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Properties
| Property Name | Value |
|---|
| Product | rio kinase 1 |
| Orig transcript id | gnl|cribi|Naga_100184g4.5705.mrna |
| Orig protein id | gnl|cribi|Naga_100184g4.5705 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002473.1 | supercontig | CM002473.1:258437..260389 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7749 ID=rna7749|Name=rna7749|organism=Nannochloropsis gaditana|type=mRNA|length=1495bp
CCAAGATTTTTCCTCCAAAAATTTTCAGGAGGGTCTCGCCGTCTGCCCTT
GCCCGGGGCGACCTGGTTATCAAGTGTCACTCCTTTGTGACTAGGAAAAC
ATCTTAAGTAGAAAAAGGGCAAATAGTCAGGGTCAGACTTCTGAAAAGCA
ATGTTAGCCTTATGTCACATGGATAATTTCTGACCCGATGTCTGCGCTGG
CCATAAATCGCACCACATTAATTATCTGTCGGCGGAGCCGTCGTGTCTGG
CAACGGCAGGCGGGGGACGATCGCAAGGCTTGTTAACACACGATAGCCTA
CCACGTCGACACCCCCGGGTCTGACTTGCCTGTTGTATGAGCCATGACGT
CGGGGGTCCTGTGACCAGATGTGTCTCTCCGACCTCTCCCGTTCCAGCGT
CCTGCGCCTCTGAACAACTTTCTACCTCAACTTCTTGACATCCTACGTGA
ACGGCATCGAGCGTGTACGAAGTTCCACTCACCTTGTCATTTCTGGCTCA
CTGCCTCGTTACAGGCGAAGTAGCGAGGTGTCGTAGGCAATCGGGACATC
TCCTCTGCCTCGTTCTCAATTGTCGCAGTACTTGCTTCGGCAGTCAATCT
CTGGTGTGCCGGGCACGTGATCCTTGCCTGCCAACGGATACAAGTCAACC
TTTCGGCGCGCGCGGTCGCCACGCTGTCATTCCTAAAAGCGTGCATTACA
GCCGCACACCCCTGTCAGAAGGACTTGTCACGGGCAGCATAGCTTCGGGC
GCTCGGACTACCATCAGAACTCGTCAACCTCTGATGCCCGATATACTCAG
GGACTCCCAAGCCGGTACCTCCTCCATCGCCCCTGAAATCGTTCGGCCCG
CGCCCCATGGTGCCGGGATGCGTGTAAGAGAACCGCATCTGGTTCCTATT
CCTTCCAGAGGAGAGGCAAGAGTCAACGATCTTCACAGGCCGACAGCGCG
TTGTGGCGCGGTACCTCCTCCCCCCTCCCTCTCCCTCACCCTCGCCCTGG
ACGCCGTTCTGGTCCTGCCTCAATGGCCCCGCGTCCTTCCTCACGAAGGG
GCGGTGGATGTCTTCCCTCTGCCGCAAGCGGGCACAGCTCTGGTGGAGGG
AATGGAGGAAGGGTTGGAGGAGAAGGACGAGGAGGATATGCTGCTGCCTG
TGGGGCCCGCTCTTTTTCGGCGGACGTGTGCGGTCCTGGTCGCGAGGGAA
GAAGGGGGGGGAATGGAGGAGGACGGGGAATTAGAGGAGGGCCGCCAGCC
CTTGTCGCCGGTGCGTCGGGACTCAAACGGAAGTGGAGATCCCTCTTTTT
TCAAACTATCGGCCCCGGAGTTATCCTCGTCACATGGGCGAGCAGTGGCT
GGACCAGGCCCACAAGAGCAACAATGACAAGATCGAAATTAGAGGTGGAG
AAAGGGGTGGAAAAATCCGGGACGGGCGGCATGTATAAGTACACACACGT
CGTAACAAAGTGACAAAAAATGATGCGTGACCAATGAGGCGTTGA back to topprotein sequence of rna7749 >rna7749-protein ID=rna7749-protein|Name=rna7749|organism=Nannochloropsis gaditana|type=polypeptide|length=636bp
MAALGLPPPPRTDTTIEGQFDDASDENDTIHTENHLQDLANGLSLTNLQL
ASPFDEDQTRGSRHVKTHTDKDHDHFETEQDDDEDGLEDEYADLEGLLLG
EGSEAMLGGGTRGWGGASAAAAAARLESHRSVNLSQSVRNDITRSERTAE
KRVTHTGRDERATTEQVLDPRTRLILWRLLSKGFLASIDGCLSTGKEANV
YYAQDPAGKAYAIKVFKTSILVFKDRDRYVSGEFRFRHGYCRSNPRKMVK
LWAEKEMRNLRRLAAAGIPAPRPVVLKGHVLVMDFVGTGGWPAPRLKDVQ
