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Properties
| Property Name | Value |
|---|
| Product | dynein light chain roadblock-type 1 |
| Orig transcript id | gnl|cribi|Naga_100035g35.3363.mrna |
| Orig protein id | gnl|cribi|Naga_100035g35.3363 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:381176..384596 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna772 ID=rna772|Name=rna772|organism=Nannochloropsis gaditana|type=mRNA|length=3201bp
AGAGACATATGATACGAAGCCTGACCCCATTTGCCTTGTGATACGATACT
TCACAATATGACAGTAATGAGCGTCAGCACTTAGTTCTTTAACGTGCGGC
AATGCGCCGCATGAAAAATGTGCTGATCTATCAAAGCACGAAGTGAACGC
ATTTGGTCTTACTGATCGCCATGACCTGGTAAACTGCCAGCTTTCATCAA
CGACATAAAGCTCGATTTTCAAGTCAAGTGGCTTGATGTACGTCAAAGAG
ACAGAGGCGCAGTTTCACAACACAAAAGCAGAACTTTCTGTACCATAGTC
TGCGGGCCTGCATGTACTTTCACGCTAGGGTAGGCAAAAAAAACAGAACC
TCAGTGCGCAGGGATAGCTGTGAGAGCGAGACCCGCGGCTGCATGCCATC
TGGATCTGACAAGCAGTATCCAAACGAGACAATTCCGAGAAGCAAGACCC
GCTACATCAGGGTCCCGTAAACTCAGGAAAATGTGGGGTATAGTGCAGTG
TCTTTCGAGCGGGTTCAACTTCATTGATGAACGTGAGTGAGTCTCCCTGG
GGACCAATACTCCGCCGTGCCATAATGTTAAGAGAACACTGACTGCTTCG
CAGAGCGGAAGCGATACAATACTTGAAAAAGGACAGCACGAAGGCAATGC
ATGACAAAGCGATTTTGTTCATGTCGCCACAAGAAATACACCACACGTGC
TTCCACTCGTCCCCACGCCAGGTCATTGGATAGCATGTCTTATCGCGCCG
TACGTGTTTTAAAGTAAGTGACCCATCACAGTGATTTATATGAAGCGTAA
TGTTGCGGAGCGTTTACAATGTAGTTCTGTGACCAGATGCTGTTGGCCTC
CGCATGTGTGCGTTGCCCACCTAGATTATTACGGTACCTTGCTTCTTTAT
GTGTTTCAGCATGTCATGTCACATCGTTCACTTCTACACCGAGATGATGA
ATTGCAACCTTTGGATTATTTTCATGCAAGCAGCTTCTGAAGCTCCTGCG
AAAAAGTAGTATCGGCGACCCATCCTTTTTTATAGGCTGCTAGTAACTAC
GTGGAAGGTAATGTAGTGGACGAAGATATTGTGGTGAGAGGATGATTGAT
TTTCCGTGAAGGCCCGCTGTGAGAGTCTACACTCTTCTCAAGAATCTCTG
AAACCATTTCTACCTACCTGTGTAACGTCCTTTTTCCGGGGGTGGCTCCC
GGTCGACGAAATCAATGTGGCAGATGCTACGGCGATGGCGTTCTTGCTGT
CGCGGGTACTATTGTTGCTCTCATTGTTCACCATGGCTGTCCTGCCACTG
AATTTCACACCTACTCGAGGCCCTGCCACTCCAATCGTTTTCCTCGCAGT
CGCTCTATGTGGCGCTATGCTCATCCTTCCACCTGTGCTGCCCGTGGCTT
