rna7885, rna7885 (mRNA) Nannochloropsis gaditana

Overview
Namerna7885
Unique Namerna7885
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1386
Alignment locationKK037247.1:20752..22080 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100250g1.10531.mrna
Orig protein idgnl|cribi|Naga_100250g1.10531
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:20752..22080 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100250g1gene7638Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22812.1cds7863Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7885rna7885-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7885 ID=rna7885|Name=rna7885|organism=Nannochloropsis gaditana|type=mRNA|length=1386bp
ATGCTGGATACCAAGGAAGCCTGGCAGACGCCCGTGCGGCACTTTTGTGA
ATCTGCCCATGATCATGCCGGTCCAGAAATGTGGAGCGCGTTCTCCTCTT
TGGGTATTACTTTTTTCGCCTGCCTCTGCCTCTTCACCGGGCAACACAGC
AACGTGCTCGTCAAAATGTGCGCAGCCGTGCTTGCGTGGTGCGGCATCGG
CTCGTTTGGCTTCCATTGGACGTTGTCGGAAGCTTGGTCCTTCCTCGATA
CCTTCCCCATGACAATCGCAGCGGTCTTGGGCATGTACCTGTGCTGGGCC
GTTCTCATCGACGAGATATTTTTCTTCCTCTACCGTCCTTTGTCCTTGGT
CCCCAGGGACGGGGAGCCGGCGCCCATGACGCAAGGCTGGGGATGGAAAC
CACCGCCTCCCCCTCTGCTTTTTAAACGAAAATCCCAATGCATGAGCGTC
CTTGCCCTCCTCGCCAGCGGGCTGCTCATCTGGAGCCTGGTTCTGAACGC
TGTCTATGGTAACGTCTTCTACGACACGCTGTTCACCGTCCTCGGGCTCT
TCCTCCTCGCGTCGGCCCTGACCCCTGCGTGCCTTCCACCGGAGGCGACA
GAGGCTGGAAAGTCAGGAGAGCCGGAGGGAGGAAGTATCCATGGTGGTGG
CATTCCTCGCCCGCCGCCCATGCATGGATGGCTGCTAGCCTTGCGCGTGA
AGGAGCGGCATTACATGCCCGTCCTGGGGGGCGAGACGCAGGCGCTTTCC
GTCATCCTCCTCGGCCTCCTCCTCGTCTTGTTCGCCGCCATAATATGGGA
GACGAGTGAACAGCTCTGTCCTCTCCCTCACTGGGGCTGGTTGAGGTATC
TGCGGTTACACGCCCTGTGGCATCTTTCGATAGGCTATGGAGTCTACCTT
CTCCTACAGGCATCAGCGCTTCTCTCCGCCCCAAGTCTCTTTGGGAAGCG
CGCCATGTTCGATAATCGTCATTCGCGCCGTATTTGGATAAACACTTTCT
TCCCCCGCGTCGTCTACCTAAACTGCACCTGTCAGTCAGGGCGTGAGAGT
GGCGGGAGGGAAGGGAAAGGAGACAGGGAGTGGTGGGTGATTTGTGTGGA
ATGTGGGCGGGAGGAGCGTCGGAGGGCGGAAGTGGAATCAGGAGGTTGGG
ATGTGCGTCAGAGGGAAAGCGAGAGGGAAGGAAATGGAGGATTGATTGGA
GGCAGCGAAGGAGGGAGACTAAGAAGCAGAAGCGCGTGCTCTACGGTAGG
GAGCGAAGGGAGTGCAAGCACGTACAGATCATCCTCCGCTTCCTCCTCGC
CCCTTCACCCCTCCTCCACTTCTTTTCCCTGCTCCTTCGCAGTCTCTTCC
TCCTCGTCCTTGGACCGTAATGAGGAAGGACGGTGA
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protein sequence of rna7885

