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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100184g3.5704.mrna |
| Orig protein id | gnl|cribi|Naga_100184g3.5704 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002473.1 | supercontig | CM002473.1:256539..258033 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7748 ID=rna7748|Name=rna7748|organism=Nannochloropsis gaditana|type=mRNA|length=5890bp
ATGGCCTTGCAGTGCCTGTGGAGGGAGCGGGCCTCCCAGCCCATCTCCTC
GCGCTACACCCAGGCGGTGTTGGAGCTGTGGGCGAGCGTGGCCTCTGCCT
GTGAGCGGGCCGGGGTGGAGTGGGCCGGTCCTAGGTCCTGCTCCTCCCCG
GCGGCCGATCCCTCCTTGCCTTTGGAGCCCCCCCCCTCGCCGGAAGAGGG
AGCGGAAGGCCCCCACCCACGGTGCCGGGAGTGGGAGGAAGGGATAGTCG
CGAGCGACCAGGGCTGGGAGGTATTGACGGGACGCGTCACCCAGGTCCGC
TCCGGCTGGTCGCGGCCCCGCCGGTTCTCCCTGCTGAGAGAGGGGGGCTT
GGACGGGGGGGAAGGGCCTCCCTGCCTGCTCCCGGGGAGGAAGGTGATCC
GGGGCCCGGACTGGCCGGGAGGGGGGCAAGGGGCGAGGACGTCAGATACG
TCTGGTGAAGCGGGGGCGGAGGAGCGGATGAGGAGGGGAAAGGGCCGGGA
AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGG
AAGAGCGCATGAATGAGGATATGGAAGAGGAAGAGGAAGAAGAGGAAGAG
GAAGACGAGGAGGAGGAGCAAGAAGAAGAGGAAGACGAGGAGGAGGAGGA
GGAGGAGGAAAACACTGAGGAAGATGGGAATGAGGACGAGGAGGAGGAAA
ACACTGAGGAAGATGGGAATGGAAGGGAGAAGGTCCGAGCAGGCGGGGAC
GTGGACCAAGACCACAGGCAAGGCGCGAGTGCAGGGAGCGAGGCCGAGAA
GGAAACGTTGGCGGCGCCCGCCTCGAAGCCCGAGCCCCCGATACTGGGCG
TCGTGGAGGAAATATTGGCCTGGAATGGGGAGGGAGGCCTGGCGCGGCGG
GTCCGATGGGCCAACGGGGAGACAGGGGTCTACCGGTGGGGCGCGAACGG
CGCCTTCGACCTGACGCACGTGGAGGTGGCTCGGGACGGAAAGACGATTC
TGCGGCGGTACCCTCATCCGAGCACTGCCGAGGCCGTCGCGGTCCGTCAC
GGTTTTGGGGAGGGGGGGGACTTCGGCCTCATCTTGTGGATCCGCCCGGC
TGCGGGGGGAAGCAAGAGCCCAAGGGCGCCGCGTCGCTTTCAAGGCATTT
GCGAGTGGCCCGACCAGGGAGCCATGACCGCAGTTACGGGCACCAAGGGC
CCGGATGGCTCCCTCACCTTCACGGAGGACCGCTTGCTCGCGGGCTCCGA
CCTGGTCTGGACCCGTCGCTTTGGCTCCCCGGCCTGGCGCCCGGGCCTGA
CCTACCGGCTGCGGCTGCTCCCTTCCACGGAGACGGGGGAGGAGAAGGAG
CTGTGGAAAGGCCAGTGCGAGTTTGAGAGCACGGTCAAGCTGGGGGGGGA
CCGGGTGGCCGTGCGGGAAGAGGTGCATCTCCAGGCCCGGGACTTGTTCG
