rna7758, rna7758 (mRNA) Nannochloropsis gaditana

Overview
Namerna7758
Unique Namerna7758
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1279
Alignment locationCM002473.1:287178..287924 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100763g5.7662.mrna
Orig protein idgnl|cribi|Naga_100763g5.7662
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:287178..287924 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100763g5gene7512Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22935.1cds7737Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7758rna7758-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7758 ID=rna7758|Name=rna7758|organism=Nannochloropsis gaditana|type=mRNA|length=1279bp
ATCGATCGGCTCGGACTTGCTGGGGGCTACTGTCCTGGCCACACACCTGT
ACCCAACCTGCTCGATATAAAACGTAATAACAGCACAATCCCACCAGGAC
CAAAACTTCCCACGAATAGCTGGTGAGAATTTTAACATGGAACACTCATT
AAGCACAAGAACACATCCCATTTGACCCGTTTTTGCCTTTTTGCACTCGG
TTACCTCGCATAGCTCAAGCCTTTACCTCCCCACCTACGGGACTCGCCGA
GGCAACTAGACAGCACCGCTTACAAGTTTAGGCACATACTTTCTCAAAGG
ACGGTCAATGACCCGACTTCATGACACCGGCTTGTGCAGTGTCTTGTCGT
TTCTAGAGGTGCACGCGAGTGAGACCCTTTCCGCCGGTCCCCAGTCAAGG
AAAGCTTTCAAGCTAGGAAGTCAATGTTATTCCCTAGGCTCCACCGGTCT
CCTTTGGCTTATTTTTCCACGCTCCAAATTACATACCCACAGGCGTAGTG
CGTCTTACATGTGAAAATTGGTGCCTTGACTGTGAAAATTATTCTTTTCC
TTGCTTGTTGGGTTTTAAACATGTCCTCAGCCCACGTTCACACGCGCTTG
GTTTCCCCTGGCTCCCTTTCCTCCCGCCACCCTCCTCTCCTTAGTTCCTT
CCCACCCGCGCATGTCCGGCGGGCGAGGGGAAAAGAGCCGGTGGACGGAG
ATACACATCGTCCTCTTGTCCTTTGTCATCACCTTCTGCGGCCGTCTCTA
CCGCCGGTGGTCCGCCAGCTTGCACACATTCTCCCTCGTCGCCTCGATTC
GCCGCCGCTTGTTTGGGTCGACTCCTGCCTCCGCCTCCTCCTCCTGCCCC
TGCTCCTCCGCCGGTCGTCCACCAGACCCTTTTATAAGGCCACGCCCATC
CGTGCACAGGCACACGGGCGAGACGAAGCGCCGCTCTTGCAGGGACGAGG
CCGCGAGGTCGTCGAGTATGCCCGCGTTACCCCACCTTCCCTCCATCGAG
GTGCTGAGCCAGCGCGTCGTCCGGGTCCTGGGTCTGAATCCTGGCGCCCA
CACCCTCCAAGGCACCAATACCTACATCGTGGGCACGGGCCCTGCCCGGC
TCCTGATCGACACGGGGGAGGGGCGGGCGGGCTACCTGCCCCTCCTCCAA
CGCGCCTTGCACGAAGCTGGGGCGGAGAGCCTCCAAGCCGTGCTCCTCAC
GCACCACCACTACGACCACGTGGGGGGGTTACCTGACGTCCGGGCCGCCT
TCCCTCCCTCCCTCCCTCCCTCCCTCCCT
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protein sequence of rna7758

>rna7758-protein ID=rna7758-protein|Name=rna7758|organism=Nannochloropsis gaditana|type=polypeptide|length=168bp
MRQPEGHLVFIKCRCLPAFLADRVEAPGWMAASSGAAAAAAAITNAGKYS
SSAGFKALIRGVVCSTLAVGTGDYICQQLEGSPSKDEPAPRPDSLGKQTA
AQPLSPEPKAWDKERTLRMATATALVMSPMSWVIVMRLERVFPGEGEREG
GRREGGREVGREGETTGK
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mRNA from alignment at CM002473.1:287178..287924-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7758 ID=rna7758|Name=rna7758|organism=Nannochloropsis gaditana|type=mRNA|length=747bp|location=Sequence derived from alignment at CM002473.1:287178..287924- (Nannochloropsis gaditana)
GTGTTCATTTGGTTGGAGCTCTACCTCAATATGGGAAGGAAGTTCTTTCT
CGCCGCGGGCGGCGAGAGGGCTCAGGAGATCCCTCATGGTGGCTAAAGCG
ACCTTCTCCCTTGCTTTTACAAGCTCTTTGCAAAAGTCCCACAAACGGAT
GGGTATCTACATGCTATGAGGCAACCAGAAGGCCACTTGGTTTTTATTAA
GTGCCGATGTCTTCCAGCCTTTCTTGCTGACAGGGTGGAAGCCCCGGGGT
GGATGGCCGCCTCTTCAGGCGCAGCCGCCGCCGCCGCCGCCATCACAAAC
GCCGGGAAATACTCGTCCTCAGCAGGGTTCAAGGCCTTAATCCGTGGTGT
AGTGTGCTCAACACTGGCGGTGGGAACGGGGGACTACATTTGTCAGCAAT
TGGAGGGATCTCCCTCCAAAGACGAGCCTGCCCCGAGGCCTGATAGCCTC
GGGAAGCAGACGGCAGCGCAACCTCTATCTCCGGAACCAAAAGCCTGGGA
TAAGGAGCGGACGTTGCGAATGGCGACAGCGACGGCTTTGGTGATGTCCC
CCATGTCATGGGTCATTGTCATGCGTCTGGAGAGGGTATTCCCCGGTGAG
GGAGAGAGGGAGGGAGGGAGGAGGGAGGGAGGGAGGGAGGTAGGTAGGGA
GGGAGAGACAACGGGTAAGTAAAAAGGGAAAAGCAAAGATAACGACGTCA
TGTTACTGCCTAATGTCGTCATTTGAGGGGAAGCAGTGAATCTGCCA
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Coding sequence (CDS) from alignment at CM002473.1:287178..287924-

>rna7758 ID=rna7758|Name=rna7758|organism=Nannochloropsis gaditana|type=CDS|length=507bp|location=Sequence derived from alignment at CM002473.1:287178..287924- (Nannochloropsis gaditana)
ATGAGGCAACCAGAAGGCCACTTGGTTTTTATTAAGTGCCGATGTCTTCC
AGCCTTTCTTGCTGACAGGGTGGAAGCCCCGGGGTGGATGGCCGCCTCTT
CAGGCGCAGCCGCCGCCGCCGCCGCCATCACAAACGCCGGGAAATACTCG
TCCTCAGCAGGGTTCAAGGCCTTAATCCGTGGTGTAGTGTGCTCAACACT
GGCGGTGGGAACGGGGGACTACATTTGTCAGCAATTGGAGGGATCTCCCT
CCAAAGACGAGCCTGCCCCGAGGCCTGATAGCCTCGGGAAGCAGACGGCA
GCGCAACCTCTATCTCCGGAACCAAAAGCCTGGGATAAGGAGCGGACGTT
GCGAATGGCGACAGCGACGGCTTTGGTGATGTCCCCCATGTCATGGGTCA
TTGTCATGCGTCTGGAGAGGGTATTCCCCGGTGAGGGAGAGAGGGAGGGA
GGGAGGAGGGAGGGAGGGAGGGAGGTAGGTAGGGAGGGAGAGACAACGGG
TAAGTAA
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Synonyms
Publications