|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101273g2.10777.mrna |
| Orig protein id | gnl|cribi|Naga_101273g2.10777 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002473.1 | supercontig | CM002473.1:284182..285614 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7757 ID=rna7757|Name=rna7757|organism=Nannochloropsis gaditana|type=mRNA|length=1187bp
TCAGGTCGATGACTAACGCGGAAGCCCGTCGTCCCCTTCACTCCTCCCTC
CTCTCCCTCCTCCTTTTGCTGCCAAGCAGCTTCCTGACTGCGCGTGCTTT
CTTGCACCCGTCGTTTCCTTCCCTCTCCTCCACCCGTATGCAAACGCCCA
CCGGCCGTCGCCACCGGACCGAGGGGGTGCGCATGGCAGTCGGCGCCAAA
GGCGAGTACGCGGTCACCTTGCTCCCTGGTGATGGAATCGGGCCCGAGAT
CATGACGGCCACGGTCGGGGTGCTGGAAGTGGTGGCTGCCAAGGCAAGCT
TCAAGTTCAAGTTTCAAGACGCCTTGATTGGCGGGGCGGCCTTGGATGCC
ATGGACGACCCTTTCCCCGACACATCCCTCCAAGCCTGCCAGTCCAGCGA
CTCGGTCCTATTGGCCTGCATCGGCGGGTACAAATGGGACAAGAACCCGC
GGGAGAAACGTCCGGAAACGGGGTTGTTGAAAATGAGGAAGACCTTGGGT
TTATTCGCCAATCTACGCCCGGCCAAGGTCCTCCCTCAGCTCGTGTCTGC
CTCCACGTTGAAGCCGGAGGTGGTCTCGGGAGTGGACATCATGGTGGTGC
GGGAGTTGACCGGGGACGTGTACTTTGGCACGCCCAAGGGGATCCGAACA
GGGTCGGACGGCGAGCGGGAGGGCTTCAACAACATGATCTACAAGGAGAG
TGAGATCCGGCGCATCGCCCAAGTGGCCTACGGCGTGGCCGAAAAACGCG
GGAAAAAATTGTGCTCGGTGGATAAGGCCAACGTTCTGGACGTCTCCCAG
CTCTGGCGGGAGGTGGTGACCGAGGAAGGGCTCCGGCACCACCCCGACGT
CGCCTTGGAGCACATGTACGTGGACAACGCGGCCATGCAGCTCATCCGGA
ACCCGAAGCAGTTCGACACCATCGTCTGCGGGAATTTGTTCGGGGACATC
CTCTCGGACGAGGCCTCCATGCTCGTGGGCTCCCTGGGAATGCTCCCCTC
GGCGTCCCTTGGCGACCCTCGAGGCCCCGGCGTCTTCGAACCCTGCCACG
GATCCGCCCCCGACATCGCGGGGGAGGACAAGGCGAACCCGTTGGCGATG
ATCCTCTCGGCGGCGATGATGCTCCGCTACGACTTGAGTCAGCCCCAGGC
CGCGGAGGCCTTGGAGGCGGCCGTGGAGCGGACATGA back to topprotein sequence of rna7757 >rna7757-protein ID=rna7757-protein|Name=rna7757|organism=Nannochloropsis gaditana|type=polypeptide|length=221bp
MSSAHVHTRLVSPGSLSSRHPPLLSSFPPAHVRRARGKEPVDGDTHRPLV
LCHHLLRPSLPPVVRQLAHILPRRLDSPPLVWVDSCLRLLLLPLLLRRSS
TRPFYKATPIRAQAHGRDEAPLLQGRGREVVEYARVTPPSLHRGAEPARR
PGPGSESWRPHPPRHQYLHRGHGPCPAPDRHGGGAGGLPAPPPTRLARSW
GGEPPSRAPHAPPLRPRGGVT back to topmRNA from alignment at CM002473.1:284182..285614+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7757 ID=rna7757|Name=rna7757|organism=Nannochloropsis gaditana|type=mRNA|length=1433bp|location=Sequence derived from alignment at CM002473.1:284182..285614+ (Nannochloropsis gaditana)
ATCGATCGGCTCGGACTTGCTGGGGGCTACTGTCCTGGCCACACACCTGT
ACCCAACCTGCTCGATATAAAACGTAATAACAGCACAATCCCACCAGGAC
CAAAACTTCCCACGAATAGCTGGTGAGAATTTTAACATGGAACACTCATT
AAGCACAAGAACACATCCCATTTGACCCGTTTTTGCCTTTTTGCACTCGG
TTACCTCGCATAGCTCAAGCctttacctccccacctACGGGACTCGCCGA
GGCAACTAGACAGCACCGCTTACAAGTTTAGGCACATACTTTCTCAAAGG
ACGGTCAATGACCCGACTTCATGACACCGGCTTGTGCAGTGTCTTGTCGT
TTCTAGAGGTGCACGCGAGTGAGACCCTTTCCGCCGGTCCCCAGTCAAGG
