rna7719, rna7719 (mRNA) Nannochloropsis gaditana

Overview
Namerna7719
Unique Namerna7719
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1491
Alignment locationCM002473.1:165396..166917 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100586g2.86.mrna
Orig protein idgnl|cribi|Naga_100586g2.86
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:165396..166917 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100586g2gene7473Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22976.1cds7698Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7719rna7719-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7719 ID=rna7719|Name=rna7719|organism=Nannochloropsis gaditana|type=mRNA|length=1491bp
AGCCCCCGAATCTGCTTCTACATGCACAGGTGTCTCACGTGAGGAAACAC
CCTCGGCTCACCTTGTGGTCGGACTCATGGCCTCCAAGGCAGCCCCTCCC
TCCGGGTCAACCTCCTCCCCCTTCACCATCGCAGATGCTGCTAGGGCGGC
TTGGTCTTGCGTCTCGGACGTCTTTTCCCCTTCGCCTCCGCCTCCGTCGA
AGGATGACACCGCGGATATCACGGTGGTCATGACCCTTATCCTGCTCGGA
CAACTCGCTGTACTCTCGGTTGTCTTCGTCTTCCTGACCCCTGCCAAAGG
CGGAGGCCGCTGGCTCCCCCCCGCCGACACAGACAAAGGCGCATACGAGC
GTTTCGTGCTAGCGTACTCTCCCGTCTGGATGGGCGTGTTCGCCGTCATC
ATCGCGGGCCAACTGTACGAAACCTTCACTGCTCACACCTACATGCTTGT
TTGCACTACCCTCTGCCTCCCCCTCTTTTTCTACCCCTTCCTCGCCCCCG
CCCTTCCTTCCCACGCCCCCCCCCCCAAAGAGGCCTCCGAGGGGGACAAT
ACTTCCCTTCCGTCCTCCTCGACCGTTCCGTCCCTGCTGCAGGGCTACCC
CCTCAAGGCAACGGCCTGGCTAGCCATCTACTCGCACATCGGGAACTACT
GGTACACGCACTACTTCTACACCGTCCTTGGCGCCTCCTACAGCATGCCC
TCCCTCCGCCTCAACGACGTACCTCTGCCCCTCTACTTCGCCACCTTCTT
CTACTTCTCCACCTACCACGCTTTATCCAACCTCCTCCTCCGCCGCGTCA
CCTCCGGCTACCAACGGACTCCCGCCCGCGGTATCTTCCTCCTCCTCCTC
CTCCTCGCCCTCAGCTACTGCACCGCCTTCATGGAGACGCTCACCATCAG
CGCCTTCCCCTACTACTCCTTCCAGGATCCCTTTATGGCCTTCACCGTCG
GCAGCGCCTTCTACGGCCTCTACTTCCTCGTGAGTTTTCCCGCCTTTTTC
CGCCTGGACGAGTTTAAGGAGGGGAGGTTGAGCCTCTACCAGAGCGCGAT
GGATGCTTTGGGGGCGGGAATGCTCATCCTCATCCTGCTCGACGCGGTCC
GGCTCTGGCTGGGCATGCCTCTAACCATGGCCGGGCAGGCCCTCCGTTAC
TGAAACCTTTCTCCCGAGGGTACCGCGTGTAACGGTTATTTAAACATTCG
AAGGAGGCCGGGTGATGTTGTGGTGCAGTGAGGGACGCCGGAGAGGGGGA
TGTCTGGGTGCTGCGGACCAGGAGGGGCTCGGGGGGGAGGAGGGGAGGAA
GCAAAGCAACAGCCTTTTTGGAGGCGGGTTCGGCAGGGTACTTGCGTCGA
GAAATTTTATGTCTGGCAGGCGCCTCCTGTCGCTTCGCTCTTCTCCCCGT
TTCTCAGTAGCCTCGCGCCTGACTAAACTCAGTCCTTTTACCTCTTTACA
GCATTCTCCCTCCTCACTCTCCCCTTCCCTCCTCACTCTCC
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protein sequence of rna7719