CCAGCGTCTGTCCTGCTTCCTCTGACCTTTTCCCAAACGACTTTTTTCTC
GTGATGGCCTGCGGCTTCACATACAATTGCACACCGCGTTTGCTGCCGTG
CCCGTCTTTTATACCTTTCACCGAATTACCATAACGCACTTGGACGATTC
GTCTCAAAGGTTGAGGTTTCGCCGTTGGTTGATTACTTTTTATGAAATAG
GGATGAAATATTAGGGGTGGATCAGAGAGAAGCATTTTAACTATTGCTTC
GTCCATGACGTGACGTTTGCCCTCCGCTCAACAATTGGGACATCTTCAGA
CGATCGACAGCGTCAAAATATGCACGAGGCTGGCACAGACAATCCGTTCA
TTTTCACTTACTTCACTGCCATCACGATACGTTGGGTTCCGCTGGGTGCT
TTCATGAACTGCTTCCTCTTGGCATCCTTTGCAGCGCTGGCCTTCGGCGT
GTTCATACTAACCTGGCCCGTTCGAGAGGAATGCAGCTGAGCTGGTGCGT
TGGATAGGGCAACTCGAGCAAACAAGTGAAAGAAGAGTGATGGAAGCATC
GATTCAAAGTTACCCACGATCGTCATGAAGAGGGCTGCTTAACACTTTAT
TCAGTGCGCGAAAGATGAAGCATTCAATCGACTGATTTTCTAAAAAAAGA
TCCATTATTGGACTCCATTACATGTGTTTATGCCGACCTTACGTGTCATG
CCGGAGTTTTGAATTTATTTGCATCTTCTTGTCCCCGACTTTTGAACGAG
GAGGTCGCCCAACGCTCGAACAAAGCACGCAGTTCTGCTCCCCTGTATCG
CAACCGCTACACGAATCACCTACCAAGCGTGGCTTCAAACTTGCCAAGCG
TAGTGGGCAAGGGGCAAGGCCTCTTTTCGTGTTCACACAAGAAAACGCAG
GCCCTAAAGACATGGTCTCCCGCTAGTAACGGTTTTCCGAGTTTTCCTCA
CTTTCACGGCGCAATTACTAGGTGGATTAAAACATTAGCAGAACAAAGTT
TCATTCCAACATTCATCCAAATAGGTACTTATTCAAGGATAAACACCAAA
GGCCACAGTTTCATTATGGTAAGCCTTTTTCGTTTCATTTTCGAATATTA
CAAGCATAACTATGTAAAATTTCCATTCTGGAAGTCGCAGGTGGAGGACA
TCCTGGAGCGCATCAAGACGAAACCGAGTGTGGAAGGCTACCTAATTGCA
AATCAAACAGGCCAAGTTCTTCGCCGCTCACCAAAAATGAATGAGGACGA
AGCACATGGCATGGCGACCACTATGCGACCACTAGTCTTGAAAGCAGAAA
ATGTCGTGAGAGATCTAGATCCACAGAACGAGCTACAATTTCTGCGCATC
AAAACGAAGAATCGAGAAATTATTTCTACCATTAGTACGTTGAAGACTGT
CTTTTTCATCCTTGGACTTCGTTCATATTATGCACATACCAACCTTATAT
ATTGCAGGCGACGACTTTCTGGTGACCGTCCTACAGCGGTGGAGCCCGTC
TACCGCTTGACGGCTTAATTTCCAATTTTTCTAGAAAGCAAAAAGGCTTG
CAACGGCACTATGTATGCAAAGTTTGGGCAATTTTCGTTACTTGTTACTG
TTGTGTCTGAACGAACGTTACTTGTTACTGTTGTGTCTGAACGAACGTTA
CTTGTTACTGTTGCGTCGGAACGAAGCATCGGCATGCACTTTACTAACAT
TTTATTGCTTGTGACGGTCATGCACAAAAATAATGCGGGAAGTTAAAGTA
TGTCAAATAAAGAACTTTGGATAAAGCACTAAAAAAAACTAAAATACAAT
G back to topprotein sequence of rna772 >rna772-protein ID=rna772-protein|Name=rna772|organism=Nannochloropsis gaditana|type=polypeptide|length=150bp