AAAGCTTTCAAGCTAGGAAGTCAATGTTATTCCCTAGGCTCCACCGGTCT
CCTTTGGCTTATTTTTCCACGCTCCAAATTACATACCCACAGGCGTAGTG
CGTCTTACATGTGAAAATTGGTGCCTTGACTGTGAAAATtattcttttcc
ttgcttgtTGGGTTTTAAACATGTCCTCAGCCCACGTTCACACGCGCTTG
GTTTCCCCtggctccctttcctcccgccaccctcctctccttagttcctt
cccacccgcgcATGTccggcgggcgaggggaaaagagccgGTGGACGGAG
ATACACATCGTCCTCTTGTCCTTTGTCATCACCTTCTGCGGCCGTCTCTA
CCGCCGGTGGTCCGCCAGCTTGCACACattctccctcgtcgcctcGATTC
GCCGCCGCTTGTTTGGGTCgactcctgcctccgcctcctcctcctgcccc
tgctcctccgccggtcGTCCACCAGACCCTTTTATAAGGCCACGCCCATC
CGTGCACAGGCACACGGGCGAGACGAAGCGCCGCTCTTGCAGGGACGAGG
CCGCGAGGTCGTCGAGTATGCCCGCGTtaccccaccttccctccatcgag
GTGCTGAGCCAGCGCGTCGTCCGGGTCCTGGGTCTGAATCCTGGCGCCCA
CACCCTCCAAGGCACCAATACCTACATCGTGGGCACGGgtagggcgggcg
ggagggaaggagggcgggagctcAAGAGCATGTGGAAGGCCTGGTTTCTT
GGCGTAAATGCGTTGAGGATACGTGGCGAGCAGGAATGAGGACATGacca
ccgcccctccctccctccctccctccccccctccccttacAGGCCCTGCC
CGGCTCCTGATCgacacgggggaggggcgggcgggctacctgcccctcct
ccaacgcgcCTTGCACGAAGCTGGGGCGGAGAGCCTCCAAGCCGTGCTCC
TCACGCACCACCACTACGACCACGTGGGGGGGTTACCTGACGTCCGggcc
gccttccctccctccctccctccctccctccct back to topCoding sequence (CDS) from alignment at CM002473.1:284182..285614+ >rna7757 ID=rna7757|Name=rna7757|organism=Nannochloropsis gaditana|type=CDS|length=1332bp|location=Sequence derived from alignment at CM002473.1:284182..285614+ (Nannochloropsis gaditana)
ATGTCCTCAGCCCACGTTCACACGCGCTTGGTTTCCCCtggctccctttc
ctcccgccaccctcctctccttagttccttcccacccgcgcATGTccggc
gggcgaggggaaaagagccgGTGGACGGAGATACACATCGTCCTCTTGTC
CTTTGTCATCACCTTCTGCGGCCGTCTCTACCGCCGGTGGTCCGCCAGCT
TGCACACattctccctcgtcgcctcGATTCGCCGCCGCTTGTTTGGGTCg
actcctgcctccgcctcctcctcctgcccctgctcctccgccggtcGTCC
ACCAGACCCTTTTATAAGGCCACGCCCATCCGTGCACAGGCACACGGGCG
AGACGAAGCGCCGCTCTTGCAGGGACGAGGCCGCGAGGTCGTCGAGTATG
CCCGCGTtaccccaccttccctccatcgagGTGCTGAGCCAGCGCGTCGT
CCGGGTCCTGGGTCTGAATCCTGGCGCCCACACCCTCCAAGGCACCAATA
CCTACATCGTGGGCACGGGCCCTGCCCGGCTCCTGATCgacacgggggag
gggcgggcgggctacctgcccctcctccaacgcgcCTTGCACGAAGCTGG
GGCGGAGAGCCTCCAAGCCGTGCTCCTCACGCACCACCACTACGACCACG
TGGGGGGGTTACCTGAATGTCCTCAGCCCACGTTCACACGCGCTTGGTTT
CCCCtggctccctttcctcccgccaccctcctctccttagttccttccca
cccgcgcATGTccggcgggcgaggggaaaagagccgGTGGACGGAGATAC
ACATCGTCCTCTTGTCCTTTGTCATCACCTTCTGCGGCCGTCTCTACCGC
CGGTGGTCCGCCAGCTTGCACACattctccctcgtcgcctcGATTCGCCG
CCGCTTGTTTGGGTCgactcctgcctccgcctcctcctcctgcccctgct
cctccgccggtcGTCCACCAGACCCTTTTATAAGGCCACGCCCATCCGTG
CACAGGCACACGGGCGAGACGAAGCGCCGCTCTTGCAGGGACGAGGCCGC
GAGGTCGTCGAGTATGCCCGCGTtaccccaccttccctccatcgagGTGC
TGAGCCAGCGCGTCGTCCGGGTCCTGGGTCTGAATCCTGGCGCCCACACC
CTCCAAGGCACCAATACCTACATCGTGGGCACGGGCCCTGCCCGGCTCCT
GATCgacacgggggaggggcgggcgggctacctgcccctcctccaacgcg
cCTTGCACGAAGCTGGGGCGGAGAGCCTCCAAGCCGTGCTCCTCACGCAC
CACCACTACGACCACGTGGGGGGGTTACCTGA back to top
|