>rna7885-protein ID=rna7885-protein|Name=rna7885|organism=Nannochloropsis gaditana|type=polypeptide|length=188bp
MGGFFSFSLLFSLLLFLFLLLFLLLLLLLLLLLILFLHLLLPTPCSPYRS
ALLGKDSLGALATLSLPPSLTSSLPPSLPPSTRTRWVHLTTSLLPAMHLF
TLWAIVEASIALDLWDGKEGMEEGTEEAARILVEKARTLLPKLVRKAKVR
ARAMGARGQGERRVEGKVGWVRKEVEEGLRRIEEMMAR
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mRNA from alignment at KK037247.1:20752..22080-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7885 ID=rna7885|Name=rna7885|organism=Nannochloropsis gaditana|type=mRNA|length=1329bp|location=Sequence derived from alignment at KK037247.1:20752..22080- (Nannochloropsis gaditana)
CGCGGGCCCAAGAGCTGATGATGAGGGAGAAGAGGGAAGATCCAGTGGTG
CCGAGCCATGTGCATGAGATGGCGAATCTGATATACGCCCTGGGATTGCT
TTTTAAGGGAGGAGGGTGGACAGAGGGGGGGAAGGGAGAAGGAGGAAGTC
GGAGCCGGCAAAGGGAAATTATGTTGGAGGCAGTTTTGGCCTGGGAAACG
GAGATGTCACCCTCATGGGTGGCTTCTTCTCCTTCTCTCTCCTCTTCTCC
CTCCTCCTCTTCCTCTTCCTCCTCCTTTTCCTCCTCCTCCTTCTCCTCCT
CCTCCTTCTCCTCATCCTCTTCCTTCACCTCCTCCTCCCCACCCCCTGCT
CCCCTTATCGATCCGCTTTGTTGGGCAAAGATTCCTTGGGGGCACTCGCC
ACGCTTTCCCTCCCTCCCTCCCTTACGTCCTCCCTCCCTCCCTCCCTCCC
TCCCTCGACTCGCACGCGTTGGGTCCACCTGACCACCTCCCTTCTCCCAG
CCATGCACTTGTTCACCCTGTGGGCGATCGTCGAAGCCAGCATCGCCCTG
GACCTGTGGGACGGTAAAGAGGGGATGGAAGAAGGCACAGAGGAAGCTGC
GCGAATCCTCGTGGAAAAGGCGCGAACCCTGCTGCCAAAACTGGTGAGGA
AAGCTAAGGTGAGGGCCCGGGCGATGGGAGCACGGGGACAAGGGGAGAGG
AGAGTGGAAGGGAAGGTGGGCTGGGTGAGGAAGGAGGTGGAGGAGGGACT
GAGACGCATAGAGGAGATGATGGCGCGCTAGCGGGCCCAGGAGGAAACTT
TGAGGACGGATGGACAGGAAGGGGGGGAGGGAGAGGTGGAGGACAAGAAG
GGAGGAGGCCGGGGAGGAGGAAAGGGAGGAGATTGAGAAGGCATGGGCGA
AGGAGATAATGGTGAAGGCACGACTACGAGACTGAGAAGGATCATGGGAG
GAAGCGGGTCATGGAAGGGAACAAGTAAGGAAAAGGTTAGACGACTGAGT
GGAAGACTGGTGCGACGTGGATATGGGCCAAGAAGAGCTGGTTTGTGTCG
AGGCATACTGTGGCAGGCTGTATATAGGATCGAGTGCGTGTGCAGGGAGG
GTGGAAGAAGGTGCCATGAGTAGTGTTGCAGAGGTGCTTGGGGTAGTGAG
TGGATGTAAATGGAGGGAAGACGGCGATTTGCGAATTTGACAGGATCTCG
TGAGAAGGCCTGCGGGATGGGTGACATGGATGATTAGCTTGGAGTGATCA
CCGCTTGTTTTGGCGCTTCTTTTCGACAAAGGCATTAATCCGACGCAAGA
AAGCAATAACATGACGGCAATACATGTGA
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Coding sequence (CDS) from alignment at KK037247.1:20752..22080-

>rna7885 ID=rna7885|Name=rna7885|organism=Nannochloropsis gaditana|type=CDS|length=567bp|location=Sequence derived from alignment at KK037247.1:20752..22080- (Nannochloropsis gaditana)
ATGGGTGGCTTCTTCTCCTTCTCTCTCCTCTTCTCCCTCCTCCTCTTCCT
CTTCCTCCTCCTTTTCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCA
TCCTCTTCCTTCACCTCCTCCTCCCCACCCCCTGCTCCCCTTATCGATCC
GCTTTGTTGGGCAAAGATTCCTTGGGGGCACTCGCCACGCTTTCCCTCCC
TCCCTCCCTTACGTCCTCCCTCCCTCCCTCCCTCCCTCCCTCGACTCGCA
CGCGTTGGGTCCACCTGACCACCTCCCTTCTCCCAGCCATGCACTTGTTC
ACCCTGTGGGCGATCGTCGAAGCCAGCATCGCCCTGGACCTGTGGGACGG
TAAAGAGGGGATGGAAGAAGGCACAGAGGAAGCTGCGCGAATCCTCGTGG
AAAAGGCGCGAACCCTGCTGCCAAAACTGGTGAGGAAAGCTAAGGTGAGG
GCCCGGGCGATGGGAGCACGGGGACAAGGGGAGAGGAGAGTGGAAGGGAA
GGTGGGCTGGGTGAGGAAGGAGGTGGAGGAGGGACTGAGACGCATAGAGG
AGATGATGGCGCGCTAG
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Synonyms
Publications