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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100295g4.2582.mrna |
| Orig protein id | gnl|cribi|Naga_100295g4.2582 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002474.1 | supercontig | CM002474.1:137473..140031 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7858 ID=rna7858|Name=rna7858|organism=Nannochloropsis gaditana|type=mRNA|length=438bp
ATGACCCCGAGGAAAATGCGTGGCTCGCCTTCGATGACGGAGCTAACCAT
TCAATGCAATATTTATCCTTGGATTTTGCAACACAATTGGTTTGAGTTTA
AGCTCACTGACTGCATTATATTGTTAACTACTCCTATGGATGCTACCAAC
GAAATACTACGCTGTGTTCCCAATCCTGTAAAGGAAAACGTTTACCCAAG
TTCGCAGGAAAATACTTTAATGAATGATGGTCGCTCGTCAAGTGCACCCA
GTCTTGTGGATGTGGCCGTACGCCTACCTCCAGCTTTCACATTTGTCCCG
AACGCTTCCACGGGTGGTGCTCCTGCTTCTGGAGCACGAGTCGTCCGATC
GGCTACCTGGCAAGGCGGGGCACCCGCAGACATTGTGATTGGTGTGAAAA
CTATTCGGAGGCGCACGAGAAGATCTGCTGCAGTTTGA back to topprotein sequence of rna7858 >rna7858-protein ID=rna7858-protein|Name=rna7858|organism=Nannochloropsis gaditana|type=polypeptide|length=346bp
MSSPPPATTAVRALPPRGGRAEGGSNRPGPLGKRPPALPLASPPLLSPAT
SSVPPSSMASSLSCTPSASLPPRRPDVHRSISGYAHVDAGRALRRHLALG
PFTSGLEWTMLAGVATGLLSAACVVAEKHGFFMGFNDFEYTTAGDLNLID
LSIGWNRFSMDVNGMAVVTLRPLSSISRMAYLLGCLTFAGHLLSVCLSAI
LVSFLHQVRSQGRISPLAGAFVHTRLISGCLIFLSLFLAGVSCIEFRYVV
LRDFNAEFRDAPQMEGFRIKPGWAYFLTVTVSALCLLMGGRLGINAGMMD
KVLAHAAAIGTETEDSLRKPKRGQVHHFAGPPARSQRPPRPAFLSV back to topmRNA from alignment at CM002474.1:137473..140031- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna7858 ID=rna7858|Name=rna7858|organism=Nannochloropsis gaditana|type=mRNA|length=2559bp|location=Sequence derived from alignment at CM002474.1:137473..140031- (Nannochloropsis gaditana)
TTCACGAAGCTCTTTTCCACGTTTCGATCCATTCCAGGGCACTTTTATAT
ATCAATCATCTTTCAACATATCAATATTAGGCTAGGAAAGATCAAAGGGG
GTCTGCTTTGGTGGAAGCAGCAGGAGGGCCTTAGCCCGCATCCATCACAC
CTCGCCGTCTCTTAATCAAGCGTTCGGACAAGCACCTGCGAAATGATAGA
CAGCCAAGGCCATCAAGCTTCATCCTTGCACAAAAACCTCAATTTTGAGG
ACTTATCTACGCAAGGAAAAAGCTACGATGAGTGCAAGGATCTGGACCCC
TCGACGCCCCGAACCACCAAGCGTGTGACACTTGTGGAGGAGCCAACACA
CTACGGACCGGCGTACACTTTCTTTCCCACCCCTACCCCGGGTGGACTAG
CCTCATCAACAAATCGTACGGCCTCAAGTCATGCGTTGACTGAGACGCTG
GCCCCACTGTCGGCCACGCATAGAAAGGGCAAGCCCCCCCCCCCCAAGAT
CACGCTCCTCTCCGTTAGCTGGAACCAGAAGCCTGACATTTCAGGGGCCC
CTAGTTCCTTCCCAGCTGCTTCCATGGCAACGTCTCGACAACATCCACAC
CCATTAGTCCAGCCCTCGCCGCGATCGGTCCTAAAGAAGCCGAGCTCCAA
CGTTCCTCTGCGGAGGCCCCTCCCTGTGATCGACGCCTCATTCCTTCCCG
ATCCCCTCTCAGTCGCCAACTCCTCTACGAACCTGCCTCTTTCCCACTCA
AATGCGAACCGGCATATTAAACCTCCACATCTGCACTTTGACGGCAGGAG
TGATCAGAGGGTGCCTCGAGGGGGCGCTGCGGGTGTCGATGGAGGGAGCC
GGACCCTCCCCTCGCCCCGGCCTCGTCCTCCGTCTCTAAATGCCATCTCT
CCCAGGCCCGGCACCTCGTACCTCGCCCCGCTCTATGAAGGGGATGAACG
GCAGGAGGAGAGCGCGGAGGAATCAAGCAGCGACGAGGAGATGCCGGGGG
GGCAGACTAGGAGGCTTGGCTCCTCATCCCCGGTTCCTCTCTCGCCCCCT
CCCCCATCTCCTCCTTGCCGTCGAACCTCCCCCCACCCTCGACCCGTTTA
TCGGTGCAACAGCTTTCCTCAGACCCTTCGGGCTCGGGAAGAAGAGCATC
