rna7855, rna7855 (mRNA) Nannochloropsis gaditana

Overview
Namerna7855
Unique Namerna7855
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length672
Alignment locationCM002474.1:134382..134974 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100295g7.2577.mrna
Orig protein idgnl|cribi|Naga_100295g7.2577
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:134382..134974 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100295g7gene7608Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22835.1cds7833Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7855rna7855-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7855 ID=rna7855|Name=rna7855|organism=Nannochloropsis gaditana|type=mRNA|length=672bp
AGCGTGACACGGAGGCCTTCACGACAGGGGACGAGGAGGAGGAGGAGAAG
GAGGGAGCATGGGAGGAGGAGGGTGATGAGGGGACTGAGAGTGTAACGGC
CGAGAGGGAGGTGGTTGAGGTGCAGAATGAGGAAGAGGAATGGTGAAGGG
AAGAAGGGGGGATCCAGGTAGTATAGGCGATGCGTGGTATAAGAGGAGAT
CGGGTGTCCTCGAGATGTGCATCAGGATGGACAGGAAGAGAGAGGGAAAA
CAGGGGAGCATGGAGGGAGGTTACGAAGTGGAATTTCGGTGAAGAGGTGG
GAAGAAGGACAGGGGGGCGCAAAAGAGGGGGGAATGGAGCAGGGGGGGGG
AAAGAGCGAGTGCAGCGAGCGACAAATTGTGAAATTTTATCGGCAGAGCT
TGTCTCGGTCGTGAGACGTCTTGGGCGACGCGTCGACAAGGAGAGGAGGG
GTGGCTGGGGTGGCGAAGACATGCGATCAATGGATGCCCCGAGTGATGTG
TGAGGCCACAATGATGCGTGAGCTTGTTTGTATACTTTCTAGCTTTTGTG
TGATGGAGTGTTGAACTGGCATTGAAATCGAGTATTTCATTAATAAGCGA
GAACAGAATGAACGAGTGATCTAATAATAAATAAGCGCCCGGCGAAAGAA
TTGAGACTGTAGCCCACCGACA
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protein sequence of rna7855

>rna7855-protein ID=rna7855-protein|Name=rna7855|organism=Nannochloropsis gaditana|type=polypeptide|length=150bp
MLEPCRLDHLLKGWFCHLLTRSPGAPQALRNPSSPVVESILPRLSTASPH
LLARACTEGQAAWKILGGRKGKALPTLEVHAAGSLCLGASLSSSSLCPST
STASSTDRLNDPALGRDGSPASMGGDGVKNKGTGRYWGSERDSRKTLAPP
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mRNA from alignment at CM002474.1:134382..134974-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7855 ID=rna7855|Name=rna7855|organism=Nannochloropsis gaditana|type=mRNA|length=593bp|location=Sequence derived from alignment at CM002474.1:134382..134974- (Nannochloropsis gaditana)
GATGGCCCTCTGACACGAGCGACCCAAGCTTCTGACCTGACACGAACGTT
GCCTCCATCATGCGATCGACCTCATTGTCCCTAGCTCCCAGACTCATCCA
TTTCCCCTCCCCCCCTCCCTCCCTCCCTCCCTCCAGCAAGCCATGTTGGA
GCCCTGCCGCCTCGACCATCTCCTGAAGGGGTGGTTCTGCCATCTCCTGA
CCCGCAGCCCTGGCGCCCCTCAAGCCCTGCGCAACCCGTCCTCACCTGTC
GTAGAGTCGATCCTCCCGCGCTTAAGCACTGCCTCCCCTCACCTCCTTGC
CCGTGCCTGCACTGAGGGCCAAGCGGCTTGGAAGATCCTCGGGGGCCGGA
AAGGGAAGGCCTTGCCGACTCTGGAGGTGCATGCAGCTGGCAGCCTTTGT
CTTGGGGCCTCGCTTTCCTCCTCCTCGCTCTGCCCCTCCACCTCAACCGC
CTCCTCCACCGACAGATTGAATGACCCCGCACTTGGCCGCGATGGCAGCC
CTGCGAGCATGGGCGGCGATGGGGTGAAGAACAAGGGAACAGGCAGGTAC
TGGGGCTCGGAGAGGGACTCTCGAAAAACGCTCGCGCCCCCTT
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Coding sequence (CDS) from alignment at CM002474.1:134382..134974-

>rna7855 ID=rna7855|Name=rna7855|organism=Nannochloropsis gaditana|type=CDS|length=451bp|location=Sequence derived from alignment at CM002474.1:134382..134974- (Nannochloropsis gaditana)
ATGTTGGAGCCCTGCCGCCTCGACCATCTCCTGAAGGGGTGGTTCTGCCA
TCTCCTGACCCGCAGCCCTGGCGCCCCTCAAGCCCTGCGCAACCCGTCCT
CACCTGTCGTAGAGTCGATCCTCCCGCGCTTAAGCACTGCCTCCCCTCAC
CTCCTTGCCCGTGCCTGCACTGAGGGCCAAGCGGCTTGGAAGATCCTCGG
GGGCCGGAAAGGGAAGGCCTTGCCGACTCTGGAGGTGCATGCAGCTGGCA
GCCTTTGTCTTGGGGCCTCGCTTTCCTCCTCCTCGCTCTGCCCCTCCACC
TCAACCGCCTCCTCCACCGACAGATTGAATGACCCCGCACTTGGCCGCGA
TGGCAGCCCTGCGAGCATGGGCGGCGATGGGGTGAAGAACAAGGGAACAG
GCAGGTACTGGGGCTCGGAGAGGGACTCTCGAAAAACGCTCGCGCCCCCT
T
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Synonyms
Publications