rna7886, rna7886 (mRNA) Nannochloropsis gaditana

Overview
Namerna7886
Unique Namerna7886
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1329
Alignment locationKK037247.1:22821..24103 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101867g1.6927.mrna
Orig protein idgnl|cribi|Naga_101867g1.6927
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:22821..24103 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101867g1gene7639Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7886rna7886-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22809.1cds7864Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7886 ID=rna7886|Name=rna7886|organism=Nannochloropsis gaditana|type=mRNA|length=1329bp
CGCGGGCCCAAGAGCTGATGATGAGGGAGAAGAGGGAAGATCCAGTGGTG
CCGAGCCATGTGCATGAGATGGCGAATCTGATATACGCCCTGGGATTGCT
TTTTAAGGGAGGAGGGTGGACAGAGGGGGGGAAGGGAGAAGGAGGAAGTC
GGAGCCGGCAAAGGGAAATTATGTTGGAGGCAGTTTTGGCCTGGGAAACG
GAGATGTCACCCTCATGGGTGGCTTCTTCTCCTTCTCTCTCCTCTTCTCC
CTCCTCCTCTTCCTCTTCCTCCTCCTTTTCCTCCTCCTCCTTCTCCTCCT
CCTCCTTCTCCTCATCCTCTTCCTTCACCTCCTCCTCCCCACCCCCTGCT
CCCCTTATCGATCCGCTTTGTTGGGCAAAGATTCCTTGGGGGCACTCGCC
ACGCTTTCCCTCCCTCCCTCCCTTACGTCCTCCCTCCCTCCCTCCCTCCC
TCCCTCGACTCGCACGCGTTGGGTCCACCTGACCACCTCCCTTCTCCCAG
CCATGCACTTGTTCACCCTGTGGGCGATCGTCGAAGCCAGCATCGCCCTG
GACCTGTGGGACGGTAAAGAGGGGATGGAAGAAGGCACAGAGGAAGCTGC
GCGAATCCTCGTGGAAAAGGCGCGAACCCTGCTGCCAAAACTGGTGAGGA
AAGCTAAGGTGAGGGCCCGGGCGATGGGAGCACGGGGACAAGGGGAGAGG
AGAGTGGAAGGGAAGGTGGGCTGGGTGAGGAAGGAGGTGGAGGAGGGACT
GAGACGCATAGAGGAGATGATGGCGCGCTAGCGGGCCCAGGAGGAAACTT
TGAGGACGGATGGACAGGAAGGGGGGGAGGGAGAGGTGGAGGACAAGAAG
GGAGGAGGCCGGGGAGGAGGAAAGGGAGGAGATTGAGAAGGCATGGGCGA
AGGAGATAATGGTGAAGGCACGACTACGAGACTGAGAAGGATCATGGGAG
GAAGCGGGTCATGGAAGGGAACAAGTAAGGAAAAGGTTAGACGACTGAGT
GGAAGACTGGTGCGACGTGGATATGGGCCAAGAAGAGCTGGTTTGTGTCG
AGGCATACTGTGGCAGGCTGTATATAGGATCGAGTGCGTGTGCAGGGAGG
GTGGAAGAAGGTGCCATGAGTAGTGTTGCAGAGGTGCTTGGGGTAGTGAG
TGGATGTAAATGGAGGGAAGACGGCGATTTGCGAATTTGACAGGATCTCG
TGAGAAGGCCTGCGGGATGGGTGACATGGATGATTAGCTTGGAGTGATCA
CCGCTTGTTTTGGCGCTTCTTTTCGACAAAGGCATTAATCCGACGCAAGA
AAGCAATAACATGACGGCAATACATGTGA
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protein sequence of rna7886

>rna7886-protein ID=rna7886-protein|Name=rna7886|organism=Nannochloropsis gaditana|type=polypeptide|length=343bp
MRCSGAEPGLLCLSSFLLLSSSSSSSSSSSSSSSSLSIFSPSAEDVVFLA
EGFVSYLKQPSLSPSSSSSSSSSSPPSFISFPAISRTTSSPSPSIPAATT
SQGRIPTSSPLLLPPSLLRAHGVFSSLLSSSRASSWQPSHRRRLRRLLSQ
IRRAGGREGRKEKPLPRSPTLHHAVLRAGSVGEIRNVMQAPEEAMGREGR
EEGGREGAREEGQEEAMDALTLATAAQRLGRLCTGCFGAQVKVATWFFPM
VEKALAEEEEEEEEEEQELEQKQEKGDRGRRRRRKLCFDARAFTSLCDGI
AMLGAPGRKGGREGGREGGRKGEKRKGGLIGGKVAAPVDKGAH
