rna7794, rna7794 (mRNA) Nannochloropsis gaditana

Overview
Namerna7794
Unique Namerna7794
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length603
Alignment locationCM002473.1:402904..403783 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101299g2.10308.mrna
Orig protein idgnl|cribi|Naga_101299g2.10308
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:402904..403783 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101299g2gene7550Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22900.1cds7773Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7794rna7794-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7794 ID=rna7794|Name=rna7794|organism=Nannochloropsis gaditana|type=mRNA|length=603bp
TCCCTCCCTCCCTCCCTTCCTTCCTTCCTCCCAGATTTACGGTCTTGTCT
GGTTCATCCTCCACCCTTTCTTCTCGATGGAGGGATGGAAGGGTCACTTG
ACCTCGGACCCTTTCCTGTTCTACTTCTTGGTGGTGGGCATGAATGCGCC
CTGGGCCGTGGTGCCGGTGTGCTTGTGGCTGGAGTCGTGGGAGGCGTTGG
TGGGGCGGGAGGGAGGGGGAGCAGGAAGGAGGAGGGGGGCGAAAGAGAAA
TTCGAGACGCTCGCACCGTCGACGCCCGGCTCGGCAAGTGTGGCGGAAGG
GAGGACGAGGAGGAGGAGGGGCGGAGGAAGGGAATAAGGGAGGGAGGAGA
TGGGGAGAAAGGGAGAGCGACGATTGAGGTAACATGTCGCAAAATGTAAG
TTCTCAGTGCATCAAATTATCATCGTGGCCTTTGAGGAGAGGTGTAATAA
AGAAAGAAAGGGGCGGCTGGAACCAAGGAGTCAGTAACGTCTTTTGAAGA
TAACAAAAAAAACATATGGCAATCGCCAAGGCAACAGCAAAGTCGTCGCG
TCAAGAATAGATCGAATCCATGTGCACCCGATATGAAGGATGAATATTTT
TTC
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protein sequence of rna7794

>rna7794-protein ID=rna7794-protein|Name=rna7794|organism=Nannochloropsis gaditana|type=polypeptide|length=106bp
MPWENVSLGVESPLQHSAQSEQCTCMLWNAQLRAVRAWTFPPLPEDGIRP
LFGKYYPSHTIQTSETKRSYQSFNISAPHNLIKRMASRALLVCHSFCLLC
PSLSFL
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mRNA from alignment at CM002473.1:402904..403783-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7794 ID=rna7794|Name=rna7794|organism=Nannochloropsis gaditana|type=mRNA|length=880bp|location=Sequence derived from alignment at CM002473.1:402904..403783- (Nannochloropsis gaditana)
CGCCACTTTGATCCCATGACTTTTGGCAGGCGAGTGTATGTCGTGCTGGT
GAGCACGTACCGGCCCCCCATGGGAGGGATGAAACTTTCTTGCGTGTTTG
GTTTTGTGCCTTTGGCACTTGATAAGTATGTTTGCTGTCTGATGCGCAAC
TGGCTCCGTGGAGGCAATATGTCCATTGGATTGATTGCATGCCTTGGGAA
AATGTTTCCTTAGGGGTCGAATCTCCACTGCAGCACAGTGCACAAAGTGA
GCAATGCACGTGCATGCTGTGGAACGCACAGTTGCGCGCTGTCAGAGCCT
GGACATTCCCACCCCTTCCCGAAGATGGTATACGGCCCCTGTTTGGGAAG
TATTATCCCTCTCATACCATTCAGACATCTGAGACTAAGCGCTCGTACCA
ATCTTTCAATATTTCAGCTCCACATAACTTGATTAAAAGAATGGCTTCTA
GGGCACTGCTAGTTTGTCACTCCTTTTGCCTCCTATGCCCTAGTCTTTCA
TTTCTCTGACCAGTCTCCACATCGTGACACGCGCCACTCCATCTTGGCGT
TCGCAGTCGGTCGCAGCTTTAATCTTATCTTTCCTTGTGGTGATCGATCC
AACATTTGAAAAGTAGTTTTCAAGTCCTCGAAACAATTCAAACATGCGCC
AGCGGTACAATCTGGAGGTAAATGATGTCCTTGTCAACTTATCTGCAAAT
TGTAGCTGATATTCTGGGTAAGCACTCACTTTCACTGCCCCTTTCTTCCC
TCCTGGGATAGAGCCTCCAGCAATATGCCGCCGCTGCGTTCAACACCGCC
ACCGAGCTTGTGTATACCTACGTCGGGAGTGACGAGACGAAAAATCCCGT
GGCGCGGATGACAGCCATGGTATGGGTGGA
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Coding sequence (CDS) from alignment at CM002473.1:402904..403783-

>rna7794 ID=rna7794|Name=rna7794|organism=Nannochloropsis gaditana|type=CDS|length=321bp|location=Sequence derived from alignment at CM002473.1:402904..403783- (Nannochloropsis gaditana)
ATGCCTTGGGAAAATGTTTCCTTAGGGGTCGAATCTCCACTGCAGCACAG
TGCACAAAGTGAGCAATGCACGTGCATGCTGTGGAACGCACAGTTGCGCG
CTGTCAGAGCCTGGACATTCCCACCCCTTCCCGAAGATGGTATACGGCCC
CTGTTTGGGAAGTATTATCCCTCTCATACCATTCAGACATCTGAGACTAA
GCGCTCGTACCAATCTTTCAATATTTCAGCTCCACATAACTTGATTAAAA
GAATGGCTTCTAGGGCACTGCTAGTTTGTCACTCCTTTTGCCTCCTATGC
CCTAGTCTTTCATTTCTCTGA
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Synonyms
Publications