rna7845, rna7845 (mRNA) Nannochloropsis gaditana

Overview
Namerna7845
Unique Namerna7845
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length477
Alignment locationCM002474.1:110779..112895 +

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Properties
Property NameValue
Productleucyl aminopeptidase
Orig transcript idgnl|cribi|Naga_101059g1.227.mrna
Orig protein idgnl|cribi|Naga_101059g1.227
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:110779..112895 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101059g1gene7599Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7845rna7845-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22849.1cds7824Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7845 ID=rna7845|Name=rna7845|organism=Nannochloropsis gaditana|type=mRNA|length=477bp
ATGTTCTGGGTTCCCTTGAAGCGTGGTGCACAATTCAAGGCGAGCGGTTG
CGTCCTCTTTCTGTGTACCATGCTAGCACGCACACTGGCTTCCCCTTCGT
CTATATCTACTTCCTGCCGTCATCAAAGGCAGCTTTACCGGCATGGCATG
CCAACGCGGGCCTTCGTCTCGACCGCTGCGGCATTACTGCACAGTCACGG
TGACAGCGCCCCCAAAAGTGTCACGGATAGACCCGGATATCCCATAAAAT
GGTTAGCCACCAGACAAGGCGGTGCTACCGAGAAGCGCATTTTCGGCCTT
GGACGAGGGGCGGTGAGGATGATGAGCACCCCATGCCTCATGACGTCCAC
GCCCGACAGCAACTTTAAATATCCTCCTGCGGCGGCCTCTGCGATTGAGA
AAACGAACAGCTATCTCGCCAGCTTTGCAGACGGAAACGAGGAAAGCACC
GCGGGGGGGAGTTCGCCAGAGACTTAA
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protein sequence of rna7845

>rna7845-protein ID=rna7845-protein|Name=rna7845|organism=Nannochloropsis gaditana|type=polypeptide|length=227bp
MASDVPVRLRVLIPAVENSVDARAYRNGDIIQARNGKTSEIMTTDAEGRL
VLADALVEADSEDPDLIVDCATLTGAARVAVGTEMSAIWSNKEGLGRRLQ
EISWAINDPCWMMPLYRGYRKHLKSNLADLRNTGSGGSGSITAALYLEEF
LQKRSSPGNSLQKHKATPWIHMDFMGSNNGGRPGRPEGGDAQGMRALFEV
VKEVGEKGGWPKEEGKEEEEGTEGKEE
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mRNA from alignment at CM002474.1:110779..112895+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7845 ID=rna7845|Name=rna7845|organism=Nannochloropsis gaditana|type=mRNA|length=2117bp|location=Sequence derived from alignment at CM002474.1:110779..112895+ (Nannochloropsis gaditana)