TGCTGGACAAAGATGCCAAGGCCGGGGGCATTTCTGTCTCGGAGGACGGC
CTCTCTGCCTCATGCTCCTCCAGTGAGAGCAAGGCGTTGGTCTACGGCTC
CCTGGGCTTCGCCCGCGGCGTCCACTATTGGGAGGTCAAGGTGGAGCAGG
AGGAGATCGGGTCTATCTTCCTGGGCGTGGCGGAGAAGCCGGACATGATG
GCTCCCGGGGCGGCGGCGGCCTTGCGGGGGGCCATGCACCGTTGGCACGG
CTACGGGTTTATCAATTATCGGGCGAGTTTTGCGTGGAACCCGGCGGAGG
GCGGAGGGATCGGGATTGGCGGGGGGGCGCTGGGAGGCCTGGGGTCGGCA
TTGGCGGCGGTGAGTCCGGAGCGACCGTACGGGGAGAACTTCCAGGCGGG
AGACATGGTGGGGATTAAACTGGACATGGACCGGGGCGTCCTGTCCTTCT
TCTTGGACGGGATGAAGTACGGCGAGCACATCCTGGCCGACCTGGGGGTG
GCGCACGAGAATTTGTTGGGCTCGCGCCCGCGCGTGCGGCCTCGGGTCCT
CTACCCCGTGATCGGATTCAGGAAAAAAGGGGACCGTGTGACGCTGACGA
ACCGGTGGCTGAGCACGCCGGGGCTGCACCCCCGGGTCGTCTTGGAGGAC
GTGCAGGCCGTGACCACGCTGCTGCACGCGTGGGAGATGAACCACCGGCA
GCAAGGGCCGACGAAGGTACTCGCCCCCGCCCAAGAGACCCGCCCCGAGG
CCAAGACGCTTCCTGACCATATCCCTGACTGGGCCTACCGGGAGGCCTGG
TGCGATTGGCGTCGATGGCGGCTCGGTCGCTGGCGCCGGATTTTGACCCG
CGCGCAGTCCCCGGCCTGGGTGGACGTGGACACCTCCATAGACGCCTGCG
TACGGGCGAGTTTGCTCCTGGGCATCCCACAGCCCCTCCTGGCCGGCGAC
CGCGTCCGAATGTTGCGCCGGTGCGGAAAGATCCTGGAGCAGCCCGAGAC
CCGGCTGGTGCTTGGGGCCTATCGAGGCTTGCTATGGTACCGGGCCCTGG
ACGCACCTCGGGAGGGAAGCGTCGGCGGGGGCGGGGAAGGAGGGGGGGCC
ATGGCTGCCTGGTCGTGGCAGCCTTGCGACGTGGACGGGCTGGAGCTCTT
CTCGCGCGCTTGGAAAGGGCCACTGGCAAGTCTGGCGGCGTCGGCGGGAG
GAGGGGAGGCGATGACGCCCTCGCCCCTTCCTCTCCTCCCCTCTTTGCCG
TACTTGCCCATGTTCGAGGGCGGGAAGGTCCAGGTCGTCTTCGATCAGGC
GGTGGTGCGGGAGGGGCTCGAAATCGACGCGAGCGAGAAGCTTGGGGAGG
TGGAGCAGGAGACTGTGCTGGACGCGCTCGAGCGCCGCGTCAACAGCTCC
AACATTGCACGCTTCCGCATCGACTTCCATGGCCTGGAGGGCTGGATCTC
CGAGAAGATTCGAGGGGAGCGGGAGGATTTGATTGTGCGGCGCGTGCCGG
ATACATCGCAGGGCGAAGGGAGGGCGGAGGGAGGGGCAGAGGGGGGGGGA
TTGGAGGCTCAGCTGCAGGCGGCAGTGCGGGATTGGAAGCGGAAAGTGAC
GGGGATGGTGGGGCAATCACAAGCGTCAAGCACTGATGAGGATCCTATGG
AGACCGAGACGCAGACCCTCCCCTCCGTCGGTGCCTCCTTACCGCCCCCT
TCTCTTGCCGTGCCCGACCCGGAAATGGTCTGGTGCAGCGAGGACGTGGA
CGAGAGGTCAGAGGGGGAGGGCGCGGGGGAGGGTGCGGACCCGACGGGCG
CCTTCCCGGGGTACTGGCGCTCGGCCCGATTCATGCGGGGGGGCGAGGAA
GGTAGGGAGGGAGGGAAGGAGGGAGAGGTGTGCCACCCCGTGCCTTGGAC