LGPRRLEEAYWSCLGYMRRLHHDCRLVHGDLSEYNLLYHEGQVIVIDVSQ
SVEHDHPQAWDFLRKDCLNVNAFFQRRGVRVAGTRRTFDFVVDGGLGTSQ
EEVKAALKSLKETVDEEQEGGPEEGRGEGRRDEKEEEERLKERQEEAVFM
KSYIPRSLHELPNSFEEARRIEAGEREQVYAAAVREMLVPAKQERRQAAC
ESEGEARRAEGVAEEEEAREDMRAKMKAFAKEESEEEEEEEEEEEEEEEE
EEEGTDEDEDEDEDEGRNEEKEWLEKKKGGMSGRGLTEEERKAAKAQRKA
DKKAVKADQQERRKTKIPKHVKKSRIKATSGARKKR back to topmRNA from alignment at CM002473.1:258437..260389+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7749 ID=rna7749|Name=rna7749|organism=Nannochloropsis gaditana|type=mRNA|length=1953bp|location=Sequence derived from alignment at CM002473.1:258437..260389+ (Nannochloropsis gaditana)
ACAGGTCCTCTGAAGGTATCTTTGGCTGCATCACTTTTTTGGATGGCAGC
TCTCGGGctacctccaccaccacgaacGGACACCACGATTGAGGGCCAAT
TCGATGATGCTAGCGATGAAAACGACACAATACATACTGAAAACCACCTT
CAAGACTTGGCAAATGGTTTATCTTTGACCAACCTGCAGTTAGCATCCCC
CTTCGACGAGGATCAAACGCGCGGATCACGACATGTGAAAACTCACACCG
ACAAGGACCATGATCATTTTGAAACCGAGCAAGACGATGATGAAGATGGA
TTAGAGGACGAGTACGCAGATTTGGAGGGGTTACTGCTCGGTGAAGGGTC
GGAGGCGATGCTTGGAGGAGGTACacgaggatggggaggcgcctctgctg
ctgccgcagcTGCTCGATTGGAAAGCCATCGCAGCGTAAATCTGTCCCAG
TCCGTGCGAAACGACATCACAAGAAGCGAGAGGACGGCCGAGAAGCGGGT
CACACACACGGGGCGTGACGAGCGGGCCACTACAGAGCAGGTGTTGGATC
CACGCACGCGCCTCATCCTCTGGCGGTTGCTAAGCAAGGGCTTTCTGGCC
AGCATTGACGGCTGTCTGAGCACGGGGAAAGAAGCGAACGTGTATTATGC
CCAAGACCCGGCGGGGAAGGCCTACGCGATCAAAGTGTTCAAGACCTCAA
TCCTGGTCTTCAAAGACCGGGACCGGTACGTGTCGGGCGAGTTTCGGTTT
CGGCACGGGTATTGTCGGAGCAATCCCAGGAAGATGGTCAAACTgtgggc
ggagaaagagatgcgGAATCTGCGTCGTCTCGCAGCCGCCGGCATACCAG
CGCCGCGGCCGGTGGTGCTGAAGGGGCACGTCCTCGTGATGGACTTCGTG
GGCACGGGAGGGTGGCCAGCACCGCGGTTGAAAGACGTGCAGCTGGGGCC
TCGGAGGCTCGAGGAGGCCTACTGGTCTTGCCTTGGCTACATGCGGCGGC
TGCATCACGACtgccgcctcgtccacggggATCTGAGCGAGTACAATCTG
CTGTACCACGAAGGCCAGGTGATCGTGATCGACGTCTCCCAGAGCGTGGA
GCACGACCACCCTCAGGCCTGGGACTTTTTGCGGAAGGATTGTTTGAATG
TGAACGCCTTTTTCCAACGGAGAGGGGTGCGGGTGGCGGGGACGCGGCGG
ACATTCGATTTTGTGGTGGACGGGGGCCTGGGGACctcgcaggaggaggt
gaaggcggCGTTGAAAAGCTTGAAGGAGACTGTGGatgaggagcaggagg
gaggcccagaggaagggagaggggaagggcgaagggatgagaaggaggaa
gaggagaggttgaaggagaggcaggaggaggcggtgttCATGAAGAGCTA
CATTCCTCGTTCGCTGCACGAGCTGCCCAACAGCTtcgaggaggcgcggc
ggATCGAGGCCGGGGAGCGGGAGCAAGTGTATGCGGCAGCCGTGCGGGAG
ATGTTGGTTCCGGCGAAGCAAGAGCGACGGCAGGCCGCGTGCGagtcgga
gggggaggccaggagggcggagggggtggccgaggaagaggaagccagAG
AAGATATGCGTGCGAAAATGAAAGCATTtgcaaaggaggagagtgaggag
gaggaggaggaggaggaggaggaggaggaagaagaggaagaggaggagga
gggcacagatgaagatgaagatgaagatgaggatgagggcaggaacgagg
aaaaggagtggctggaaaagaagaaagggggaatGAGTGGTCGAGGTTTG