>rna7719-protein ID=rna7719-protein|Name=rna7719|organism=Nannochloropsis gaditana|type=polypeptide|length=178bp
MCAERQDEGGFRGRGEVVDGRGRTDPVSLLPTHLGRCEALRRHITRKFGD
SRRMGGGENVRRPRIRGGNGAKGIVDASSQAGEAVQHSARGRMCSVRKAA
LIPLPVWQIEGIMTRVPVSGIRHCISFHVQASGNGATSPQDSARNLGKRA
PAPRAAYKIACRRSWAMRPMLTATSRRG
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mRNA from alignment at CM002473.1:165396..166917-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7719 ID=rna7719|Name=rna7719|organism=Nannochloropsis gaditana|type=mRNA|length=1522bp|location=Sequence derived from alignment at CM002473.1:165396..166917- (Nannochloropsis gaditana)
GGGGAAGGGAAGGAAAAGCCGAAAATCGGCAGAAGAGAGAAGAAGAGAGA
AATGAATGGAAGCCCCAACCACGGAGCGTAATGCGTCTGCTGAATAGTGT
CCGGAAAGTGTTGAAACGGCAGGCGGTAGCATGGCATGGAGGGCTCGCTT
GGGCATCTCCTCCTACCTTGTAGCAGGGCGTGCGAAGAATGCCGTTACGG
ATGCGGAACATAGCCGTGGACACGTCCTCGAAGGTGACGGGCGGGACATC
GTCGAAATGCGGCGTGGAGGACTGAAAGATGTGCGCGGAGCGGCAAGATG
AGGGAGGGTTCAGGGGGAGGGGTGAGGTCGTAGATGGTCGGGGTCGGACA
GATCCTGTCTCCCTTCTTCCCACGCACCTCGGCCGATGCGAAGCCTTGCG
CCGGCACATTACCAGAAAGTTTGGAGACAGCCGCAGGATGGGTGGTGGAG
AGAACGTAAGAAGGCCGCGCATTCGTGGCGGAAACGGTGCAAAGGGCATT
GTGGACGCCTCGTCCCAGGCGGGGGAAGCGGTTCAGCATTCTGCCCGAGG
TCGTATGTGTTCCGTGAGAAAGGCGGCTCTGATCCCACTCCCTGTCTGGC
AAATTGAAGGGATAATGACACGGGTGCCAGTGTCGGGCATCAGACATTGC
ATCTCCTTCCACGTGCAGGCGTCCGGAAATGGTGCTACAAGCCCTCAGGA
CTCGGCAAGAAATCTAGGAAAACGTGCACCTGCACCGAGGGCGGCATACA
AGATCGCGTGTCGCAGGTCGTGGGCGATGCGGCCCATGCTCACAGCGACT
TCACGGCGGGGTTAAAGGGAAGCACACGCGTGACACGCACCCGGTGAGAC
GCTGGCAGGTGTGGTTTACCAATAGCTGCACTTGTTTTTATATTTTTACA
AGGTTTTCACTCAGCGGCTTCCCGCGTCACAGTCCGAAACAGCCAACTTC
TCACTCTTCCCCCCCTTCCGTCTCCGGTCGAGGCCCCTCCGCACTCGCCT
TATCCCTTCTTTGAAAATCTCTTTCCATTCCTCCTTCTAAGAAGATCGTG
TTGGACACTACCGTTTCTAAACGCGCCCACAAATGCATGGCATTCTCCAG
GGACGCCCTGGCATCTAAATTACAGAGTTCCTGCTCCATGGGGCTGCGGG
GAAGTACGCCCTCGGGTCGATCGCGGTCTTGGCGGGGGGATGGAAATGAG
GAGGGGGAGTAGGAAAGAGATGAAGGGGCAGAGGCCGGGGCCGAAGCGAC
GCTTATCCTGCCACGCCCAGTCTCCTCCTTGTTAGCCCAGCCTGAGGCAG
CTCCAGCATTTTCGCCACAGTCGGCGGCCGCGCTTGTCGGCAGGTGAGCC
GCGGGACAAGACGCAGTCGTGGATGCAGGTGACGGGCTTCGGGCCAAGGC
TTCAAGCCGACGGATCTCCCCCTGCACAGCCTCGAGCAGGCGTCGGTGTG
GTCGGCCCAGGAGCATGAAGCTCTCTTCCTCAAGGAGCAGGCGGTCACGG
AGGAGGCACCGGGCCAGGCGCC
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Coding sequence (CDS) from alignment at CM002473.1:165396..166917-

>rna7719 ID=rna7719|Name=rna7719|organism=Nannochloropsis gaditana|type=CDS|length=537bp|location=Sequence derived from alignment at CM002473.1:165396..166917- (Nannochloropsis gaditana)
ATGTGCGCGGAGCGGCAAGATGAGGGAGGGTTCAGGGGGAGGGGTGAGGT
CGTAGATGGTCGGGGTCGGACAGATCCTGTCTCCCTTCTTCCCACGCACC
TCGGCCGATGCGAAGCCTTGCGCCGGCACATTACCAGAAAGTTTGGAGAC
AGCCGCAGGATGGGTGGTGGAGAGAACGTAAGAAGGCCGCGCATTCGTGG
CGGAAACGGTGCAAAGGGCATTGTGGACGCCTCGTCCCAGGCGGGGGAAG
CGGTTCAGCATTCTGCCCGAGGTCGTATGTGTTCCGTGAGAAAGGCGGCT
CTGATCCCACTCCCTGTCTGGCAAATTGAAGGGATAATGACACGGGTGCC
AGTGTCGGGCATCAGACATTGCATCTCCTTCCACGTGCAGGCGTCCGGAA
ATGGTGCTACAAGCCCTCAGGACTCGGCAAGAAATCTAGGAAAACGTGCA
CCTGCACCGAGGGCGGCATACAAGATCGCGTGTCGCAGGTCGTGGGCGAT
GCGGCCCATGCTCACAGCGACTTCACGGCGGGGTTAA
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Synonyms
Publications