rna7760, rna7760 (mRNA) Nannochloropsis gaditana

Overview
Namerna7760
Unique Namerna7760
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1512
Alignment locationCM002473.1:291912..292124 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100763g2.7660.mrna
Orig protein idgnl|cribi|Naga_100763g2.7660
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:291912..292124 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100763g2gene7514Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22933.1cds7739Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7760rna7760-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7760 ID=rna7760|Name=rna7760|organism=Nannochloropsis gaditana|type=mRNA|length=1512bp
ATGACAAATAAGGGGTCGTCGCCCAACTCCTTCTTTCCCGCTGGCCGCCT
TCCCCTTCCTTCCGTCCTTGTGTTTGTTCTATTCCTTCTCTCCAGTCTCT
TTTCTGTACAAGACGTACGAGCCACTCCCAGCAACAAGGTGAAATTTGTG
TCCCTCCTGGCAAATGACGCAGTTTTGGACAGGTACGCAGCCGCTGTGGC
GGCAACTGAGCCCCTGCGCGAGGACCGAGACAGAGCGTTGAGAGACAACA
TAAACCCCCTCCACCTTTGGTGGGTGAAAACCACGAAAAAGAACGTTCTA
GAAGCCCACAAGTCCGGTCCGCGGGCAGAGGCCATCCGACGTGCCTGCAC
CTACCACGTCACCCAGTCCTCCAGGATCATCAAGAGCCTGGGGCTGAGCG
TCGCCGACTTCAATCTCATCACCAGAAGGCTGGCACACGATGCCGTGTTG
AGGAAAAAGGCGTCTAGGAGGCCCAAGAAATGGAGTGGCGAGGGCGAGGA
GGAAAAAAGTCGAATGGCCCGCCGGAGAAGGTGGTGGGGGGGGAGGGGAC
GGCAGGGAGGGGAGGAGGAAGGGGAGGAGGAGCAGGAGCTGCCGGTGCCG
ACCAACGTGCTCCCGCATCGCTTGGCCCTCTTCGCCAAAAGCCTGCGGGA
AATCGAGGCGCTCCGAGCCGAGCAAAACCATTTGCTCAAGCAGGAGTTCC
ACGTCGACGCCCTCCCTCCCGGAGCCACCGACCCTTCGCTTTTTCCCATC
CTCAACACTAAAGTGCAGCATCTCTGCCTGCGTTTCCCCGTGCAAGCGGA
AGAAATTGCCCAGAAAAATGGGTTTGAGACGGCGGAATTCAATTCCCTCT
TGTTGAAGACCGAAAAGAACCCTTTCTTTCGATGGCGCCGTCAAGCTTGT
TGGGGGCAGGGAGGATGCAGTATAGGGCCAGCGCGGAAAGGAATTGCAAC
GACGGGAGAGAGAGAATGCTTGTCCTTGTTCTTTCTCATCAAAGGCGAGG
CTGGAACTAGGAGGAACGGGAACTTATGTATGCTTTATCACTTACCAGCA
ATTGAGTGCTTGTCATCACCAACACTCAGAAAGAACAGCGCAACGGAGTA
CACAAAGAAATCGGCCATGCTCGGAGTACCATCCTCCATTGCCGGCATGG
CTAAGGGCGTCGCTGTCAACGGCAAGCGCGGAGTCAGTGCTATCAAACCG
ACGCTTCAGACCTCCTCCCCCTCCCTAGTTCAGCGCCAGCACCGGCGCAT
AAGACCTCTATGGCAGCATCAACTACGTCAGCTTGCTACAGAGACGACAC
ATGCGACGCCTGTCCCGCCTCCACCACCCTCACACCGCAATCGTGTGTAC
CCAGCCGTGCTGCTGGTCACGTTTGCGGCCGTGGTATATGTTATCATGAC
GCCGGACGATGAAGATATTGACAGCAAGATCTTGCAAGCCGTCCAAGCGC
GTCTGCCCGCTGAGGTTCCCCCGGAGGAGCTTTCGACAGCGGAGACATCC
AAAGAGCGGTAG
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protein sequence of rna7760

>rna7760-protein ID=rna7760-protein|Name=rna7760|organism=Nannochloropsis gaditana|type=polypeptide|length=70bp
MIPSPPEIKGKKYKVRPVTADIAGKTCILVYTWSLPSAPLNIRALSTSVV
HARGMPTSSLNSLSTPSTFY
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mRNA from alignment at CM002473.1:291912..292124-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7760 ID=rna7760|Name=rna7760|organism=Nannochloropsis gaditana|type=mRNA|length=213bp|location=Sequence derived from alignment at CM002473.1:291912..292124- (Nannochloropsis gaditana)
ATGATCCCTTCTCCGCCCGAAATAAAGGGAAAGAAATACAAAGTCCGTCC
TGTCACCGCAGACATCGCGGGGAAAACCTGCATCCTTGTCTACACATGGT
CTTTGCCTTCAGCCCCCTTGAATATCCGAGCACTTTCCACAAGCGTTGTC
CATGCGCGTGGCATGCCTACGTCCTCACTCAACTCCCTCTCCACCCCGTC
GACGTTTTATTGA
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Coding sequence (CDS) from alignment at CM002473.1:291912..292124-

>rna7760 ID=rna7760|Name=rna7760|organism=Nannochloropsis gaditana|type=CDS|length=213bp|location=Sequence derived from alignment at CM002473.1:291912..292124- (Nannochloropsis gaditana)
ATGATCCCTTCTCCGCCCGAAATAAAGGGAAAGAAATACAAAGTCCGTCC
TGTCACCGCAGACATCGCGGGGAAAACCTGCATCCTTGTCTACACATGGT
CTTTGCCTTCAGCCCCCTTGAATATCCGAGCACTTTCCACAAGCGTTGTC
CATGCGCGTGGCATGCCTACGTCCTCACTCAACTCCCTCTCCACCCCGTC
GACGTTTTATTGA
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Synonyms
Publications