acagaagaggagcggaaaGCCGCCAAGGCCCAACGGAAAGCCGACAAGAA
GGCAGTGAAGGCGGATCAGCAGGAGAGACGCAAAACCAAGATCCCCAAAC
ACGTGAAGAAAAGCAGGATTAAAGCAACGTCGGGCGCGCGAAAGAAGCGG
TAA back to topCoding sequence (CDS) from alignment at CM002473.1:258437..260389+ >rna7749 ID=rna7749|Name=rna7749|organism=Nannochloropsis gaditana|type=CDS|length=1911bp|location=Sequence derived from alignment at CM002473.1:258437..260389+ (Nannochloropsis gaditana)
ATGGCAGCTCTCGGGctacctccaccaccacgaacGGACACCACGATTGA
GGGCCAATTCGATGATGCTAGCGATGAAAACGACACAATACATACTGAAA
ACCACCTTCAAGACTTGGCAAATGGTTTATCTTTGACCAACCTGCAGTTA
GCATCCCCCTTCGACGAGGATCAAACGCGCGGATCACGACATGTGAAAAC
TCACACCGACAAGGACCATGATCATTTTGAAACCGAGCAAGACGATGATG
AAGATGGATTAGAGGACGAGTACGCAGATTTGGAGGGGTTACTGCTCGGT
GAAGGGTCGGAGGCGATGCTTGGAGGAGGTACacgaggatggggaggcgc
ctctgctgctgccgcagcTGCTCGATTGGAAAGCCATCGCAGCGTAAATC
TGTCCCAGTCCGTGCGAAACGACATCACAAGAAGCGAGAGGACGGCCGAG
AAGCGGGTCACACACACGGGGCGTGACGAGCGGGCCACTACAGAGCAGGT
GTTGGATCCACGCACGCGCCTCATCCTCTGGCGGTTGCTAAGCAAGGGCT
TTCTGGCCAGCATTGACGGCTGTCTGAGCACGGGGAAAGAAGCGAACGTG
TATTATGCCCAAGACCCGGCGGGGAAGGCCTACGCGATCAAAGTGTTCAA
GACCTCAATCCTGGTCTTCAAAGACCGGGACCGGTACGTGTCGGGCGAGT
TTCGGTTTCGGCACGGGTATTGTCGGAGCAATCCCAGGAAGATGGTCAAA
CTgtgggcggagaaagagatgcgGAATCTGCGTCGTCTCGCAGCCGCCGG
CATACCAGCGCCGCGGCCGGTGGTGCTGAAGGGGCACGTCCTCGTGATGG
ACTTCGTGGGCACGGGAGGGTGGCCAGCACCGCGGTTGAAAGACGTGCAG
CTGGGGCCTCGGAGGCTCGAGGAGGCCTACTGGTCTTGCCTTGGCTACAT
GCGGCGGCTGCATCACGACtgccgcctcgtccacggggATCTGAGCGAGT
ACAATCTGCTGTACCACGAAGGCCAGGTGATCGTGATCGACGTCTCCCAG
AGCGTGGAGCACGACCACCCTCAGGCCTGGGACTTTTTGCGGAAGGATTG
TTTGAATGTGAACGCCTTTTTCCAACGGAGAGGGGTGCGGGTGGCGGGGA
CGCGGCGGACATTCGATTTTGTGGTGGACGGGGGCCTGGGGACctcgcag
gaggaggtgaaggcggCGTTGAAAAGCTTGAAGGAGACTGTGGatgagga
gcaggagggaggcccagaggaagggagaggggaagggcgaagggatgaga
aggaggaagaggagaggttgaaggagaggcaggaggaggcggtgttCATG
AAGAGCTACATTCCTCGTTCGCTGCACGAGCTGCCCAACAGCTtcgagga
ggcgcggcggATCGAGGCCGGGGAGCGGGAGCAAGTGTATGCGGCAGCCG
TGCGGGAGATGTTGGTTCCGGCGAAGCAAGAGCGACGGCAGGCCGCGTGC
Gagtcggagggggaggccaggagggcggagggggtggccgaggaagagga
agccagAGAAGATATGCGTGCGAAAATGAAAGCATTtgcaaaggaggaga
gtgaggaggaggaggaggaggaggaggaggaggaggaagaagaggaagag
gaggaggagggcacagatgaagatgaagatgaagatgaggatgagggcag
gaacgaggaaaaggagtggctggaaaagaagaaagggggaatGAGTGGTC
GAGGTTTGacagaagaggagcggaaaGCCGCCAAGGCCCAACGGAAAGCC
GACAAGAAGGCAGTGAAGGCGGATCAGCAGGAGAGACGCAAAACCAAGAT
CCCCAAACACGTGAAGAAAAGCAGGATTAAAGCAACGTCGGGCGCGCGAA
AGAAGCGGTAA back to top
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