rna7799, rna7799 (mRNA) Nannochloropsis gaditana

Overview
Namerna7799
Unique Namerna7799
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1215
Alignment locationCM002473.1:419626..420073 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100320g1.4069.mrna
Orig protein idgnl|cribi|Naga_100320g1.4069
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:419626..420073 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100320g1gene7556Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7799rna7799-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22893.1cds7778Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7799 ID=rna7799|Name=rna7799|organism=Nannochloropsis gaditana|type=mRNA|length=1215bp
TTCCTTTCCCCCTCGCATCCTATTGCCCCCTTTCCCGACCTCCTACGCTT
CCTCTCTCCTGCCTTTGCGTCTTCCTCCCCTTGTCTCCACCTGTCCCCCT
CGCCTCTTTGGAGAAGCCCTGCGCACTCCACGCCTCCTCACGTCCCTTCC
CCCTGCCCCTCCCACCCTCCCTCCGCCCTCCCTCCCTCCAGGCCTACTTT
GCCTCGTGCTTGGTAATGCTCATATTTTCCATTCTAAGCGCCATCTCCCC
CAACTTCGCCTTCCTCCTGGTCATGCGCTGCATCGTCGGCTTCGGCATCG
GGGGCTTGGCCGTGCCTTTCGACTTGCTCTGCGAGTCCACGCCCACGGAG
TTCCGAGGCAACATCCTCCTCCTCATGCAGATGTTCTGGGTGCTGGGCTC
CGTCACCGTCGTAGGGATGGCCTGGGGGGTCCTCACTGAGCATGGATGGC
GTTACCTGACGCTCCTGGCCACCCTCCCCCTCCTGATCACATCCTTCGCT
TGCCTCCTGCTGCCCGAGTCCTCCCGCTGGCTCTTGGAGGAGGGCCGCAC
CGAGGACGCGTGGAAAGTCCTGATCAAGGCGGCGCAATGGAACGGGATCA
AAGACCTCCGGTCTCACCTTTTTGATCTCCGGTGGGACCATGCCGCCTCC
CTCGAGGCGGAGGGCGGAAGGGAAGGCGGGAGGGAGGGCGGGAGGGAAGG
CGGGAGGGAGGGCGGGGCAGAGGACGAGGCGGCGCGACAAGTCCAGCCAG
CCTGCCCCTTGCTCGCCCACCACCACCACCGCCTCTCCGTCTCGGAGGGG
GCGCCCACCGAGAAGCCCCCCTCAGCCTTCGCCGCTTTCTTCAAGACCCT
ACCCTTGCTCTTGGTCCCAGGCCTGCGCGCCACCACCCTCTGGCTCTGGC
TGATCTGGTTCTCCTTCGGCCTTGCCTACTACGGGATTATCATCCTCTGC
GCCTCCCTCTTCACCCTGGAGGGGGGGGAGGACGACGCCCTCTTTGACTA
CCCGGCTTTGCTCTACGCGGCGGCCTCAGAGGTGAGGCGAGGGCAGGGTG
GGAGGGAGTGCGGACTGTGCTCCCCGCTAGGAAGACTCGGGGGGGCGAGC
AGGGGAGATAGATCTCCATTGGGGGGGGAAAGGACGGTGACCGCAATGAC
TGGCGCTCTGCGATCCATTGCCCCTCGGCATCGGCTTGTCTTTTGAGAGA
CTTTTTCCACATCTA
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protein sequence of rna7799

>rna7799-protein ID=rna7799-protein|Name=rna7799|organism=Nannochloropsis gaditana|type=polypeptide|length=76bp
MDIESSRSPLRAMNGSSVAPSSSCATTNSSFTASEASRVTQGKELSPHGK
SGVEGSEKLWWNIDEIENIIGLGRFQ
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mRNA from alignment at CM002473.1:419626..420073-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7799 ID=rna7799|Name=rna7799|organism=Nannochloropsis gaditana|type=mRNA|length=448bp|location=Sequence derived from alignment at CM002473.1:419626..420073- (Nannochloropsis gaditana)
ATGGACATAGAGAGCAGCCGGTCCCCCCTACGAGCTATGAACGGAAGCTC
TGTCGCCCCCTCTTCTTCCTGCGCCACCACTAACTCCTCTTTCACCGCGA
GTGAGGCCAGCAGAGTTACCCAAGGGAAGGAGCTGTCCCCGCACGGCAAG
AGCGGGGTCGAGGGGTCGGAAAAGTTATGGTGGAACATCGATGAAATCGA
GGTGCGTGCTTGACCATACCCTGTTCGCCTCCTCCTTTCTGCTCCCTTTC
ACTATGCCTTCTATTTGTCGTCACCTCCACACCATTGCTCCCTTGTCTCC
ACGGAAAGTCTCACTCTCCCCTTGTCTCCTATGACTCCTCTTGTCCCTCC
CGCCCACCCCCGTCAGAACATCATCGGCCTGGGCCGCTTCCAGGTCTTCC
TTCTAATTATCGCTGGCCTCGGTTTCTCCGCCGACTGCATGGAAGTGA
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Coding sequence (CDS) from alignment at CM002473.1:419626..420073-

>rna7799 ID=rna7799|Name=rna7799|organism=Nannochloropsis gaditana|type=CDS|length=693bp|location=Sequence derived from alignment at CM002473.1:419626..420073- (Nannochloropsis gaditana)
TGAAACATCATCGGCCTGGGCCGCTTCCAGATGGACATAGAGAGCAGCCG
GTCCCCCCTACGAGCTATGAACGGAAGCTCTGTCGCCCCCTCTTCTTCCT
GCGCCACCACTAACTCCTCTTTCACCGCGAGTGAGGCCAGCAGAGTTACC
CAAGGGAAGGAGCTGTCCCCGCACGGCAAGAGCGGGGTCGAGGGGTCGGA
AAAGTTATGGTGGAACATCGATGAAATCGAGTGAAACATCATCGGCCTGG
GCCGCTTCCAGATGGACATAGAGAGCAGCCGGTCCCCCCTACGAGCTATG
AACGGAAGCTCTGTCGCCCCCTCTTCTTCCTGCGCCACCACTAACTCCTC
TTTCACCGCGAGTGAGGCCAGCAGAGTTACCCAAGGGAAGGAGCTGTCCC
CGCACGGCAAGAGCGGGGTCGAGGGGTCGGAAAAGTTATGGTGGAACATC
GATGAAATCGAGTGAAACATCATCGGCCTGGGCCGCTTCCAGATGGACAT
AGAGAGCAGCCGGTCCCCCCTACGAGCTATGAACGGAAGCTCTGTCGCCC
CCTCTTCTTCCTGCGCCACCACTAACTCCTCTTTCACCGCGAGTGAGGCC
AGCAGAGTTACCCAAGGGAAGGAGCTGTCCCCGCACGGCAAGAGCGGGGT
CGAGGGGTCGGAAAAGTTATGGTGGAACATCGATGAAATCGAG
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Synonyms
Publications