GTTGGAGGCGGACGAGCAGCTCACGCAGCTCTTGAACGAAGCAGCCACGG
CACAGGGCGAGACACTGCCCTTGAACATGAGCTACGCCGCGCTCGCGTCC
TTACTCCTGCAGGCGCACCGGGAGGAGCAGCGAGGCGCACGGGAGGACGG
AGGAGGCATCTTCCGTCTCGCCCATGGCCGGGGGCCACTTAGCGACAAGC
CTGCCTTGCGCGGGCTTTCCCCCCACAGGCTCCTGGCTCGCGCCTCCCTC
CTTCGCGTCCTCAATCAACGCCTCTCTCGCGCCCTGCCCTTCCTGTCCCT
CGCCCTCCCAGAACAAGGGTGGGAAAGGGAGCAGGCGGGCGCGTCGGAGC
CCATGGTGGTGGAGACGACCTACCCCCTCGGCTCGACGGGGCCCCGGGGA
GGAGGGCCGCAGGGGCCGGAGCGTGCCCAAGGGCCGGGGGTCTGGCAGCC
TGCTTGCACGGCCCGGCGGCTTCGGGCCTTGCGGAAGTTGGTGCTGACGT
CCACCAAGCGGACCCACTGGGAGACGATGCTGCAGGCCACCACCACGCCC
ACGCCCTTGCATCAGGACGAGTACGAGGACCCCCGGGACATCAAGACGAT
CAAAATCAACCGCGTCCGCGCCTCTGCCTCCCGCCTCGCCTCGATCCGAA
ACATGAACGAGCGCTTGCGCTTGTCTGTGTTCGGGCAGCTCCACAAGGAA
ATGCGGGCTTGGGCGCATTCGAGCTTCCGACGTGCCTACCTGGGGAAAGG
ACACGGCGGTCAGAAGCGCGCGTTCAAGGTTCGTTTCCTGGGCGAGGGTG
TGAACGACTACGGAGGCCCATACCGGGCTATCTTCGAGCAGGTGGTGGAT
GAGCTCCAAGACGACCGGCACCTGCTTCCCCTCTCTGCGCCCTCGCGCCA
CCGACCAGGGGGAGAGAAATGCCTCCTGCCTCTCCTGGTGCCCTGCCCGA
ACCGAGCCGGCGCCGTCGGACCCAACCAAGACAAGTTCGTCTTCAGCCCA
GGCCCGCCCTCCCCGCTCGCACTGGAGCTGATGCAACTTCTGGGCAAGAT
GGTGGGGATGGCGCTGCGACACGGCCTTCCGATGGGACTGGACCTTCCTG
CCACGGTGTGGCGGCCTTTGGTGGGCTTGCCCTTGCAACGCGACACGCTC
GGCTCCCTGGACGTGCTCGCTGTCAAAAATTTGGAGCAGGTGGAACGGAC
GGCTCAGGTGGCGGAGGCTCGGGCGGGAGGCGCGGGGCCCGAAGGGACGA
CGGCATCGAGCAGCTTGGTCCCGGAGGGATGGGAGGAGGAGCTGACCTTC
TCCACGCACTTGAGCGACGGCTCCCTCGTGGTCCTGCCGCACGCACGCTA
TCTCTCGGCGCCCGGGGGCGTGGACTTGGAGCAGGAACCGGCGCGTGTGA
CACGGGCGAACTGGCAGGAGTATGTGCGGTTGGTGGAGACAGTGCGTTTG
AAGGAGAGTGCAGCCATGATGGGGGCCTTTCAGGAGGGGATGGCCGCCGT
CGTGCCTCAGGAATTATTGCCGCTTTTCACGGAGGAGGAAGTGGAGCAGC
TGATCTGCGGGGTGCGGGAGGTCGACGTGGAACTCTTGAAGAAATGCACG
GACTACGAGGACGGCGTGGACCCAGACGCCCCGCACGTGAAAGCTTTCTG
GGAAGTCTTGGAGGAGATGCAGGCAGAGGAGCGCACAGATTTCCTGCGCT
TTGCTTGGGCCCGGTCACGGATGCCAGCCTCGGCCAAGGACTTTCCCATG
AATTTCCGGCTACAGGGGCCGCAGGGCGGAGCGAAGGAGAAGCCGGACGA
CTACCTGCCCCACGCCCAGACCTGTTTCTTCTCCTTGAGTCTTCCTCAAT
