rna7735, rna7735 (mRNA) Nannochloropsis gaditana

Overview
Namerna7735
Unique Namerna7735
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2598
Alignment locationCM002473.1:196769..198090 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100102g15.76.mrna
Orig protein idgnl|cribi|Naga_100102g15.76
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:196769..198090 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100102g15gene7489Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22965.1cds7714Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7735rna7735-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7735 ID=rna7735|Name=rna7735|organism=Nannochloropsis gaditana|type=mRNA|length=2598bp
AACAGGAGAACGGAAAAGGGCAGACATTAACTTTACTTTTTGAAAGAAAG
CAACTTTAACGGCGAAAGTCACGCCCTTGGCGAGGAAAACCGCAGCCAGT
GGAGCCCGAAGACAAACCGGCCGGGAGGGGGGATGAGGGAGGGGTTTGAT
GCAGTGTCTTTGATTATGTGGACATGGTAGACATTATTCAATGCGTATAT
CTTGTGGTCCTTCCACGTGAATGATAACTCACACTGCCTCCCTCATCATA
GTATCTTCCCCAGGTCGACGCAAGCTGGCAATCCTCCCAAGCCTTAGCCA
GGGGAATGGGGGAAGATAATTGCAGCGTCACGCCTGGAGATGCACGGGTC
CGGCTCCGTTTCTTCACGCGAGACCCTACTATTCGTGTCAGCGAAGCCCC
TCTGGCTGTACCTGTCTCTCTCAACAGGCGGGGGCTTTCCGAGGTCATCG
ACCATCTTCGCGGGAAGGCCGCAGAAAGTGAAATAACGCGAAATAAGAAG
ACACATAGAGGGTATGATTTCGTGATCGAAAACCAGCTCTTGCGGTGTCC
TCTGGAGAAGTTTCTGCGCGCCACCGGGATCTCCACGGAGTCGAGCGTGG
ATGTGGAGTATTTCCGAACGCTTCAGGCACCAGTGCAAGGTTCTTCTAGC
AAATCAGAGGCGGCGTGGGTGGGGTCGCTCGTGGCTTGTGAGGGGAATGG
GGGGGAGGACATGGTTTTAGCTGGGGCTTTCGATGGGAGTCTGCGATGTC
ACTCAGCGCGGGGCTGCGTCGAGCTCGGGGGGCGCTGGCTCCATGCTCAT
CGTGGACCGATCAAAGCGATGGCAGCGTTGGAGCCCGGAGCCCAGGAACA
AGAGTCTGGGGCATCAGAGAGAGGCGTCGTGACGGTGGGAAAGGACCAGG
TGGTCAAGGTGTGGCAGGTGCTGGTGGGAGGGAGGGGCGAGAGGAAGGGT
GGGAAGGAGGCAACGGTGCGTCCTGTGAGCACCCTGATCGGACACGAGAA
TAGCGTGGAGTGCGTGGCTGTGCGTGGGAAGGAACAGGTGCTGAGCGGCG
ACTGGGGGGGGGTGCTTTGCCTGTGGAAGATAGACAAAGAGGAGAGGACC
CCGGTTACCGCACCCTCCTTCACCAGCGTCCACAAAAGGAAGAAGCGTAA
AGTTGTCGAGGGAATGGATGACGAGGATGCATCACCGCCAATTCCCGGCA
TCCATGCGCCCGTGTCGCTCTTCAAGGCTCACGCGCAGTGCGTGAGCGGC
GTCAAATGGCACCCTAAGGAGTCCCTGGCCTTCACCTCCTCCTGGGACCA
CTCTGTCAAAATCTGGGACCTCGAGCACCAGAACTGCGTGCAGACGCTTA
ATGGGAGCAAGGTCGTCACCTCCTTTGCCATTTCATCAGGCAATCTTCTC
