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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100764g4.10535.mrna |
| Orig protein id | gnl|cribi|Naga_100764g4.10535 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002473.1 | supercontig | CM002473.1:384443..385580 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7787 ID=rna7787|Name=rna7787|organism=Nannochloropsis gaditana|type=mRNA|length=1681bp
AAGCCCGACACCTGGGCTCTACAACTCGGTATTCGCTCGAATGCAAGGCG
CGTGTTTCCTCTTGACGTTTTCGTGGGCTTTGGTGTCTTTGAATACCATC
GTTGCAAGCATATTTAGACATAGATGCGTTGTGTGCACACGTTATTCTTG
GTAGCAACTGCCCCCGTGGCGAGTGCCATGCATGTCAGATTTTCTCACCA
TTTTTCCCTTTTTGCCCCCTCCCAGGCATGCGCGTCCTACTCACGCTCGC
ATGTTTGGCATCTTGTGCGCTGACCTTCACCGCTGCCCATTCGCCTTACG
ACACAAATGGCAATGACCATGACAACCAGCATCATCAACAACAACCTCCT
CCGCCTGGATACTCCCCGAACGGCATGCCATCCGGGAACAACAACTCCCC
CCCTGGTCCAGGAAACACAAACTACCCGCCCACGCAAGGCAATAACCCCT
ATTCTCCCTTACAAGGGAGTGGGAACTACCCTGGAGCCCAGACCAATGGC
AATTATCCTCCGCAAGCCCCCGGCAGCTACCCTCCCAACCAGGGGGGCAG
CAACTACCCACCCAATCAGGGCGCAGGACCGTACTCTCCCGCGCAACCCA
ACGGCAATTACCCTTCAGGTCAAGGCAATTATCCTCCAGGCCAGGGACAA
GGAAACTATCCTCAAGGCTCGCCCTATGGGAATCAAGGCGGCGGCTCGAC
AGGCACCTATGGACCGGGAGGGATGGGGGGGGGCGGGCAAATGCCTGGCG
GCTACCCGCCAATGCCCAATGGGAACAACAACTACCCACCCAACCAAGCC
TACCCGCCGCAGCGTGCTCCCATGAACAATTACGGCCCCGCCGGGGTTGG
GGGTATGCCGATGCAGGGCATGCAAGGCGGGTCCCCCCCGGGGGGGATGT
TGAAAGGAGGGTCTGCGAGCTACCCTCCTGCACAGGGGGCGGCGATGAAC
GGGAGCCCCGTCGCGAACACCATGCAGAGTAACGATCCGAAGGCCAGCCC
TGTTCCTCCCGCGGACCCGACAAAGAACGGAAATTCAAAAGATGCGGTGC
TGTCGAGCTTAGAGCAGGCGTCCGCTCCCGTCGCATCATCTCCGGCGACT
GTCCCCTCCCGGTCCACAAATTTACGAGGAGGGAATTAGCAAAGCATCCG
ATGCTGTAGCCCTCTGGCATGAGATAGGTAACCCTCGCGGGGCGCGGCTG
TATGGATGCAATGCGCGCGACCCAGGTTGGTTGGATGGGCCATTGATTTG
AGCCAGCATGGGGGCATGGGGTGAAAAGTGAGGCGTTGTTTGATTTTAGG
TGCCCGCGGTGTATAGAGTGTTGATGCCTCACAGGACGTTCTTCAGGATG
AGGATAAAACAAGGTCGTTGTGGGTTTGAGGGTTGGGTTCACAGGTCTGA
ATTATGAACAAAACTATCTACGACTATAGCACATCCGTGTGAGACTGCAT
GTTTTGTTGTTTGGAGTTCACGAGCAAGTCATGATGCCGAACTTCTATCC
CTTATGTGAATCGAAGCTACGAATGGGAGGGAAGGAGGAGCACATAAGGG
AATAGGAAAGAGTGCGTGGGGTCGATGCATTTATTTGTTGAACGCGCGGC
CACCTCAGCACGCAATATTGAAAGAACGACGTAAATTGATTGCAGACTTT
TCGCTTCAGTTGCTTCTTCGAAGCGGTGGCC back to topprotein sequence of rna7787 >rna7787-protein ID=rna7787-protein|Name=rna7787|organism=Nannochloropsis gaditana|type=polypeptide|length=175bp
MPTLTATSTVRWRHATAGTTPPLTRRAPVWQPSRQTGREGGREEGRERER
