
GGGCCGATGCAGCCTTAGCATGTAGTCGGACGCGTCAATGTACCTGGAGG
CTTTCGCTCTAACATCTTAATCTTCGTCCTCAGCAAATCTCAATGGGGTG
CTGAAGCCTGCTTTGCCCTTGATTGCCCATGGTGACAAGGCATGCAACAG
AACTTTGTACCGAGCCAGAAAATACTTTCGATCAACCGAAGCTGGAAATC
GTCCGCTTGCAGGGACAGTTGCGGCAAGCGGGATCGAAGCTCATATGCGC
CCGTCTTCTGAAGTACAGAAGCTATATGATTGTTCCTACCGTCTGGGATA
TGCTCAAAGTGAAGTTGGCAAAGAAAGTGGAGAGGGCCGATGCAGCCTTA
GCATGTAGTCGGACGCGTCAATGTACCTGGAGGCTTTCGCTCTAACATCT
TAATCTTCGTCCTCAGCAAATCTCAATGGGGTGCTGAAGCCTGCTTTGCC
CTTGATTGCCCATGGTGACAAGGCATGCAACAGAACTTTGTACCGAGCCA
GAAAATACTTTCGATCAACCGAAGCTGGAAATCGTCCGCTTGCAGGGACA
GTTGCGGCAAGCGGGATCGAAGCTCATATGCGCCCGTCTTCTGAAGTACA
GAAGCTATATGATTGTTCCTACCGTCTGGGATATGCTCAAAGTGAAGTTG
GCAAAGAAAGTGGAGAGGGCCGATGCAGCCTTAGCATGTAGTCGGACGC
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Synonyms
Publications