GCTCGGGCAGTTAAAGGGGGAGAGCGCCATCGAGCTGCAGAGTCTTGAAG
AAGGCTGGACAGAGGAGGAGATCAATAGGGAGGTAGCGTCTCCCCGCCGC
CGCAGCAGCAGCACTGGCATGTCTTCTCCCCCGCCGGCGACGACCGCGGT
TAGGGCCCTCCCTCCCAGAGGGGGCCGGGCGGAGGGGGGGAGCAACCGGC
CAGGCCCCCTTGGAAAGAGACCCCCCGCCCTCCCCCTGGCATCCCCTCCG
CTGCTCTCCCCCGCCACCTCGTCGGTCCCGCCCTCCTCCATGGCATCATC
CCTGTCGTGCACCCCTAGCGCCAGCCTCCCTCCCAGGCGCCCCGATGTCC
ACCGGTCCATTTCCGGATACGCCCACGTGGACGCCGGTCGGGCCCTCCGC
AGGCATCTGGCCCTAGGGCCCTTCACATCCGGGTTGGAATGGACGATGCT
CGCGGGCGTGGCCACTGGGCTGCTGTCCGCAGCCTGCGTCGTGGCGGAAA
AGCACGGCTTTTTCATGGGGTTTAACGACTTCGAGTATACCACCGCCGGG
GACCTCAACCTGATCGACCTCAGCATTGGCTGGAACCGTTTCTCCATGGA
CGTGAACGGGATGGCCGTTGTCACGCTGCGCCCCCTGAGCAGCATCTCGC
GCATGGCCTATCTGCTTGGCTGTCTCACCTTCGCGGGCCACCTCCTCTCT
GTTTGCCTCTCCGCGATCCTAGTCTCCTTCCTCCACCAAGTGCGGAGCCA
AGGCCGCATTTCCCCTCTTGCCGGGGCTTTCGTCCACACGCGGCTCATCT
CGGGCTGCCTTATTTTTCTCAGCCTCTTTCTGGCTGGTGTAAGCTGCATC
GAATTCCGCTATGTAGTTTTGCGGGACTTCAACGCGGAATTTAGGGATGC
GCCGCAAATGGAGGGCTTTCGCATCAAGCCCGGCTGGGCGTACTTCCTGA
CTGTGACGGTCTCAGCGCTCTGCCTGCTCATGGGTGGGCGACTAGGGATC
AACGCGGGCATGATGGACAAGGTGCTCGCTCATGCAGCGGCAATTGGCAC
GGAGACCGAGGACTCTCTGCGGAAACCCAAGCGGGGCCAAGTACATCATT
TTGCGGGTCCGCCCGCCCGATCCCAACGGCCGCCGAGACCAGCTTTCCTA
TCAGTATAGTCTAGATCCAGGAGATGGCACACATCGTGAGCGTTTCTTGT
AGTCTGTCATCTCACGCCAACGCTTTCGCGTGCCTTCGCAAATTTAGAAA
ATGGAAAATTCTAGCATAGCACATGCCAAAAGCAAATCACAACAAAGAAG
TTATGCATCATCGTCAATCGGGGTATCCATTTGACGTTAGCTTTGTGAAA
TTCCTCCACGTATTGTATTCTCACTTTGTCTGCAAAATGGCCTCTAAGAC
AAGCTTGGC back to topCoding sequence (CDS) from alignment at CM002474.1:137473..140031- >rna7858 ID=rna7858|Name=rna7858|organism=Nannochloropsis gaditana|type=CDS|length=1041bp|location=Sequence derived from alignment at CM002474.1:137473..140031- (Nannochloropsis gaditana)
ATGTCTTCTCCCCCGCCGGCGACGACCGCGGTTAGGGCCCTCCCTCCCAG
AGGGGGCCGGGCGGAGGGGGGGAGCAACCGGCCAGGCCCCCTTGGAAAGA
GACCCCCCGCCCTCCCCCTGGCATCCCCTCCGCTGCTCTCCCCCGCCACC
TCGTCGGTCCCGCCCTCCTCCATGGCATCATCCCTGTCGTGCACCCCTAG
CGCCAGCCTCCCTCCCAGGCGCCCCGATGTCCACCGGTCCATTTCCGGAT
ACGCCCACGTGGACGCCGGTCGGGCCCTCCGCAGGCATCTGGCCCTAGGG
CCCTTCACATCCGGGTTGGAATGGACGATGCTCGCGGGCGTGGCCACTGG
GCTGCTGTCCGCAGCCTGCGTCGTGGCGGAAAAGCACGGCTTTTTCATGG
GGTTTAACGACTTCGAGTATACCACCGCCGGGGACCTCAACCTGATCGAC
CTCAGCATTGGCTGGAACCGTTTCTCCATGGACGTGAACGGGATGGCCGT
TGTCACGCTGCGCCCCCTGAGCAGCATCTCGCGCATGGCCTATCTGCTTG
GCTGTCTCACCTTCGCGGGCCACCTCCTCTCTGTTTGCCTCTCCGCGATC
CTAGTCTCCTTCCTCCACCAAGTGCGGAGCCAAGGCCGCATTTCCCCTCT
TGCCGGGGCTTTCGTCCACACGCGGCTCATCTCGGGCTGCCTTATTTTTC
TCAGCCTCTTTCTGGCTGGTGTAAGCTGCATCGAATTCCGCTATGTAGTT
TTGCGGGACTTCAACGCGGAATTTAGGGATGCGCCGCAAATGGAGGGCTT
TCGCATCAAGCCCGGCTGGGCGTACTTCCTGACTGTGACGGTCTCAGCGC
TCTGCCTGCTCATGGGTGGGCGACTAGGGATCAACGCGGGCATGATGGAC
AAGGTGCTCGCTCATGCAGCGGCAATTGGCACGGAGACCGAGGACTCTCT
GCGGAAACCCAAGCGGGGCCAAGTACATCATTTTGCGGGTCCGCCCGCCC
GATCCCAACGGCCGCCGAGACCAGCTTTCCTATCAGTATAG back to top
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