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mRNA from alignment at KK037247.1:22821..24103-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7886 ID=rna7886|Name=rna7886|organism=Nannochloropsis gaditana|type=mRNA|length=1283bp|location=Sequence derived from alignment at KK037247.1:22821..24103- (Nannochloropsis gaditana)
GGAGGGAGTTCTGGAGGCCGTATGCGATGCAGTGGCGCAGAGCCTGGCCT
CCTATGCCTTTCCTCCTTCCTCCTCCTTTCTTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCCTTTCTATCTTCTCCCCGAGCGCA
GAGGTCTGTCTCGTCGCTTCATTCCGACAGAGGGGTGTGCCTTTCCTCCT
TCCCTCCCTCCGTCCCTTCCTCACCCTTTTCACCCCTCTCTGTGTCCTCC
CTTTTCCACTTGCGCTAGGACGTCGTTTTCCTGGCTGAGGGATTCGTGAG
CTACCTAAAACAGCCTTCTCTTTCTCCCTCTTCCTCCTCCTCCTCCTCCT
CCTCCTCTCCTCCCTCCTTCATCTCTTTCCCAGCTATTTCCCGCACTACC
TCCTCCCCTTCTCCCTCCATCCCCGCAGCCACCACGTCTCAAGGAAGGAT
TCCTACCTCCTCCCCTCTCCTCCTACCCCCCTCCCTCCTTCGCGCCCACG
GAGTCTTCTCCTCCCTCCTTTCCTCCTCGCGTGCTTCGAGCTGGCAACCC
TCCCACCGCCGCCGCCTCCGTCGGCTTCTCTCCCAAATCAGAAGGGCGGG
AGGGAGGGAAGGAAGGAAGGAGAAGCCACTTCCGCGCTCTCCTACCCTGC
ATCACGCAGTGTTGCGAGCAGGCAGCGTCGGGGAAATTCGAAACGTGATG
CAGGCGCCTGAAGAGGCGATGGGGAGGGAAGGAAGGGAAGAGGGGGGGAG
GGAAGGGGCAAGGGAGGAGGGACAGGAGGAAGCAATGGACGCTTTGACCT
TAGCAACGGCTGCTCAGAGGTACGTGAGGGGAAGGCTGTCGGCGGAGGGG
GTGGCCTAGGAGCGCCCTGTCCTCCCTCCCTCCCTCCCTTACCACTCCCT
GCTTCCGCCCGTCCCCTCTGTCTCCCCTACCTAGACTGGGTCGTTTGTGC
ACGGGGTGTTTTGGCGCCCAAGTTAAGGTGGCGACGTGGTTCTTCCCGAT
GGTGGAGAAGGCGCTAGCCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGC
AGGAGCTGGAGCAGAAGCAGGAGAAAGGGGATAGAGGGAGAAGGAGAAGG
AGGAAATTGTGCTTTGACGCACGAGCTTTTACGTCTCTATGTGACGGGAT
CGCGATGCTAGGTGCTCCAGGTAGGAAGGGGGGAAGGGAGGGGGGGAGGG
AGGGAGGGAGGAAGGGGGAAAAGAGAAAGGGAGGGCTGATCGGAGGCAAG
GTAGCAGCACCCGTTGACAAGGGGGCTCACTAG
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Coding sequence (CDS) from alignment at KK037247.1:22821..24103-

>rna7886 ID=rna7886|Name=rna7886|organism=Nannochloropsis gaditana|type=CDS|length=3096bp|location=Sequence derived from alignment at KK037247.1:22821..24103- (Nannochloropsis gaditana)
ACTGGGTCGTTTGTGCACGGGGTGTTTTGGCGCCCAAGTTAAGGTGGCGA
CGTGGTTCTTCCCGATGGTGGAGAAGGCGCTAGCCGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGCAGGAGCTGGAGCAGAAGCAGGAGAAAGGGGATAG
AGGGAGAAGGAGAAGGAGGAAATTGTGCTTTGACGCACGAGCTTTTACGT
CTCTATGTGACGGGATCGCGATGCTAGGTGCTCCAGGTAGGAAGGGGGGA
AGGGAGGGGGGGAGGGAGGGAGGGAGGAAGGGGGAAAAGAGAAAGGGAGG
GCTGATCGGAGGCAAGGTAGCAGCACCCGTTGACAAGGGGGCTCACTAGG
ACGTCGTTTTCCTGGCTGAGGGATTCGTGAGCTACCTAAAACAGCCTTCT
CTTTCTCCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCTCCTCCCTCCTT
CATCTCTTTCCCAGCTATTTCCCGCACTACCTCCTCCCCTTCTCCCTCCA
TCCCCGCAGCCACCACGTCTCAAGGAAGGATTCCTACCTCCTCCCCTCTC
CTCCTACCCCCCTCCCTCCTTCGCGCCCACGGAGTCTTCTCCTCCCTCCT
TTCCTCCTCGCGTGCTTCGAGCTGGCAACCCTCCCACCGCCGCCGCCTCC