MVSLFRFIFEYYKHNYVKFPFWKSQVEDILERIKTKPSVEGYLIANQTGQ
VLRRSPKMNEDEAHGMATTMRPLVLKAENVVRDLDPQNELQFLRIKTKNR
EIISTISTLKTVFFILGLRSYYAHTNLIYCRRRLSGDRPTAVEPVYRLTA back to topmRNA from alignment at CM002456.1:381176..384596+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna772 ID=rna772|Name=rna772|organism=Nannochloropsis gaditana|type=mRNA|length=3421bp|location=Sequence derived from alignment at CM002456.1:381176..384596+ (Nannochloropsis gaditana)
TACGATACTTCACAATATGACAGTAATGAGCGTCAGCACTTAGTTCTTTA
ACGTGCGGCAATGCGCCGCATGAAAAATGTGCTGATCTATCAAAGCACGA
AGTGAACGCATTTGGTCTTACTGATCGCCATGACCTGGTAAACTGCCAGC
TTTCATCAACGACATAAAGCTCGATTTTCAAGTCAAGTGGCTTGATGTAC
GTCAAAGAGACAGAGGCGCAGTTTCACAACACAAAAGCAGAACTTTCTGT
ACCATAGTCTGCGGGCCTGCATGTACTTTCACGCTAGGGTAGGCAAAAAA
AACAGAACCTCAGTGCGCAGGGATAGCTGTGAGAGCGAGACCCGCGGCTG
CATGCCATCTGGATCTGACAAGCAGTATCCAAACGAGACAATTCCGAGAA
GCAAGACCCGCTACATCAGGGTCCCGTAAACTCAGGAAAATGTGGGGTAT
AGTGCAGTGTCTTTCGAGCGGGTTCAACTTCATTGATGAACGTGAGTGAG
TCTCCCTGGGGACCAATACTCCGCCGTGCCATAATGTTAAGAGAACACTG
ACTGCTTCGCAGAGCGGAAGCGATACAATACTTGAAAAAGGACAGCACGA
AGGCAATGCATGACAAAGCGATTTTGTTCATGTCGCCACAAGAAATACAC
CACACGTGCTTCCACTCGTCCCCACGCCAGGTCATTGGATAGCATGTCTT
ATCGCGCCGTACGTGTTTTAAAGTAAGTGACCCATCACAGTGATTTATAT
GAAGCGTAATGTTGCGGAGCGTTTACAATGTAGTTCTGTGACCAGATGCT
GTTGGCCTCCGCATGTGTGCGTTGCCCACCTAGATTATTACGGTACCTTG
CTTCTTTATGTGTTTCAGCATGTCATGTCACATCGTTCACTTCTACACCG
AGATGATGAATTGCAACCTTTGGATTATTTTCATGCAAGCAGCTTCTGAA
GCTCCTGCGAAAAAGTAGTATCGGCGACCCATCCTTTTTTATAGGCTGCT
AGTAACTACGTGGAAGGTAATGTAGTGGACGAAGATATTGTGGTGAGAGG
ATGATTGATTTTCCGTGAAGGCCCGCTGTGAGAGTCTACACTCTTCTCAA
GAATCTCTGAAACCATTTCTACCTACCTGTGTAACGTCCTTTTTCCGGGG
GTGGCTCCCGGTCGACGAAATCAATGTGGCAGATGCTACGGCGATGGCGT
TCTTGCTGTCGCGGGTACTATTGTTGCTCTCATTGTTCACCATGGCTGTC
CTGCCACTGTAAGTGGTCAGACCGTCTCTCTTTGCATGATTTATGGGGTG
AAACTTCTTAACTTGCGTGTTGCTACTGTCGCTATTGTTGTCGAGCAGGA