ACTCGAGCAAAGAAATCTTACGCGAGAAGCTTCTGTTGGCTATTTCTAAC
TCTCCCAATATGGACGCAGACGTCCGATTGCACACAGCGGAAGGGTGGTC
GGAAACATGAAGGAAGAAAACACAACAGGTGCCTGACGGAAGAAAGAAGC
TCAAGGAGAAGATGATAATAAAAGATCATCAAGTAACAAGTAACGAAAGG
AGGGGAGGAAGAAGGCGAAGACGAAGAAGATAGCAAAGAAGAATAGGAAA
AAGAAGAAGAGGAAGAAGATGAAGAATAGGACTAGGAAGAATGGACATTG
CCTCTTCATGAATAGACACAGGTAGTCAATTTGTGTACAGACGCCACATA
AAACTGAAAGGAAACTTATCGATATTTCAAAGCCTGTGCCGAGAACACGC
CCTTCTTGAGAAGAGAAGTAGATTGAGGGAGAGGGGTGCGAAAAGGAAGG
TTTCTCAAGTGGACCTATACGATGTAAAATCTCAGCGAGACATATACATA
AGTGGGTAATTTAGAGACATGAGTAAGATACAATGTGGAGAGGATCCAAA
GATAAAGAAAGACACATCAACCGAAAATGATATTGACAAAGTAAGCTGGT
GGGAAGGGTTTCGGAAGAGAGACAACTTTCAGTCGACGGCATTGACTGCT
TGGCTGTGTCGGACTAGTACTGCTATTAGTATTAGTAATT back to topprotein sequence of rna7748 >rna7748-protein ID=rna7748-protein|Name=rna7748|organism=Nannochloropsis gaditana|type=polypeptide|length=197bp
MPDILRDSQAGTSSIAPEIVRPAPHGAGMRVREPHLVPIPSRGEARVNDL
HRPTARCGAVPPPPSLSLTLALDAVLVLPQWPRVLPHEGAVDVFPLPQAG
TALVEGMEEGLEEKDEEDMLLPVGPALFRRTCAVLVAREEGGGMEEDGEL
EEGRQPLSPVRRDSNGSGDPSFFKLSAPELSSSHGRAVAGPGPQEQQ back to topmRNA from alignment at CM002473.1:256539..258033- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna7748 ID=rna7748|Name=rna7748|organism=Nannochloropsis gaditana|type=mRNA|length=1495bp|location=Sequence derived from alignment at CM002473.1:256539..258033- (Nannochloropsis gaditana)
CCAAGATTTTTCCTCCAAAAATTTTCAGGAGGGTCTCGCCGTCTGCCCTT
GCCCGGGGCGACCTGGTTATCAAGTGTCACTCCTTTGTGACTAGGAAAAC
ATCTTAAGTAGAAAAAGGGCAAATAGTCAGGGTCAGACTTCTGAAAAGCA
ATGTTAGCCTTATGTCACATGGATAATTTCTGACCCGATGTCTGCGCTGG
CCATAAATCGCACCACATTAATTATCTGTCGGCGGAGCCGTCGTGTCTGG
CAACGGCAGGCGGGGGACGATCGCAAGGCTTGTTAACACACGATAGCCTA
CCACGTCGACACCCCCGGGTCTGACTTGCCTGTTGTATGAGCCATGACGT
CGGGGGTCCTGTGACCAGATGTGTCTCTCCGACCTCTCCCGTTCCAGCGT
CCTGCGCCTCTGAACAACTTTCTACCTCAACTTCTTGACATCCTACGTGA
ACGGCATCGAGCGTGTACGAAGTTCCACTCACCTTGTCATTTCTGGCTCA
CTGCCTCGTTACAGGCGAAGTAGCGAGGTGTCGTAGGCAATCGGGACATC