EGGREGEEGSWGQDGQNHGETESHALNLTKFCEVETARGIFVGRGSNSVA
KEWSTGVGDACQVSSSGPLRPARPCASLYVIAGDTNSRKREEARGSVQVK
NNHQMRFANALTFTHRKRKIRTYVA back to topmRNA from alignment at CM002473.1:384443..385580+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7787 ID=rna7787|Name=rna7787|organism=Nannochloropsis gaditana|type=mRNA|length=1138bp|location=Sequence derived from alignment at CM002473.1:384443..385580+ (Nannochloropsis gaditana)
ATGCCAACCCTGACTGCTACTTCAACTGTCAGGTTGgtcgacccctcctt
ccattaccctttcctttctggCATTCGTTGTCGTGGTTCGCATTCCCACG
TGACGACTTTGCTTCCGGCACTTGCCCCGGAAACTTCTGGTCTCTGACTT
CCCCGTGTGCATgaactccctccctccctccctcactcccttccttcctt
cctccctcactccctccttcagatGGAGACATGCAACAGCTGGGACAACC
CCACCACTGACAAGACGCGCTCCTGTGTGGCAGCCCTCTAGGCAgacagg
cagggagggagggagggaggaaggacgggagagagagagggagggaggga
gggaaggagaggaaggatcTTGGGGGCAGGACGGCCAGAATCATGGGGAA
ACTGGTATGTCGGGGCCTgggagcgagagaggaaaggagcgagaaagagg
aaagcagCGGGCGCATGTGGGGAAAAGCAGAGTCACATGCATTGAATTTA
ACTAAATTTTGCGAGGTTGAAACAGCGAGGGGAATTTTCGTGGGCAGGGG
CTCCAACAGCGTGGCTAAGGAGTGGAGTACGGGGGTAGGAGACGCCTGTC
AGGTATGTATTTGAATTTAAACGCGAAGAAACGGCCAGTAATACTGAGCA
AGTTCCGGTCCGTTGAGACCAGCGAGGCCGTGTGCTTCCCTTTATGTGAT
AGCTGGTGACACAAACAgtagaaaaagggaagaagcacGGGGCAGTGTTC
AAGTAAAAAATAACCACCAAATGCGATTTGCAAATGCTCTCACTTTCACG
CACCGGAAAAGGAAAATAAGGACTTATGGtgttccccccctccccattgt
CCTCGCCATGCACCCCTTTGTTCCCGTATTTCGTTTCCTTTCTTGtatcc
cgctcctccctccctccctccctcccgcgttccctcccttccacccgtcC
TCGCAAGGCCGGTGTCGTGTACAGCTCACATTTGAGAGTTGGTTCAATGT
CTCCGTGCCCAAGGAAACGCTGGCCCTAACTCAAGTCCCGAATTAGTGGC
CTTAACCCCcgccctaaccctaacgaAGATGATTGGATTTCCTTGGAAAA
ACTCGACCCCATGCCGAGTCTTACACACAGTAGCCTGA back to topCoding sequence (CDS) from alignment at CM002473.1:384443..385580+ >rna7787 ID=rna7787|Name=rna7787|organism=Nannochloropsis gaditana|type=CDS|length=2640bp|location=Sequence derived from alignment at CM002473.1:384443..385580+ (Nannochloropsis gaditana)
ATGCCAACCCTGACTGCTACTTCAACTGTCAGatGGAGACATGCAACAGC
TGGGACAACCCCACCACTGACAAGACGCGCTCCTGTGTGGCAGCCCTCTA
GGCAgacaggcagggagggagggagggaggaaggacgggagagagagagg
gagggagggagggaaggagaggaaggatcTTGGGGGCAGGACGGCCAGAA
TCATGGGGAAACTGAGTCACATGCATTGAATTTAACTAAATTTTGCGAGG
TTGAAACAGCGAGGGGAATTTTCGTGGGCAGGGGCTCCAACAGCGTGGCT
AAGGAGTGGAGTACGGGGGTAGGAGACGCCTGTCAGGTATCAAGTTCCGG
TCCGTTGAGACCAGCGAGGCCGTGTGCTTCCCTTTATGTGATAGCTGGTG
ACACAAACAgtagaaaaagggaagaagcacGGGGCAGTGTTCAAGTAAAA
