rna7761, rna7761 (mRNA) Nannochloropsis gaditana

Overview
Namerna7761
Unique Namerna7761
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length213
Alignment locationCM002473.1:292519..292875 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100763g1.7663.mrna
Orig protein idgnl|cribi|Naga_100763g1.7663
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:292519..292875 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100763g1gene7515Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22936.1cds7740Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7761rna7761-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7761 ID=rna7761|Name=rna7761|organism=Nannochloropsis gaditana|type=mRNA|length=213bp
ATGATCCCTTCTCCGCCCGAAATAAAGGGAAAGAAATACAAAGTCCGTCC
TGTCACCGCAGACATCGCGGGGAAAACCTGCATCCTTGTCTACACATGGT
CTTTGCCTTCAGCCCCCTTGAATATCCGAGCACTTTCCACAAGCGTTGTC
CATGCGCGTGGCATGCCTACGTCCTCACTCAACTCCCTCTCCACCCCGTC
GACGTTTTATTGA
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protein sequence of rna7761

>rna7761-protein ID=rna7761-protein|Name=rna7761|organism=Nannochloropsis gaditana|type=polypeptide|length=118bp
MTVKVGPYYEVFWGIEAEDEQGARATWRGASDAMTYVQADGRWGGERRVA
GSLHPLLLTSCVPVFRPAVLLPLRGWHQGRWTGDRRVADVKRETSPFKDL
PGPGPGRSGAGGRAGGRS
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mRNA from alignment at CM002473.1:292519..292875-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7761 ID=rna7761|Name=rna7761|organism=Nannochloropsis gaditana|type=mRNA|length=357bp|location=Sequence derived from alignment at CM002473.1:292519..292875- (Nannochloropsis gaditana)
ATGACCGTTAAAGTAGGACCGTATTATGAGGTGTTTTGGGGAATCGAGGC
GGAGGATGAGCAGGGAGCACGAGCGACTTGGCGAGGCGCCTCTGACGCCA
TGACTTATGTACAGGCTGACGGCAGGTGGGGAGGGGAGAGGAGGGTGGCA
GGTAGCCTCCATCCTCTCCTTTTAACCTCCTGCGTCCCCGTTTTCCGTCC
TGCCGTCCTACTGCCTCTTCGTGGCTGGCACCAAGGACGATGGACAGGGG
ATCGGAGAGTGGCTGACGTCAAGAGGGAGACCTCTCCTTTCAAGGACCTT
CCTGGCCCGGGCCCCGGGAGGTCGGGGGCGGGGGGCAGGGCGGGAGGGCG
ATCTTGA
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Coding sequence (CDS) from alignment at CM002473.1:292519..292875-

>rna7761 ID=rna7761|Name=rna7761|organism=Nannochloropsis gaditana|type=CDS|length=357bp|location=Sequence derived from alignment at CM002473.1:292519..292875- (Nannochloropsis gaditana)
ATGACCGTTAAAGTAGGACCGTATTATGAGGTGTTTTGGGGAATCGAGGC
GGAGGATGAGCAGGGAGCACGAGCGACTTGGCGAGGCGCCTCTGACGCCA
TGACTTATGTACAGGCTGACGGCAGGTGGGGAGGGGAGAGGAGGGTGGCA
GGTAGCCTCCATCCTCTCCTTTTAACCTCCTGCGTCCCCGTTTTCCGTCC
TGCCGTCCTACTGCCTCTTCGTGGCTGGCACCAAGGACGATGGACAGGGG
ATCGGAGAGTGGCTGACGTCAAGAGGGAGACCTCTCCTTTCAAGGACCTT
CCTGGCCCGGGCCCCGGGAGGTCGGGGGCGGGGGGCAGGGCGGGAGGGCG
ATCTTGA
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Synonyms
Publications