GGCGCAGGGCACCCCGACGGACGGCTGCGGATATGGGACGTGCGCTCCGT
GGAAGAGAAGCAGGGCATGACGCTAGCGGCCCCCGGAAAGCGGGTCATGG
CAAGCTGTGGCTCCTGGATCTCTGGCGTGGCATGGCACCCGCAGCGGGAC
AACGTGCTTGCAGCTATCTCTCACGACGGGTATCTTCGCGTCTGGGACCT
GCGGGCCACCAAGCCCCTTCACACCCTCCGCGCGCACGAGGATAAGGCTC
TTGCCCTTTGTTTTGGGCGGGCTCGTGATCAGTTGGGGATGTGGGCCATC
TTCACAGGGGGTACAGACGGGGTTGTTCGCCGATTCGAGACTTCGTAAAA
TGCAGCGTGACTCCTCAGACACCAGAAATTTTGCGTGTTATTCAAAAGTA
CTGCGGGATGATTATTAATCATTTTTGTGAATTCCCAACTTCGTTTTTGT
ACTTGTTTCCTTTCGCTTGGATGGCACGTTTTGGCCCGTAAGGTACGCAA
AGAGACTCGATGTGGTGATCCTTCGTCTTCACACGAACACCTCGGGCAGA
TATTTGAAAGGGGCAATATATTTAGACATGAAGAGGTGACCCTAGCGTAA
GCGACATGAAGAGACTGGTAATCTTGAGCCTCGCTGTAGAGCTAGCTGAT
TCCGGACGATGCTGAAGGTGGGCATCGGACGGACGGACGACTCGGCGACG
GGTGCCCGAGTCAAAGGCATGGCAAAGCATCAGCGTTAGTAAGAAATGAA
TTGTCTTGCTACGAGTGTGCCTTGTTTACCACCGATGACCTCCGAGGCAG
ACAAGTTCGTCCTCAAATGTTGATACTAGTTCAGTTTTTGGAACACACAT
TAAAGGAAGGACAAGAAGCAGCTCGTTGGGCCAATGTCTGCCCCTTGTGA
GCTACACAGCTGTGCAGTACGATGACACGGCTCGCAAAGCGACTGGGGGG
CACTGGAGGTGGAGCCTTGAAGTCGTTGCTCTACATCAGTGCGAGCACTT
CCTTACCCGCCATCGGACCTGCCGGAGCTTTAGGTAGGCAAAGCTCACTG
ATCTTCTCCTGCATGCTCTAAAGGCTCTCCCTGTCCCCCCTCAGAAAATC
ACGCTGCCAAAATAAATTGCAGGAGTACTGAACTTCATGCAATTGTTTTA
ATCTCCACAACGACGCATGAGTAAAAAGACGGGCAACCTTTTTTAATT
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protein sequence of rna7735

>rna7735-protein ID=rna7735-protein|Name=rna7735|organism=Nannochloropsis gaditana|type=polypeptide|length=179bp
MEGHTKFSISSRTHPSFVPPLSRPPVLRSGGRPATTRATRPFLPAPAHLH
CNVWSSILIAETTADFGPVNPIFEARLDVGALFSLVIMSLVVALFWARVI
TAITDREKRESLERIQREIRVKKLTGRFDGGDEETLRLAKEEQARPALGE
VGSFLRKFRLVNEGRRIKEDGGADDNSTE
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mRNA from alignment at CM002473.1:196769..198090-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7735 ID=rna7735|Name=rna7735|organism=Nannochloropsis gaditana|type=mRNA|length=1322bp|location=Sequence derived from alignment at CM002473.1:196769..198090- (Nannochloropsis gaditana)
TCTCAGCTGTTCCGGGCACGGGCACGGGAACGTCGGAGAGGTTGCGGTCT
CGCCGAAGAACGAGACGCCAATATGCCCGTGAAAGCTGACACAGAGGAAA
TCCACGACTGAAGATAGCCATTATTTCATCCCAACCGCCCACATGGTTAC