AATAACCACCAAATGCGATTTGCAAATGCTCTCACTTTCACGCACCGGAA
AAGGAAAATAAGGACTTATGTAGCCTGAATGCCAACCCTGACTGCTACTT
CAACTGTCAGatGGAGACATGCAACAGCTGGGACAACCCCACCACTGACA
AGACGCGCTCCTGTGTGGCAGCCCTCTAGGCAgacaggcagggagggagg
gagggaggaaggacgggagagagagagggagggagggagggaaggagagg
aaggatcTTGGGGGCAGGACGGCCAGAATCATGGGGAAACTGAGTCACAT
GCATTGAATTTAACTAAATTTTGCGAGGTTGAAACAGCGAGGGGAATTTT
CGTGGGCAGGGGCTCCAACAGCGTGGCTAAGGAGTGGAGTACGGGGGTAG
GAGACGCCTGTCAGGTATCAAGTTCCGGTCCGTTGAGACCAGCGAGGCCG
TGTGCTTCCCTTTATGTGATAGCTGGTGACACAAACAgtagaaaaaggga
agaagcacGGGGCAGTGTTCAAGTAAAAAATAACCACCAAATGCGATTTG
CAAATGCTCTCACTTTCACGCACCGGAAAAGGAAAATAAGGACTTATGTA
GCCTGAATGCCAACCCTGACTGCTACTTCAACTGTCAGatGGAGACATGC
AACAGCTGGGACAACCCCACCACTGACAAGACGCGCTCCTGTGTGGCAGC
CCTCTAGGCAgacaggcagggagggagggagggaggaaggacgggagaga
gagagggagggagggagggaaggagaggaaggatcTTGGGGGCAGGACGG
CCAGAATCATGGGGAAACTGAGTCACATGCATTGAATTTAACTAAATTTT
GCGAGGTTGAAACAGCGAGGGGAATTTTCGTGGGCAGGGGCTCCAACAGC
GTGGCTAAGGAGTGGAGTACGGGGGTAGGAGACGCCTGTCAGGTATCAAG
TTCCGGTCCGTTGAGACCAGCGAGGCCGTGTGCTTCCCTTTATGTGATAG
CTGGTGACACAAACAgtagaaaaagggaagaagcacGGGGCAGTGTTCAA
GTAAAAAATAACCACCAAATGCGATTTGCAAATGCTCTCACTTTCACGCA
CCGGAAAAGGAAAATAAGGACTTATGTAGCCTGAATGCCAACCCTGACTG
CTACTTCAACTGTCAGatGGAGACATGCAACAGCTGGGACAACCCCACCA
CTGACAAGACGCGCTCCTGTGTGGCAGCCCTCTAGGCAgacaggcaggga
gggagggagggaggaaggacgggagagagagagggagggagggagggaag
gagaggaaggatcTTGGGGGCAGGACGGCCAGAATCATGGGGAAACTGAG
TCACATGCATTGAATTTAACTAAATTTTGCGAGGTTGAAACAGCGAGGGG
AATTTTCGTGGGCAGGGGCTCCAACAGCGTGGCTAAGGAGTGGAGTACGG
GGGTAGGAGACGCCTGTCAGGTATCAAGTTCCGGTCCGTTGAGACCAGCG
AGGCCGTGTGCTTCCCTTTATGTGATAGCTGGTGACACAAACAgtagaaa
aagggaagaagcacGGGGCAGTGTTCAAGTAAAAAATAACCACCAAATGC
GATTTGCAAATGCTCTCACTTTCACGCACCGGAAAAGGAAAATAAGGACT
TATGTAGCCTGAATGCCAACCCTGACTGCTACTTCAACTGTCAGatGGAG
ACATGCAACAGCTGGGACAACCCCACCACTGACAAGACGCGCTCCTGTGT
GGCAGCCCTCTAGGCAgacaggcagggagggagggagggaggaaggacgg
gagagagagagggagggagggagggaaggagaggaaggatcTTGGGGGCA
GGACGGCCAGAATCATGGGGAAACTGAGTCACATGCATTGAATTTAACTA
AATTTTGCGAGGTTGAAACAGCGAGGGGAATTTTCGTGGGCAGGGGCTCC
AACAGCGTGGCTAAGGAGTGGAGTACGGGGGTAGGAGACGCCTGTCAGGT
ATCAAGTTCCGGTCCGTTGAGACCAGCGAGGCCGTGTGCTTCCCTTTATG
TGATAGCTGGTGACACAAACAgtagaaaaagggaagaagcacGGGGCAGT
GTTCAAGTAAAAAATAACCACCAAATGCGATTTGCAAATGCTCTCACTTT
CACGCACCGGAAAAGGAAAATAAGGACTTATGTAGCCTGA back to top
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