GTCGGCTTCTCTCCCAAATCAGAAGGGCGGGAGGGAGGGAAGGAAGGAAG
GAGAAGCCACTTCCGCGCTCTCCTACCCTGCATCACGCAGTGTTGCGAGC
AGGCAGCGTCGGGGAAATTCGAAACGTGATGCAGGCGCCTGAAGAGGCGA
TGGGGAGGGAAGGAAGGGAAGAGGGGGGGAGGGAAGGGGCAAGGGAGGAG
GGACAGGAGGAAGCAATGGACGCTTTGACCTTAGCAACGGCTGCTCAGAG
ATGCGATGCAGTGGCGCAGAGCCTGGCCTCCTATGCCTTTCCTCCTTCCT
CCTCCTTTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCCTTTCTATCTTCTCCCCGAGCGCAGAGACTGGGTCGTTTGTGCAC
GGGGTGTTTTGGCGCCCAAGTTAAGGTGGCGACGTGGTTCTTCCCGATGG
TGGAGAAGGCGCTAGCCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCAG
GAGCTGGAGCAGAAGCAGGAGAAAGGGGATAGAGGGAGAAGGAGAAGGAG
GAAATTGTGCTTTGACGCACGAGCTTTTACGTCTCTATGTGACGGGATCG
CGATGCTAGGTGCTCCAGGTAGGAAGGGGGGAAGGGAGGGGGGGAGGGAG
GGAGGGAGGAAGGGGGAAAAGAGAAAGGGAGGGCTGATCGGAGGCAAGGT
AGCAGCACCCGTTGACAAGGGGGCTCACTAGGACGTCGTTTTCCTGGCTG
AGGGATTCGTGAGCTACCTAAAACAGCCTTCTCTTTCTCCCTCTTCCTCC
TCCTCCTCCTCCTCCTCCTCTCCTCCCTCCTTCATCTCTTTCCCAGCTAT
TTCCCGCACTACCTCCTCCCCTTCTCCCTCCATCCCCGCAGCCACCACGT
CTCAAGGAAGGATTCCTACCTCCTCCCCTCTCCTCCTACCCCCCTCCCTC
CTTCGCGCCCACGGAGTCTTCTCCTCCCTCCTTTCCTCCTCGCGTGCTTC
GAGCTGGCAACCCTCCCACCGCCGCCGCCTCCGTCGGCTTCTCTCCCAAA
TCAGAAGGGCGGGAGGGAGGGAAGGAAGGAAGGAGAAGCCACTTCCGCGC
TCTCCTACCCTGCATCACGCAGTGTTGCGAGCAGGCAGCGTCGGGGAAAT
TCGAAACGTGATGCAGGCGCCTGAAGAGGCGATGGGGAGGGAAGGAAGGG
AAGAGGGGGGGAGGGAAGGGGCAAGGGAGGAGGGACAGGAGGAAGCAATG
GACGCTTTGACCTTAGCAACGGCTGCTCAGAGATGCGATGCAGTGGCGCA
GAGCCTGGCCTCCTATGCCTTTCCTCCTTCCTCCTCCTTTCTTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCTTTCTATCTTCT
CCCCGAGCGCAGAGACTGGGTCGTTTGTGCACGGGGTGTTTTGGCGCCCA
AGTTAAGGTGGCGACGTGGTTCTTCCCGATGGTGGAGAAGGCGCTAGCCG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGCAGGAGCTGGAGCAGAAGCAG
GAGAAAGGGGATAGAGGGAGAAGGAGAAGGAGGAAATTGTGCTTTGACGC
ACGAGCTTTTACGTCTCTATGTGACGGGATCGCGATGCTAGGTGCTCCAG
GTAGGAAGGGGGGAAGGGAGGGGGGGAGGGAGGGAGGGAGGAAGGGGGAA
AAGAGAAAGGGAGGGCTGATCGGAGGCAAGGTAGCAGCACCCGTTGACAA
GGGGGCTCACTAGGACGTCGTTTTCCTGGCTGAGGGATTCGTGAGCTACC
TAAAACAGCCTTCTCTTTCTCCCTCTTCCTCCTCCTCCTCCTCCTCCTCC
TCTCCTCCCTCCTTCATCTCTTTCCCAGCTATTTCCCGCACTACCTCCTC
CCCTTCTCCCTCCATCCCCGCAGCCACCACGTCTCAAGGAAGGATTCCTA
CCTCCTCCCCTCTCCTCCTACCCCCCTCCCTCCTTCGCGCCCACGGAGTC
TTCTCCTCCCTCCTTTCCTCCTCGCGTGCTTCGAGCTGGCAACCCTCCCA
CCGCCGCCGCCTCCGTCGGCTTCTCTCCCAAATCAGAAGGGCGGGAGGGA
GGGAAGGAAGGAAGGAGAAGCCACTTCCGCGCTCTCCTACCCTGCATCAC
GCAGTGTTGCGAGCAGGCAGCGTCGGGGAAATTCGAAACGTGATGCAGGC
GCCTGAAGAGGCGATGGGGAGGGAAGGAAGGGAAGAGGGGGGGAGGGAAG
GGGCAAGGGAGGAGGGACAGGAGGAAGCAATGGACGCTTTGACCTTAGCA
ACGGCTGCTCAGAGATGCGATGCAGTGGCGCAGAGCCTGGCCTCCTATGC
CTTTCCTCCTTCCTCCTCCTTTCTTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCCTTTCTATCTTCTCCCCGAGCGCAGAG
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Synonyms
Publications