rna7830, rna7830 (mRNA) Nannochloropsis gaditana

Overview
Namerna7830
Unique Namerna7830
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length791
Alignment locationCM002474.1:67296..68644 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100341g4.8448.mrna
Orig protein idgnl|cribi|Naga_100341g4.8448
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:67296..68644 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100341g4gene7586Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22862.1cds7809Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7830rna7830-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7830 ID=rna7830|Name=rna7830|organism=Nannochloropsis gaditana|type=mRNA|length=791bp
CAAGCGGCCAGGGCGTGAAGGGAGGGAGGAAGTGATGAGCTTGGAGGGTG
GTGGGAAGGTGGGTGGGCAGAGGCCCCATGCCGCGGGGTTTATTATAAAT
AATGCTGCAGAAAGCAGGACCCCGGGAGAGGAGTGTGGAAGATGAAGGCG
GTCGCCAGGGAGGAAACCCGCCGTGGAAAGGCGGAAGGCGTGGGGCCGCG
GGTGGCGAGGATGTTGCGAGGAGGGAGGTTCGGCACCCGTCGCGCCCCCG
GCTGCAAGGGCCTGACAGATGACAAGGGGAGGCGGCTACGAGACGCACGG
GGAGGCGCAGCAGCGGCAGCAGCCACGGCGCTGCTGCTGGTATGCGGACG
GGGGCAGAAGAGGAGGATGAGCGACGGGAGGACGTGGAGGGCCTCGAGGG
GGACAGAGGACCCGGAGATGGGCCGCACCCCTCCCTCTACCACGGGAGGG
AAATGGAAGGAGATCCGCATGGGCCGTCGCCTTAGGTTTTAGGGTTCGTA
GAAAGTGTGTAAGAGGAAAAGACGGGGAAGGCAGGAGGCGGGTAGAGCTG
CGTCTGGAGCCTGTGTGTCGAAGAGAGTACTGGGAGGGAAAGGGAGGAGA
ATAGGGAGGAAGAAAGGAGAAAGGACCGAGAAAGATGGCGGGAATCTCTC
CCGCAGGTCACGGGAGGCAGATATATGGGACTAGAGAAAGTGTCAAAGGT
TTTTACTTTATTATTAATATACAAGTCTTCAAACTCGCGCACGCGTTTTA
CCCACCGAGCAAGCTTCCGCGCTGTTTCATGCACCGCTTCC
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protein sequence of rna7830

>rna7830-protein ID=rna7830-protein|Name=rna7830|organism=Nannochloropsis gaditana|type=polypeptide|length=381bp
MPSSTASQDFSASPTAEEWFASATRVPLVMPGAEKQIINISAHFFARGNP
AATSLSFSSLPSRSPSSPVITFIHGFPTSSHDFASLLPALAPMATLLLWD
MWGYGDSDKEPLGKDQRDDGGGGQNIAREDFSVFSQADLLEALWSHFGIG
ETHIVCHDLGDTVLQELAARGRARQLGSEQGTETKRTVIRDVFMFNGGIF
PRLHRPVLLQNLLLVPALAPFFCRYLMNEWTFNKGICGVFSPAHPPSAVL
LHDMWTGVLRREGYRHYHLLIRYLVERQRHQTRWEEGLDWLVRGGGGKGR
VHFEWGSRDPVSGAHLAVELRRRYQDLGLRLLEGEEEGEREGKGRAMARV
TLREKELGHWPFLEDVPGARGALRAFFQGEG
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mRNA from alignment at CM002474.1:67296..68644-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7830 ID=rna7830|Name=rna7830|organism=Nannochloropsis gaditana|type=mRNA|length=1349bp|location=Sequence derived from alignment at CM002474.1:67296..68644- (Nannochloropsis gaditana)
ATGTGCGTGGACCTTACACTCTTTAAATCACTTCCATTGGCTATCCAGAC
ACAATGCCCTCGTCGACTGCAAGCCAAGACTTTTCGGCCTCACCCACGGC
AGAAGAATGGTTTGCGTCGGCCACCCGGGTGCCCCTCGTCATGCCTGGTG
CTGAGAAGCAGATAATAAACATTTCCGCACATTTTTTCGCGCGTGGGAAT
CCTGCAGCTACGTCCCTCTCTTTCTCTTCACTGCCCTCGCGTTCTCCGTC
CTCTCCTGTCATCACCTTTATCCACGGATTTCCCACTTCCAGTCACGATT
TCGCCTCCCTGCTCCCCGCCTTGGCCCCCATGGCGACCCTACTTTTGTGG
GACATGTGGGGCTACGGTGATTCCGACAAGGAGCCGCTGGGCAAAGACCA
GAGAGATGATGGAGGAGGAGGACAAAACATCGCAAGAGAAGATTTTAGCG
TTTTCAGCCAGGCAGATCTACTTGAGGCACTGTGGAGTCACTTCGGCATC
GGCGAAACGCACATCGTTTGCCACGATCTCGGCGACACTGTATTACAAGA
ACTCGCAGCACGTGGTCGGGCGAGGCAACTGGGGAGCGAGCAAGGGACGG
AGACAAAAAGGACCGTGATACGTGACGTGTTCATGTTCAACGGGGGAATC
TTCCCCCGCCTGCACAGACCCGTGCTCCTTCAAAACCTTCTCCTCGTCCC
GGCCCTCGCGCCTTTTTTTTGCCGGTACTTGATGAACGAGTGGACCTTCA
ACAAAGGTATCTGCGGGGTCTTCTCCCCGGCCCACCCTCCTTCTGCCGTC
CTCCTCCATGACATGTGGACCGGGGTGCTTCGGAGGGAGGGTTATCGGCA
CTACCATTTGCTGATCCGGTACCTGGTGGAGCGACAAAGGCACCAAACGC
GGTGGGAGGAGGGCTTGGACTGGTTGGTGCGGGGCGGAGGTGGCAAGGGC
CGCGTGCATTTTGAGTGGGGAAGTCGAGACCCCGTGTCCGGTGCCCACCT
TGCCGTCGAGTTGCGGCGCCGGTACCAAGACCTGGGGCTAAGGCTGCTGG
AGGGGGAGGAAGAAGGGGAAAGAGAAGGAAAAGGGAGGGCAATGGCGAGG
GTAACATTGCGGGAGAAGGAGTTGGGGCACTGGCCGTTCCTGGAAGACGT
GCCTGGGGCCCGGGGGGCCTTGCGTGCGTTTTTCCAGGGGGAAGGATGAA
AGGGAGAGAGGTGGCGAGGATTATGGATTCGGGTGGCAAAGGAAGCGGTG
CATGAAACAGCGCGGAAGCTTGCTCGGTGGGTAAAACGCGTGCGCGAGTT
TGAAGACTTGTATATTAATAATAAAGTAAAAACCTTTGACACTTTCTCT
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Coding sequence (CDS) from alignment at CM002474.1:67296..68644-