ATGGCCTCCGACGTCCCTGTCCGCCTCCGGGTCTTGATCCCAGCGGTCGA GAACAGCGTCGATGCACGCGCCTACCGCAACGGAGACATCATCCAGGtgg gctttccctccttccctccctccttccctccctctttccaatcccccccc ttgccttcGAGTGACTTTTCCCACCAGGCCTCTTTGTTCCTCCCTGATac cctgccccccttctttccctcccttcctcccccccgtcctcccgcaggCT CGGAACGGGAAGACCAGCGAGATCATGACCACGGACGCCGAGGGGCGTCT GGTGCTGGCAGATgccttggtggaggcggacagCGAGGACCCGGATTTGA TTGTTGACTGTGCTACTTTgacaggtgggaagggagggcgggaggagggg gagagggagggggagagggagggcgagagggagagcgagagggagggatg agatgGGATAGGCAAACGTTGGTCATTGACGTGTCCATTGCCTATTCATT CTTTCTTTTCGCGGGTCTTGTCGCTTGGTGCCTTTGTTCACAGCCTGTGC TTTTGGCAttgctctttttcccccctactcctccctcctcgctccctcgc tccctcgctcttctccccgcTGTGTCCAGGGGCGGCCCgcgtggcggtgg ggacCGAGATGTCGGCCATTTGGAGCAAcaaggaggggttggggcGGCGT TTGCAGGTATGCAAGAGATTCGTGGACGCCAGCACACGCCTTCTTACCCT TTGATGaagtggtggcggagggtCTGTGGCCAGGGATTTACGGCTTTTAT CGGCTGGACAGGACCGGGGGTGGGCTGCCCTTTGTCCGCGGCATTCACCC GGGCCTCCTCGGCCTTTCTCTGCCTTGCGATTCTTGCGCGTGCTCCCCCA TGGACGTCGGACTGGCGTAGGGCGTGCTCACGTGAAGctttcgccttctt cctcttctttttttccctcccgcctcctcctaGGAAATTTCCTGGGCGAT CAACGACCCGTGCTGGATGATGCCGCTGTACCGGGGGTAGGGTagggagg ggttgggaaGCGCGAGGCTCCAgtgcggggcaggagggagggacgggagg ggggcttcGAACCAAGaagcggtggtggagggagaaatgagaagcggggg ggaaagggggggggggagaagaagaaagggagggtgctTCCTGCTTCCAA AGCCTCCCTTGGGAGGACATCCCTTGACGAGGCGGCAAGGCCTCTGTCTC TGGCGGAAAAGAGAGCGCCGCTCTCCTTCCGGGCTTCTGTACTCATGAAA GCTACGTCACTCTTTCTCGCTCTCTCTCGTCTCTTGCCCGTTGTTCCCAC CTCTGGCAGCTACCGCAAGCATTTAAAGAGCAATTTGGCCGACCTGCGCA ATACTGGGAGTGGTGGCaggtgcgggaggaaggatgattcacaaggaggg aggaaagaagataaaggaggaggagggagggcgggcgggagaggggagat GAAGTCGAGAAGTAAGGCAGGTGGTTTGATCTTTTTCTGACAAGCGCCTC TTTCTGGCCATCTGTTACAAAACGTTTTACTCTGCTCTTCTCCCGTGCAT CggccctccgctccctctcctctttttaCTACTACAGTGGGAGCATCACT GCAGCGCTCTATTTGGAAGAATTTTTGCAGAAACGATCATCTCCTGGGAA CTCGCTTCAGAAGCACAAGGCCACGCCTTGGATCCACATGGATTTCATGG GTTCCAATAATGGGGGACGCCCAGGTAAgcatggaagggaagcgagccgc cggggggggatgcAAAGGTAGAAGGGCAGAAGGGAATTGAATGTGGATAC GTGACGTGTTGACTTTCGTTCCCACCATTCCCATGAACAGGCCGCCCAGA GGGCGGAGACGCACAAGGAATGCGTGCACTCTTtgaggtggtgaaggaag tgggtgagaaggggggttggccgaaggaggagggcaaggaagaggaggag gggacggaggggaaagaggagtgaGAGAAAACGGTTCGAAGGGGACACGA GTCAGACACGAGGCCGGATAACACACACAAAAGTGAACAAGATAAGGTAT AACAAGAGTGTCACTGG
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Coding sequence (CDS) from alignment at CM002474.1:110779..112895+

>rna7845 ID=rna7845|Name=rna7845|organism=Nannochloropsis gaditana|type=CDS|length=4788bp|location=Sequence derived from alignment at CM002474.1:110779..112895+ (Nannochloropsis gaditana)
ATGGCCTCCGACGTCCCTGTCCGCCTCCGGGTCTTGATCCCAGCGGTCGA
GAACAGCGTCGATGCACGCGCCTACCGCAACGGAGACATCATCCAGgCTC
GGAACGGGAAGACCAGCGAGATCATGACCACGGACGCCGAGGGGCGTCTG
GTGCTGGCAGATgccttggtggaggcggacagCGAGGACCCGGATTTGAT