TCCTCTGCCTCGTTCTCAATTGTCGCAGTACTTGCTTCGGCAGTCAATCT
CTGGTGTGCCGGGCACGTGATCCTTGCCTGCCAACGGATACAAGTCAACC
TTTCGGCGCGCGCGGTCGCCACGCTGTCATTCCTAAAAGCGTGCATTACA
GCCGCACACCCCTGTCAGAAGGACTTGTCACGGGCAGCATAGCTTCGGGC
GCTCGGACTACCATCAGAACTCGTCAACCTCTGATGCCCGATATACTCAG
GGACTCCCAAGCCGGTACCTCCTCCATCGCCCCTGAAATCGTTCGGCCCG
CGCCCCATGGTGCCGGGATGCGTGTAAGAGAACCGCATCTGGTTCCTATT
CCTTCCAGAGGAGAGGCAAGAGTCAACGATCTTCACAGGCCGACAGCGCG
TTGTGGCGCGGTACCTCCTCCCCCCTCCCTCTCCCTCACCCTCGCCCTGG
ACGCCGTTCTGGTCCTGCCTCAATGGCCCCGCGTCCTTCCTCACGAAGGG
GCGGTGGATGTCTTCCCTCTGCCGCAAGCGGGCACAGCTCTGGTGGAGGG
AATGGAGGAAGGGTTGGAGGAGAAGGACGAGGAGGATATGCTGCTGCCTG
TGGGGCCCGCTCTTTTTCGGCGGACGTGTGCGGTCCTGGTCGCGAGGGAA
GAAGGGGGGGGAATGGAGGAGGACGGGGAATTAGAGGAGGGCCGCCAGCC
CTTGTCGCCGGTGCGTCGGGACTCAAACGGAAGTGGAGATCCCTCTTTTT
TCAAACTATCGGCCCCGGAGTTATCCTCGTCACATGGGCGAGCAGTGGCT
GGACCAGGCCCACAAGAGCAACAATGACAAGATCGAAATTAGAGGTGGAG
AAAGGGGTGGAAAAATCCGGGACGGGCGGCATGTATAAGTACACACACGT
CGTAACAAAGTGACAAAAAATGATGCGTGACCAATGAGGCGTTGA back to topCoding sequence (CDS) from alignment at CM002473.1:256539..258033- >rna7748 ID=rna7748|Name=rna7748|organism=Nannochloropsis gaditana|type=CDS|length=594bp|location=Sequence derived from alignment at CM002473.1:256539..258033- (Nannochloropsis gaditana)
ATGCCCGATATACTCAGGGACTCCCAAGCCGGTACCTCCTCCATCGCCCC
TGAAATCGTTCGGCCCGCGCCCCATGGTGCCGGGATGCGTGTAAGAGAAC
CGCATCTGGTTCCTATTCCTTCCAGAGGAGAGGCAAGAGTCAACGATCTT
CACAGGCCGACAGCGCGTTGTGGCGCGGTACCTCCTCCCCCCTCCCTCTC
CCTCACCCTCGCCCTGGACGCCGTTCTGGTCCTGCCTCAATGGCCCCGCG
TCCTTCCTCACGAAGGGGCGGTGGATGTCTTCCCTCTGCCGCAAGCGGGC
ACAGCTCTGGTGGAGGGAATGGAGGAAGGGTTGGAGGAGAAGGACGAGGA
GGATATGCTGCTGCCTGTGGGGCCCGCTCTTTTTCGGCGGACGTGTGCGG
TCCTGGTCGCGAGGGAAGAAGGGGGGGGAATGGAGGAGGACGGGGAATTA
GAGGAGGGCCGCCAGCCCTTGTCGCCGGTGCGTCGGGACTCAAACGGAAG
TGGAGATCCCTCTTTTTTCAAACTATCGGCCCCGGAGTTATCCTCGTCAC
ATGGGCGAGCAGTGGCTGGACCAGGCCCACAAGAGCAACAATGA back to top
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