ATTTCACACCTACTCGAGGCCCTGCCACTCCAATCGTTTTCCTCGCAGTC
GCTCTATGTGGCGCTATGCTCATCCTTCCACCTGTGCTGCCCGTGGCTTC
CAGCGTCTGTCCTGCTTCCTCTGACCTTTTCCCAAACGACTTTTTTCTCG
TGATGGCCTGCGGCTTCACATACAATTGCACACCGCGTTTGCTGCCGTGC
CCGTCTTTTATACCTTTCACCGAATTACCATAACGCACTTGGACGATTCG
TCTCAAAGGTTGAGGTTTCGCCGTTGGTTGATTACTTTTTATGAAATAGG
GATGAAATATTAGGGGTGGATCAGAGAGAAGCATTTTAACTATTGCTTCG
TCCATGACGTGACGTTTGCCCTCCGCTCAACAATTGGGACATCTTCAGAC
GATCGACAGCGTCAAAATATGCACGAGGCTGGCACAGACAATCCGTTCAT
TTTCACTTACTTCACTGCCATCACGATACGTTGGGTTCCGCTGGGTGCTT
TCATGAACTGCTTCCTCTTGGCATCCTTTGCAGCGCTGGCCTTCGGCGTG
TTCATACTAACCTGGCCCGTTCGAGAGGAATGCAGCTGAGCTGGTGCGTT
GGATAGGGCAACTCGAGCAAACAAGTGAAAGAAGAGTGATGGAAGCATCG
ATTCAAAGTTACCCACGATCGTCATGAAGAGGGCTGCTTAACACTTTATT
CAGTGCGCGAAAGATGAAGCATTCAATCGACTGATTTTCTAAAAAAAGAT
CCATTATTGGACTCCATTACATGTGTTTATGCCGACCTTACGTGTCATGC
CGGAGTTTTGAATTTATTTGCATCTTCTTGTCCCCGACTTTTGAACGAGG
AGGTCGCCCAACGCTCGAACAAAGCACGCAGTTCTGCTCCCCTGTATCGC
AACCGCTACACGAATCACCTACCAAGCGTGGCTTCAAACTTGCCAAGCGT
AGTGGGCAAGGGGCAAGGCCTCTTTTCGTGTTCACACAAGAAAACGCAGG
CCCTAAAGACATGGTCTCCCGCTAGTAACGGTTTTCCGAGTTTTCCTCAC
TTTCACGGCGCAATTACTAGGTGGATTAAAACATTAGCAGAACAAAGTTT
CATTCCAACATTCATCCAAATAGGTACTTATTCAAGGATAAACACCAAAG
GCCACAGTTTCATTATGGTAAGCCTTTTTCGTTTCATTTTCGAATATTAC
AAGCATAACTATGTAAAATTTCCATTCTGGAAGTCgcaggtggaggacat
cCTGGAGCGCATCAAGACGAAACCGAGTGTGGAAGGGTGAGTTTTGTATG
TTTATCATATTTTAACAAGGTGGAATATCTTACAGAGCCCCGCACAATCT
TGCCAGCTACCTAATTGCAAATCAAACAGGCCAAGTTCTTCGCCGCTCAC
CAAAAATGAATGAGGACGAAGCACATGGCATGGCGACCACTATGCGACCA
CTAGTCTTGAAAGCAGAAAATGTCGTGAGAGATCTAGATCCACAGGTAAG
ACTCCCTAACTCTTCACCAAAAAGGGGCCAGAGATTTCCCTCCTTTAAGA
TTTCTtccgcccttctctttcctttcttcacaATCTACATCGCTAGAACG
AGCTACAATTTCTGCGCATCAAAACGAAGAATCGAGAAATTATTTCTACC
ATTAGTACGTTGAAGACTGTCTTTTTCATCCTTGGACTTCGTTCATATTA
TGCACATACCAACCTTATATATTGCAGGCGACGACTTTCTGGTGACCGTC
CTACAGCGGTGGAGCCCGTCTACCGCTTGACGGCTTAATTTCCAATTTTT
CTAGAAAGCAAAAAGGCTTGCAACGGCACTATGTATGCAAAGTTTGGGCA
ATTTTCGTTACTTGTTACTGTTGTGTCTGAACGAACGTTACTTGTTACTG