TGTTGACTGTGCTACTTTgacagGGGCGGCCCgcgtggcggtggggacCG
AGATGTCGGCCATTTGGAGCAAcaaggaggggttggggcGGCGTTTGCAG
GAAATTTCCTGGGCGATCAACGACCCGTGCTGGATGATGCCGCTGTACCG
GGGCTACCGCAAGCATTTAAAGAGCAATTTGGCCGACCTGCGCAATACTG
GGAGTGGTGGCagTGGGAGCATCACTGCAGCGCTCTATTTGGAAGAATTT
TTGCAGAAACGATCATCTCCTGGGAACTCGCTTCAGAAGCACAAGGCCAC
GCCTTGGATCCACATGGATTTCATGGGTTCCAATAATGGGGGACGCCCAG
GCCGCCCAGAGGGCGGAGACGCACAAGGAATGCGTGCACTCTTtgaggtg
gtgaaggaagtgggtgagaaggggggttggccgaaggaggagggcaagga
agaggaggaggggacggaggggaaagaggagtgaATGGCCTCCGACGTCC
CTGTCCGCCTCCGGGTCTTGATCCCAGCGGTCGAGAACAGCGTCGATGCA
CGCGCCTACCGCAACGGAGACATCATCCAGgCTCGGAACGGGAAGACCAG
CGAGATCATGACCACGGACGCCGAGGGGCGTCTGGTGCTGGCAGATgcct
tggtggaggcggacagCGAGGACCCGGATTTGATTGTTGACTGTGCTACT
TTgacagGGGCGGCCCgcgtggcggtggggacCGAGATGTCGGCCATTTG
GAGCAAcaaggaggggttggggcGGCGTTTGCAGGAAATTTCCTGGGCGA
TCAACGACCCGTGCTGGATGATGCCGCTGTACCGGGGCTACCGCAAGCAT
TTAAAGAGCAATTTGGCCGACCTGCGCAATACTGGGAGTGGTGGCagTGG
GAGCATCACTGCAGCGCTCTATTTGGAAGAATTTTTGCAGAAACGATCAT
CTCCTGGGAACTCGCTTCAGAAGCACAAGGCCACGCCTTGGATCCACATG
GATTTCATGGGTTCCAATAATGGGGGACGCCCAGGCCGCCCAGAGGGCGG
AGACGCACAAGGAATGCGTGCACTCTTtgaggtggtgaaggaagtgggtg
agaaggggggttggccgaaggaggagggcaaggaagaggaggaggggacg
gaggggaaagaggagtgaATGGCCTCCGACGTCCCTGTCCGCCTCCGGGT
CTTGATCCCAGCGGTCGAGAACAGCGTCGATGCACGCGCCTACCGCAACG
GAGACATCATCCAGgCTCGGAACGGGAAGACCAGCGAGATCATGACCACG
GACGCCGAGGGGCGTCTGGTGCTGGCAGATgccttggtggaggcggacag
CGAGGACCCGGATTTGATTGTTGACTGTGCTACTTTgacagGGGCGGCCC
gcgtggcggtggggacCGAGATGTCGGCCATTTGGAGCAAcaaggagggg
ttggggcGGCGTTTGCAGGAAATTTCCTGGGCGATCAACGACCCGTGCTG
GATGATGCCGCTGTACCGGGGCTACCGCAAGCATTTAAAGAGCAATTTGG
CCGACCTGCGCAATACTGGGAGTGGTGGCagTGGGAGCATCACTGCAGCG
CTCTATTTGGAAGAATTTTTGCAGAAACGATCATCTCCTGGGAACTCGCT
TCAGAAGCACAAGGCCACGCCTTGGATCCACATGGATTTCATGGGTTCCA
ATAATGGGGGACGCCCAGGCCGCCCAGAGGGCGGAGACGCACAAGGAATG
CGTGCACTCTTtgaggtggtgaaggaagtgggtgagaaggggggttggcc
gaaggaggagggcaaggaagaggaggaggggacggaggggaaagaggagt
gaATGGCCTCCGACGTCCCTGTCCGCCTCCGGGTCTTGATCCCAGCGGTC
GAGAACAGCGTCGATGCACGCGCCTACCGCAACGGAGACATCATCCAGgC
TCGGAACGGGAAGACCAGCGAGATCATGACCACGGACGCCGAGGGGCGTC
TGGTGCTGGCAGATgccttggtggaggcggacagCGAGGACCCGGATTTG
ATTGTTGACTGTGCTACTTTgacagGGGCGGCCCgcgtggcggtggggac
CGAGATGTCGGCCATTTGGAGCAAcaaggaggggttggggcGGCGTTTGC
AGGAAATTTCCTGGGCGATCAACGACCCGTGCTGGATGATGCCGCTGTAC
CGGGGCTACCGCAAGCATTTAAAGAGCAATTTGGCCGACCTGCGCAATAC
TGGGAGTGGTGGCagTGGGAGCATCACTGCAGCGCTCTATTTGGAAGAAT
TTTTGCAGAAACGATCATCTCCTGGGAACTCGCTTCAGAAGCACAAGGCC
