rna7771, rna7771 (mRNA) Nannochloropsis gaditana

Overview
Namerna7771
Unique Namerna7771
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1513
Alignment locationCM002473.1:337889..338590 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101809g1.5209.mrna
Orig protein idgnl|cribi|Naga_101809g1.5209
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:337889..338590 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101809g1gene7527Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7771rna7771-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22923.1cds7750Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7771 ID=rna7771|Name=rna7771|organism=Nannochloropsis gaditana|type=mRNA|length=1513bp
ATGTTGGGTAAGTAGGCATGGAACTTTGGAAACCCCAATCCCTTCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTACCTACCTACCTACCTC
CTTCCCTCCTTCCCTCATCGGCCCAACCTCCTCTCCCGCCGTTAGGTCTC
ACTCCCGCCTCCTCACCTAACCTGCCCCACCCCCCTCCCTCCCTCCCTCC
CTCCCTCCGTCCGTCCAGAGCGGTGGCTGTCTATCCCAAGACCAACCGCG
TGCTTGCCTTTGAGGGCAACCTCCTGCACGGGGTGATGCCGGGACGGAGG
GAAGGAGGGAGGGAGGGAGGGAGGGAGGGCGGGAGGCGGGTCACCTTCAT
GGTGGGTTTCTGGGAGAGGGAGGGAGGGGAGGAGGGGGGGAGGGGGAGGG
AGGGGAAGATGGGGGGGAGGGGGAGAGAGGAATTGGACCGATGCAGCCCG
TACCTTCCGTCTCGGAGGGGGTGACGTGGCCGGGAATGCTCGTTTCTTGC
CGCGGAGGGAGGGAGGGAGGGAGGGACGGAGGGAAGGAGGGAGTGTCGGT
TCCTTATTGCGAGGGGAGGGAGGGACGGAGGGACGGAGGGAGGGAGGGAG
GGACGGAGGGAGTGCTGGTCCTGCCCACAGGGGCCTGGGTGAGGGTTGGG
GGTGAAAATGGCGCGAAGCCGGAGCCGGAGGGGAAGAGGGAGGGAGCAGG
AGGCGAAGGAGGGGAAGAGGGAGGGAAGGAGGAAGGGGGGGAGGGAGGGA
AGGAGGGCATGCTCCTGCCTCCGAAATTCACCCACCGGTTCCTGTTGCGG
GAGCCGGGAGAGATCGAGGAGGAGATGCTGTATCTCTGTCTGGCGGCGGA
GGGTACGTGAGGGGGAGGGAAGGGTATAGGAAGAGAGATGAGGGGAGGGA
AGGGTTAAGGTGGGGGGGGAAGAGGGGATGGAGGAGAAGACAAGAGGGGA
AGGATTCGTGCGGTTCGATGTTAAGAGGGATGGAAGGGAAGGGAGGAGGA
GGTGGAGGAAAAGGGGGAGGAGGGATGAGTAGGAGGTGATTCGGAGCAGG
AGGAGGGGGAGGAGGAGGGGAGGAGGAGCAGGAGGTGAAGGAGGAGGCAG
GAAGGGGCGGAAGGGGGAAAGACGGAAAGTATGTTTCAGAGGGGAGATAC
AGGAGCAAGAAGATGCGAGGACCTGGATGAAGAAGGAGAAACAATAGACA
GAGGAATAATAAAATCTTTTCAAGCCAAGATAGTAAATTGTCATGTAGCT
AATGACTAGAAATGCTTAGGGTGAGGAGATGGACGGAGGTATGTAAAATG
AAGAGGAGCTGAGATATTCCATTGTCATGAAGCTCATAAGTAGAAATGCC
TTGATTGAAAAGGGAAAAATAACAAAAGGAGATTTTGTGAAAATTATCGT
AAGGAGATTTTGTGAAAATTATCATAAATGAGATAATTTGAATTCCCGGA
CATTTTTGTGGATGTCTCTGTGTCGGTGTCATTGCAAAGAAAATGGAGTT
GACTGCCCGAACT
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protein sequence of rna7771

>rna7771-protein ID=rna7771-protein|Name=rna7771|organism=Nannochloropsis gaditana|type=polypeptide|length=68bp
MRKAPRRKSGLIDFYTRGQTPYPSHPTSTSSAWPKASLPSRIGFPPSPPP
PPPPLTCLRGTWKASPWV
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mRNA from alignment at CM002473.1:337889..338590-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7771 ID=rna7771|Name=rna7771|organism=Nannochloropsis gaditana|type=mRNA|length=702bp|location=Sequence derived from alignment at CM002473.1:337889..338590- (Nannochloropsis gaditana)
TTGCTCTTTATTTCACCTTTTTTGCAACAATATCCTGTCTCTCATCTTTT
ACGACTCTATGCTCCTTCCCTCACTTGGTTTTCCGCCGCCTACACTTTCT
CTTCCCGATCTGCTTCTCCCTACCACCTTCCCTTCCTCCCTCCCTCCCTC
CCTTCCTCCCTTTCTCCCTCCGCGGGCGCCGAACAAATAACAGAAAGCAT
ACAACCACCACATCCGCTTCTGTCGTTCAACCTGATGGCGGGCGGGGTTT
TGCAATTGCTGTTTGTCCACGAAGGCTTAGGTAGCGATGAGGAAGGCGCC
TCGGAGGAAGAGCGGGCTGATCGACTTTTATACGCGTGGCCAGGTTTGTT
TGGAGGAAGTGCTGTCAAAGAGGAGAGGAGGATGGATGTGGAACGTGTAC
CTTAGATTCTCAGATTCTCCCACATCGGCATTGAAGTCGACGGGCTCCTT
CCTCCCTTACTCGTTTTCCAACCTCCCGTCACTCGCCGCTTTTCCATTCC
TCATCTCAATCCTCCCACAGACTCCCTACCCCTCTCATCCCACCTCCACC
TCCTCCGCGTGGCCGAAAGCCTCCTTGCCTTCACGCATCGGTTTTCCTCC
TTCTCCTCCTCCTCCTCCTCCTCCGTTGACGTGCCTGAGGGGGACGTGGA
AAGCGTCGCCTTGGGTGTGAGTAGTAGGAAAGGAAAGCCAACATGGAGGG
AG
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Coding sequence (CDS) from alignment at CM002473.1:337889..338590-

>rna7771 ID=rna7771|Name=rna7771|organism=Nannochloropsis gaditana|type=CDS|length=414bp|location=Sequence derived from alignment at CM002473.1:337889..338590- (Nannochloropsis gaditana)
ACTCCCTACCCCTCTCATCCCACCTCCACCTCCTCCGCGTGGCCGAAAGC
CTCCTTGCCTTCACGCATCGGTTTTCCTCCTTCTCCTCCTCCTCCTCCTC
CTCCGTTGACGTGCCTGAGGGGGACGTGGAAAGCGTCGCCTTGGGTGTGA
ATGAGGAAGGCGCCTCGGAGGAAGAGCGGGCTGATCGACTTTTATACGCG
TGGCCAGACTCCCTACCCCTCTCATCCCACCTCCACCTCCTCCGCGTGGC
CGAAAGCCTCCTTGCCTTCACGCATCGGTTTTCCTCCTTCTCCTCCTCCT
CCTCCTCCTCCGTTGACGTGCCTGAGGGGGACGTGGAAAGCGTCGCCTTG
GGTGTGAATGAGGAAGGCGCCTCGGAGGAAGAGCGGGCTGATCGACTTTT
ATACGCGTGGCCAG
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Synonyms
Publications