TTGTGTCTGAACGAACGTTACTTGTTACTGTTGCGTCGGAACGAAGCATC
GGCATGCACTTTACTAACATTTTATTGCTTGTGACGGTCATGCACAAAAA
TAATGCGGGAAGTTAAAGTATGTCAAATAAAGAACTTTGGATAAAGCACT
AAAAAAAACTAAAATACAATG back to topCoding sequence (CDS) from alignment at CM002456.1:381176..384596+ >rna772 ID=rna772|Name=rna772|organism=Nannochloropsis gaditana|type=CDS|length=1359bp|location=Sequence derived from alignment at CM002456.1:381176..384596+ (Nannochloropsis gaditana)
ATGGTAAGCCTTTTTCGTTTCATTTTCGAATATTACAAGCATAACTATGT
AAAATTTCCATTCTGGAAGTCgcaggtggaggacatcCTGGAGCGCATCA
AGACGAAACCGAGTGTGGAAGGCTACCTAATTGCAAATCAAACAGGCCAA
GTTCTTCGCCGCTCACCAAAAATGAATGAGGACGAAGCACATGGCATGGC
GACCACTATGCGACCACTAGTCTTGAAAGCAGAAAATGTCGTGAGAGATC
TAGATCCACAGAACGAGCTACAATTTCTGCGCATCAAAACGAAGAATCGA
GAAATTATTTCTACCATTAGTACGTTGAAGACTGTCTTTTTCATCCTTGG
ACTTCGTTCATATTATGCACATACCAACCTTATATATTGCAGGCGACGAC
TTTCTGGTGACCGTCCTACAGCGGTGGAGCCCGTCTACCGCTTGACGGCT
TAAATGGTAAGCCTTTTTCGTTTCATTTTCGAATATTACAAGCATAACTA
TGTAAAATTTCCATTCTGGAAGTCgcaggtggaggacatcCTGGAGCGCA
TCAAGACGAAACCGAGTGTGGAAGGCTACCTAATTGCAAATCAAACAGGC
CAAGTTCTTCGCCGCTCACCAAAAATGAATGAGGACGAAGCACATGGCAT
GGCGACCACTATGCGACCACTAGTCTTGAAAGCAGAAAATGTCGTGAGAG
ATCTAGATCCACAGAACGAGCTACAATTTCTGCGCATCAAAACGAAGAAT
CGAGAAATTATTTCTACCATTAGTACGTTGAAGACTGTCTTTTTCATCCT
TGGACTTCGTTCATATTATGCACATACCAACCTTATATATTGCAGGCGAC
GACTTTCTGGTGACCGTCCTACAGCGGTGGAGCCCGTCTACCGCTTGACG
GCTTAAATGGTAAGCCTTTTTCGTTTCATTTTCGAATATTACAAGCATAA
CTATGTAAAATTTCCATTCTGGAAGTCgcaggtggaggacatcCTGGAGC
GCATCAAGACGAAACCGAGTGTGGAAGGCTACCTAATTGCAAATCAAACA
GGCCAAGTTCTTCGCCGCTCACCAAAAATGAATGAGGACGAAGCACATGG
CATGGCGACCACTATGCGACCACTAGTCTTGAAAGCAGAAAATGTCGTGA
GAGATCTAGATCCACAGAACGAGCTACAATTTCTGCGCATCAAAACGAAG
AATCGAGAAATTATTTCTACCATTAGTACGTTGAAGACTGTCTTTTTCAT
CCTTGGACTTCGTTCATATTATGCACATACCAACCTTATATATTGCAGGC
GACGACTTTCTGGTGACCGTCCTACAGCGGTGGAGCCCGTCTACCGCTTG
ACGGCTTAA back to top
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