rna7793, rna7793 (mRNA) Nannochloropsis gaditana

Overview
Namerna7793
Unique Namerna7793
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1486
Alignment locationCM002473.1:400811..401413 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100784g1.6247.mrna
Orig protein idgnl|cribi|Naga_100784g1.6247
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:400811..401413 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100784g1gene7549Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22901.1cds7772Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7793rna7793-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7793 ID=rna7793|Name=rna7793|organism=Nannochloropsis gaditana|type=mRNA|length=1486bp
TCCACTTTATTGTCTGTCTCGCTGCCTCTCCTCTGCGTTTCCTCCTTGTT
CAGGGCTCCTGTTCCCTCCTTGTGTCTTTTTCGGTCCTATTCCGCGCAGT
GGCTTCTCCCTTCCCTTGCCTCTCTCTTCTCCTCCACTTTCCCGCCCTCC
TCCCCTCCCTCCCTCGCACCCTGCCTCCTTCCTCGCTATCGGGTGTTTTC
GTCCTCTACCACCAACTTGCCGTCCTCTGTGTGCAGTTTCACTCATGAGC
CTTCCTTGTCACCCCGACCGCCCCTCTTCCTTTCTCTTTCCCCTTCTTTC
CCCCATCGTCCAGGATGACGAGCGGAGGAGGAAAGACGTCCAAACCTTCT
TCGCTTTGAGGGTACGCGATCCTCGCGCAATACTTATCTCCGCCCTCCCT
TCCTCTCTTCCTCTTTCTCTCTTTCCTTTATCTTTCTTATGTGTCTCTCC
TACTTTTCCTGTACCTGCATGTCCTCCTTCCCCCTCTTCCCCTCCTACAA
TAGCACTTTTTTCCCTCTCGTTCAGACCACAATGCTTTAAACCTACCTCC
TACCCTCCCTCCCTCCCTCCCTCCCTCTCTCTCTCCAGGCAGATGCCCTC
GCCTCCCTTCCCGCCTGGGCCGGGCGAGATCGGCCTCCGGTTGATTTGGA
GAAGCTTTGGCCGCATTATCGTGGGATCGTGGCGAAATACCTGCCAGAGA
AATTGGTATGGTAGTTTTTCCCTTTTTTCCTCCCTCTTTCCTCCCCTTCC
TTCCCCCGTCATAACCATGATTCTTGCTGCTAAAGGACCTGAGCTGACGG
AGATGGAAGATCTTCTGCATGTTTTTCCGTGTCACACGTCTTATTTCGTG
TGGAGTGTCAGGGTGATGAGGTCGTGACTTGGAATACATAGCGGGGACGG
ATGTGTTGATGAAAGAAGAAGGAAAAGCGGAGACTAGATGAGGAGAGAAA
GAGATCGCGCGGGCAACTTTTTACGAGAGACAGAGAAGGCGAGGAGTCGA
CAGGGACCAAAAAGGAAGGAGCACCGCGGTGTGGTTTGAAAAAAAAGAAA
ATCGACTTTTAAAAGAATGAAGAGGAGGGGATATTTCAAGGAAGGAGGGC
AAAGGACCTAGATGAACGGAAAATCATGCGATCCACCTCGTTTACAATCA
TACGTCATGCGGTCTGTCTGAATCTGATTGAACCAGAGCTGATTAAGAAG
ATATTGGTGTATTTCTACGGCATGCGACTATAGCGTCAGATGAGAAGTGA
TCTCGCAGAAGAGGCGAGGAATGCAATGTACATAGATTGGATAGCTTAAG
ACTTTAAAGAGGGGTCGCAGATATGGAAGAATGATTGCAGTGTTTCAAAA
AAGGAAACTCTGGCGATATATGTGGAGGGAGAAATTTTCAGAGCAGGGAT
GACGAGGAAGGCCTGTCACTTCTAAGGCAATGTACGCATATTCAAAACCT
TAAACGAATTAATAAATATCTACACCTGAGTTAACG
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protein sequence of rna7793

>rna7793-protein ID=rna7793-protein|Name=rna7793|organism=Nannochloropsis gaditana|type=polypeptide|length=132bp
SLPPSLPSFLPDLRSCLVHPPPFLLDGGMEGSLDLGPFPVLLLGGGHECA
LGRGAGVLVAGVVGGVGGAGGRGSRKEEGGEREIRDARTVDARLGKCGGR
EDEEEEGRRKGIREGGDGEKGRATIEVTCRKM
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mRNA from alignment at CM002473.1:400811..401413-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7793 ID=rna7793|Name=rna7793|organism=Nannochloropsis gaditana|type=mRNA|length=603bp|location=Sequence derived from alignment at CM002473.1:400811..401413- (Nannochloropsis gaditana)
TCCCTCCCTCCCTCCCTTCCTTCCTTCCTCCCAGATTTACGGTCTTGTCT
GGTTCATCCTCCACCCTTTCTTCTCGATGGAGGGATGGAAGGGTCACTTG
ACCTCGGACCCTTTCCTGTTCTACTTCTTGGTGGTGGGCATGAATGCGCC
CTGGGCCGTGGTGCCGGTGTGCTTGTGGCTGGAGTCGTGGGAGGCGTTGG
TGGGGCGGGAGGGAGGGGGAGCAGGAAGGAGGAGGGGGGCGAAAGAGAAA
TTCGAGACGCTCGCACCGTCGACGCCCGGCTCGGCAAGTGTGGCGGAAGG
GAGGACGAGGAGGAGGAGGGGCGGAGGAAGGGAATAAGGGAGGGAGGAGA
TGGGGAGAAAGGGAGAGCGACGATTGAGGTAACATGTCGCAAAATGTAAG
TTCTCAGTGCATCAAATTATCATCGTGGCCTTTGAGGAGAGGTGTAATAA
AGAAAGAAAGGGGCGGCTGGAACCAAGGAGTCAGTAACGTCTTTTGAAGA
TAACAAAAAAAACATATGGCAATCGCCAAGGCAACAGCAAAGTCGTCGCG
TCAAGAATAGATCGAATCCATGTGCACCCGATATGAAGGATGAATATTTT
TTC
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Coding sequence (CDS) from alignment at CM002473.1:400811..401413-

>rna7793 ID=rna7793|Name=rna7793|organism=Nannochloropsis gaditana|type=CDS|length=399bp|location=Sequence derived from alignment at CM002473.1:400811..401413- (Nannochloropsis gaditana)
TCCCTCCCTCCCTCCCTTCCTTCCTTCCTCCCAGATTTACGGTCTTGTCT
GGTTCATCCTCCACCCTTTCTTCTCGATGGAGGGATGGAAGGGTCACTTG
ACCTCGGACCCTTTCCTGTTCTACTTCTTGGTGGTGGGCATGAATGCGCC
CTGGGCCGTGGTGCCGGTGTGCTTGTGGCTGGAGTCGTGGGAGGCGTTGG
TGGGGCGGGAGGGAGGGGGAGCAGGAAGGAGGAGGGGGGCGAAAGAGAAA
TTCGAGACGCTCGCACCGTCGACGCCCGGCTCGGCAAGTGTGGCGGAAGG
GAGGACGAGGAGGAGGAGGGGCGGAGGAAGGGAATAAGGGAGGGAGGAGA
TGGGGAGAAAGGGAGAGCGACGATTGAGGTAACATGTCGCAAAATGTAA
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Synonyms
Publications