>rna7830 ID=rna7830|Name=rna7830|organism=Nannochloropsis gaditana|type=CDS|length=1146bp|location=Sequence derived from alignment at CM002474.1:67296..68644- (Nannochloropsis gaditana)
ATGCCCTCGTCGACTGCAAGCCAAGACTTTTCGGCCTCACCCACGGCAGA
AGAATGGTTTGCGTCGGCCACCCGGGTGCCCCTCGTCATGCCTGGTGCTG
AGAAGCAGATAATAAACATTTCCGCACATTTTTTCGCGCGTGGGAATCCT
GCAGCTACGTCCCTCTCTTTCTCTTCACTGCCCTCGCGTTCTCCGTCCTC
TCCTGTCATCACCTTTATCCACGGATTTCCCACTTCCAGTCACGATTTCG
CCTCCCTGCTCCCCGCCTTGGCCCCCATGGCGACCCTACTTTTGTGGGAC
ATGTGGGGCTACGGTGATTCCGACAAGGAGCCGCTGGGCAAAGACCAGAG
AGATGATGGAGGAGGAGGACAAAACATCGCAAGAGAAGATTTTAGCGTTT
TCAGCCAGGCAGATCTACTTGAGGCACTGTGGAGTCACTTCGGCATCGGC
GAAACGCACATCGTTTGCCACGATCTCGGCGACACTGTATTACAAGAACT
CGCAGCACGTGGTCGGGCGAGGCAACTGGGGAGCGAGCAAGGGACGGAGA
CAAAAAGGACCGTGATACGTGACGTGTTCATGTTCAACGGGGGAATCTTC
CCCCGCCTGCACAGACCCGTGCTCCTTCAAAACCTTCTCCTCGTCCCGGC
CCTCGCGCCTTTTTTTTGCCGGTACTTGATGAACGAGTGGACCTTCAACA
AAGGTATCTGCGGGGTCTTCTCCCCGGCCCACCCTCCTTCTGCCGTCCTC
CTCCATGACATGTGGACCGGGGTGCTTCGGAGGGAGGGTTATCGGCACTA
CCATTTGCTGATCCGGTACCTGGTGGAGCGACAAAGGCACCAAACGCGGT
GGGAGGAGGGCTTGGACTGGTTGGTGCGGGGCGGAGGTGGCAAGGGCCGC
GTGCATTTTGAGTGGGGAAGTCGAGACCCCGTGTCCGGTGCCCACCTTGC
CGTCGAGTTGCGGCGCCGGTACCAAGACCTGGGGCTAAGGCTGCTGGAGG
GGGAGGAAGAAGGGGAAAGAGAAGGAAAAGGGAGGGCAATGGCGAGGGTA
ACATTGCGGGAGAAGGAGTTGGGGCACTGGCCGTTCCTGGAAGACGTGCC
TGGGGCCCGGGGGGCCTTGCGTGCGTTTTTCCAGGGGGAAGGATGA
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Synonyms
Publications