rna7795, rna7795 (mRNA) Nannochloropsis gaditana

Overview
Namerna7795
Unique Namerna7795
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length786
Alignment locationCM002473.1:404186..405001 -

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Properties
Property NameValue
ProductWW/Rsp5/WWP
Orig transcript idgnl|cribi|Naga_101299g1.10307.mrna
Orig protein idgnl|cribi|Naga_101299g1.10307
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:404186..405001 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101299g1gene7551Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22899.1cds7774Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7795rna7795-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7795 ID=rna7795|Name=rna7795|organism=Nannochloropsis gaditana|type=mRNA|length=786bp
CGCCACTTTGATCCCATGACTTTTGGCAGGCGAGTGTATGTCGTGCTGGT
GAGCACGTACCGGCCCCCCATGGGAGGGATGAAACTTTCTTGCGTGTTTG
GTTTTGTGCCTTTGGCACTTGATAAGTATGTTTGCTGTCTGATGCGCAAC
TGGCTCCGTGGAGGCAATATGTCCATTGGATTGATTGCATGCCTTGGGAA
AATGTTTCCTTAGGGGTCGAATCTCCACTGCAGCACAGTGCACAAAGTGA
GCAATGCACGTGCATGCTGTGGAACGCACAGTTGCGCGCTGTCAGAGCCT
GGACATTCCCACCCCTTCCCGAAGATGGTATACGGCCCCTGTTTGGGAAG
TATTATCCCTCTCATACCATTCAGACATCTGAGACTAAGCGCTCGTACCA
ATCTTTCAATATTTCAGCTCCACATAACTTGATTAAAAGAATGGCTTCTA
GGGCACTGCTAGTTTGTCACTCCTTTTGCCTCCTATGCCCTAGTCTTTCA
TTTCTCTGACCAGTCTCCACATCGTGACACGCGCCACTCCATCTTGGCGT
TCGCAGTCGGTCGCAGCTTTAATCTTATCTTTCCTTGTGGTGATCGATCC
AACATTTGAAAAGTAGTTTTCAAGTCCTCGAAACAATTCAAACATGCGCC
AGCGGTACAATCTGGAGAGCCTCCAGCAATATGCCGCCGCTGCGTTCAAC
ACCGCCACCGAGCTTGTGTATACCTACGTCGGGAGTGACGAGACGAAAAA
TCCCGTGGCGCGGATGACAGCCATGGTATGGGTGGA
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protein sequence of rna7795

>rna7795-protein ID=rna7795-protein|Name=rna7795|organism=Nannochloropsis gaditana|type=polypeptide|length=66bp
MYPRFVTPDGKAVEEEEGEMGDGREEREEEEGEEDKRGEWRTAFSEQGRM
YYWNVRTRVSTYEKPY
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mRNA from alignment at CM002473.1:404186..405001-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7795 ID=rna7795|Name=rna7795|organism=Nannochloropsis gaditana|type=mRNA|length=816bp|location=Sequence derived from alignment at CM002473.1:404186..405001- (Nannochloropsis gaditana)
TCTCCAGATACGTATACCTGCGAGACGAGCATCTCACGGAGGACCACGTC
CTGGAGCTTGCCAGGTGCCTCGCCCCCCCTCTCTCTGCCCTCCCTCCCTC
CCTTGTCCCGGGCCGTCTCCCTCCATCCCTCCGTCCATGCACCCACCACC
ATGCCAGGGTCCACGTCCTCATTCCTCCCTTCCTCCCTCCCTCTTCCCTT
TCTTTCCCTCCTTCTCGTGCTCCCAGGTACGTGCTCCGGGAGTTCGACTC
TCTGAAAACGCTCCCCAAGGAGGCGATCTTCGAATCTCGCTTTAAATGGG
GGCCGCTTCCAGCCTGGGGCCGAGGAAGGGAGGGAGGGAGGGCGGGGCGG
AGGATGTATCCCCGCTTTGTGACACCGGACGGGAAGGCAGTTGAGGAGGA
GGAGGGAGAGATGGGGGACGGTCGGGAGGAGAGGGAGGAGGAGGAAGGGG
AGGAAGACAAGAGGGGGGAGTGGAGGACGGCATTTTCGGAGCAAGGACGG
ATGTACTATTGGAATGTAAGGACGCGGGTGTCTACGTATGAGAAACCCTA
CTAGAGAGAGAGTAATGGTGGGCGTCAACATAGAAGAACGATGTCACCCG
GGCGAGCGCGCATGGCGGCAGAAAGACAGCAAGGGGAAAAAGAAGAAAAA
AGGAGCGAAAGAAGAAAAGACAGGCCCACGCTGAAGATGCATGTGAGGGG
AAGCGTTCGAATAATGGTTTCTTGATCGAAAGATGCCGTACGAAGACGTT
CTCCCTAGACGTGTCACGGAAATGGAATTACACTACACCATTTATTTAAT
CAAGCCGGATCCGTCC
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Coding sequence (CDS) from alignment at CM002473.1:404186..405001-

>rna7795 ID=rna7795|Name=rna7795|organism=Nannochloropsis gaditana|type=CDS|length=201bp|location=Sequence derived from alignment at CM002473.1:404186..405001- (Nannochloropsis gaditana)
ATGTATCCCCGCTTTGTGACACCGGACGGGAAGGCAGTTGAGGAGGAGGA
GGGAGAGATGGGGGACGGTCGGGAGGAGAGGGAGGAGGAGGAAGGGGAGG
AAGACAAGAGGGGGGAGTGGAGGACGGCATTTTCGGAGCAAGGACGGATG
TACTATTGGAATGTAAGGACGCGGGTGTCTACGTATGAGAAACCCTACTA
G
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Synonyms
Publications