ACGCCTTGGATCCACATGGATTTCATGGGTTCCAATAATGGGGGACGCCC
AGGCCGCCCAGAGGGCGGAGACGCACAAGGAATGCGTGCACTCTTtgagg
tggtgaaggaagtgggtgagaaggggggttggccgaaggaggagggcaag
gaagaggaggaggggacggaggggaaagaggagtgaATGGCCTCCGACGT
CCCTGTCCGCCTCCGGGTCTTGATCCCAGCGGTCGAGAACAGCGTCGATG
CACGCGCCTACCGCAACGGAGACATCATCCAGgCTCGGAACGGGAAGACC
AGCGAGATCATGACCACGGACGCCGAGGGGCGTCTGGTGCTGGCAGATgc
cttggtggaggcggacagCGAGGACCCGGATTTGATTGTTGACTGTGCTA
CTTTgacagGGGCGGCCCgcgtggcggtggggacCGAGATGTCGGCCATT
TGGAGCAAcaaggaggggttggggcGGCGTTTGCAGGAAATTTCCTGGGC
GATCAACGACCCGTGCTGGATGATGCCGCTGTACCGGGGCTACCGCAAGC
ATTTAAAGAGCAATTTGGCCGACCTGCGCAATACTGGGAGTGGTGGCagT
GGGAGCATCACTGCAGCGCTCTATTTGGAAGAATTTTTGCAGAAACGATC
ATCTCCTGGGAACTCGCTTCAGAAGCACAAGGCCACGCCTTGGATCCACA
TGGATTTCATGGGTTCCAATAATGGGGGACGCCCAGGCCGCCCAGAGGGC
GGAGACGCACAAGGAATGCGTGCACTCTTtgaggtggtgaaggaagtggg
tgagaaggggggttggccgaaggaggagggcaaggaagaggaggagggga
cggaggggaaagaggagtgaATGGCCTCCGACGTCCCTGTCCGCCTCCGG
GTCTTGATCCCAGCGGTCGAGAACAGCGTCGATGCACGCGCCTACCGCAA
CGGAGACATCATCCAGgCTCGGAACGGGAAGACCAGCGAGATCATGACCA
CGGACGCCGAGGGGCGTCTGGTGCTGGCAGATgccttggtggaggcggac
agCGAGGACCCGGATTTGATTGTTGACTGTGCTACTTTgacagGGGCGGC
CCgcgtggcggtggggacCGAGATGTCGGCCATTTGGAGCAAcaaggagg
ggttggggcGGCGTTTGCAGGAAATTTCCTGGGCGATCAACGACCCGTGC
TGGATGATGCCGCTGTACCGGGGCTACCGCAAGCATTTAAAGAGCAATTT
GGCCGACCTGCGCAATACTGGGAGTGGTGGCagTGGGAGCATCACTGCAG
CGCTCTATTTGGAAGAATTTTTGCAGAAACGATCATCTCCTGGGAACTCG
CTTCAGAAGCACAAGGCCACGCCTTGGATCCACATGGATTTCATGGGTTC
CAATAATGGGGGACGCCCAGGCCGCCCAGAGGGCGGAGACGCACAAGGAA
TGCGTGCACTCTTtgaggtggtgaaggaagtgggtgagaaggggggttgg
ccgaaggaggagggcaaggaagaggaggaggggacggaggggaaagagga
gtgaATGGCCTCCGACGTCCCTGTCCGCCTCCGGGTCTTGATCCCAGCGG
TCGAGAACAGCGTCGATGCACGCGCCTACCGCAACGGAGACATCATCCAG
gCTCGGAACGGGAAGACCAGCGAGATCATGACCACGGACGCCGAGGGGCG
TCTGGTGCTGGCAGATgccttggtggaggcggacagCGAGGACCCGGATT
TGATTGTTGACTGTGCTACTTTgacagGGGCGGCCCgcgtggcggtgggg
acCGAGATGTCGGCCATTTGGAGCAAcaaggaggggttggggcGGCGTTT
GCAGGAAATTTCCTGGGCGATCAACGACCCGTGCTGGATGATGCCGCTGT
ACCGGGGCTACCGCAAGCATTTAAAGAGCAATTTGGCCGACCTGCGCAAT
ACTGGGAGTGGTGGCagTGGGAGCATCACTGCAGCGCTCTATTTGGAAGA
ATTTTTGCAGAAACGATCATCTCCTGGGAACTCGCTTCAGAAGCACAAGG
CCACGCCTTGGATCCACATGGATTTCATGGGTTCCAATAATGGGGGACGC
CCAGGCCGCCCAGAGGGCGGAGACGCACAAGGAATGCGTGCACTCTTtga
ggtggtgaaggaagtgggtgagaaggggggttggccgaaggaggagggca
aggaagaggaggaggggacggaggggaaagaggagtga
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Synonyms
Publications