ATCGTTGCAGAGATTTTTAGGGAAGGACTAGTTCGTGCACAGATATTCTG
TACACAGCCAGCCCATCCTTGCAGCTCTCTCTCACCAAAGCGGATACTTG
CTGCTGAGGACTTGGAGGTGTCTCGGACTGAATTACCGCAAACGCACCGC
TGCCTTACCCCTTGATCGCACATAAGGGTCTATCTGCGTCTACAGCTCTC
ACTGTTGGAAAGCCATGGAAGGCCACACCAAGTTCTCTATTTCTTCACGC
ACGCATCCGTCCTTTGTGCCACCTCTCTCCCGTCCCCCAGTCCTTCGATC
AGGGGGCAGACCTGCCACAACACGCGCCACCCGGCCCTTCCTCCCGGCCC
CAGCACACTTGCATTGTAATGTCTGGAGTTCCATATTAATTGCCGAAACA
ACGGCTGATTTTGGACCCGTTAATCCGATTTTTGAGGCTCGTCTAGACGT
GGGAGCGCTCTTTTCCTTGGTAATCATGTCCTTGGTGGTTGCGCTATTTT
GGGCACGTGTCATCACGGCGATCACTGATAGGGAAAAGAGAGAGAGCCTG
GAAAGAATACAGCGAGAAATTCGAGTGAAAAAATTGACGGGGAGATTCGA
CGGCGGGGATGAGGAAACACTGCGCCTTGCCAAGGAAGAGCAGGCGAGGC
CGGCACTGGGCGAGGTCGGCTCTTTTTTAAGGAAGTTTCGGTTGGTCAAC
GAAGGACGGCGTATCAAGGAGGACGGAGGTGCTGATGACAATAGCACCGA
GTGAAGCGGAGGCTGGTAAACTCGGTGCAAAAGCATCATTTCACCTCCTG
ACACGTGGCCGTGTCAAGCAAAGGGTATCATGACAAGGCGCTCAAGAGGA
GTTACACGTAATTGGATGTTTGAGCTTCAGTGCACTGATCGATGAGGATG
AGGTGTTTTAATACTTTGTTTTGACGAAGAATACTGCGCGAACTTCAGTT
ATGAAAGATGATCGGAAAGGGTACCAAATAATTCGAGAAGAACACAACGA
TTTTGATCATTCTCCTTTAAGCACCCTGATGAAAAATCCTCCTTCTAGGA
ATAGGGGCAACTGGCTTATGCTTCGAGTCTGTATCATGCAAGGGCCTGGC
TAGGAAGCGCCAAGACGCAGCTCTTTATGCTGTTGCCCACAACTATGGCG
TGTTAAATTTTTATCTTACCTG
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Coding sequence (CDS) from alignment at CM002473.1:196769..198090-

>rna7735 ID=rna7735|Name=rna7735|organism=Nannochloropsis gaditana|type=CDS|length=540bp|location=Sequence derived from alignment at CM002473.1:196769..198090- (Nannochloropsis gaditana)
ATGGAAGGCCACACCAAGTTCTCTATTTCTTCACGCACGCATCCGTCCTT
TGTGCCACCTCTCTCCCGTCCCCCAGTCCTTCGATCAGGGGGCAGACCTG
CCACAACACGCGCCACCCGGCCCTTCCTCCCGGCCCCAGCACACTTGCAT
TGTAATGTCTGGAGTTCCATATTAATTGCCGAAACAACGGCTGATTTTGG
ACCCGTTAATCCGATTTTTGAGGCTCGTCTAGACGTGGGAGCGCTCTTTT
CCTTGGTAATCATGTCCTTGGTGGTTGCGCTATTTTGGGCACGTGTCATC
ACGGCGATCACTGATAGGGAAAAGAGAGAGAGCCTGGAAAGAATACAGCG
AGAAATTCGAGTGAAAAAATTGACGGGGAGATTCGACGGCGGGGATGAGG
AAACACTGCGCCTTGCCAAGGAAGAGCAGGCGAGGCCGGCACTGGGCGAG
GTCGGCTCTTTTTTAAGGAAGTTTCGGTTGGTCAACGAAGGACGGCGTAT
CAAGGAGGACGGAGGTGCTGATGACAATAGCACCGAGTGA
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Synonyms
Publications