rna7717, rna7717 (mRNA) Nannochloropsis gaditana

Overview
Namerna7717
Unique Namerna7717
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1042
Alignment locationCM002473.1:159936..161184 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100586g4.84.mrna
Orig protein idgnl|cribi|Naga_100586g4.84
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:159936..161184 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100586g4gene7471Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22974.1cds7696Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7717rna7717-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7717 ID=rna7717|Name=rna7717|organism=Nannochloropsis gaditana|type=mRNA|length=1042bp
AGAGCGTGATGCTGGGGTCATAAAATGCCGTGTGAGTCCTTGAAGATGAG
GCGTTGCACCTTCACTGATTGCCTTTACAGATTCGAGCACATCGTGCATG
ATCCGAAGGCACTCATGCGCGGACGCGTTGTTGTGAGCAATGCCCTTGAA
AGCAGATTTTGGTCGACGCGACGGGCTTGTGGTGGGGTTCTGCCTCGGAG
GCCCAAGCCCCGGTGCTGGTAGGGGGGACGCGTTGACTCCTTCTTCTGTC
CAAGGAGACGGTGGCAGGTTGCTCGCGGGCAAGCACTCTTTCTGGAAAGA
ATGGCTACTCTTGCATGGGGCATGTCGACTGGGAGACAGGCAAACGGAAG
TCCTGGCGCCAGACTCGTGGTAATCCAGAGAGACCTTTCCCTCCTCACTC
CCATTCTTCCCTAGATCACGCAGCGCCGCAGCAGGAGAGGACAGGGGCGC
ATGAGGAGAGGACTGCGGGTACCAAGGGGATAAGGAGAGCGTGAAAAGCC
TGAGAGCATGCAGCGGGGTCGCTCGGGCTCGTTGGACTTGTTTGCGGAGA
ATAGCCACCTTTCCCCGGGCCGTGGGGGCGGAGGGGGTTCGCCCCTGTCG
CATGGAGGCCGTTCGGACGGGGGAGGCAGTCGAGGAGGGGGTGGGGGAGG
CGTGGAAGGAGGGGGGATGGGGGCATTGGAGGATGAATCGACGCGGCAGA
AAGTGTTGCACGCAGAGCGGATGCGCATCGCCCTGGCAAACATGAGTGAG
GGACAACGCGAACGCTTCGAATTTTTCCGACGTTCACATTTTCACCGCGA
GACGATGAAAAGGTTGATGTTGGAGAGCTTCGCGCGCGTACGTGCTCTGG
AGGGGGGCGGGGAGGGCGGGCCCCGGCGAGGGCGGGGGGAGGGGAGGGGC
AGGAGGTGGGCGTGGAGATGAACGAGCAGATGGTGATAGTGGCGAGCGCC
TTGTGCAAGCTCTTTGTGGGGGACTTGGTGCACGGGGCCCGGCAGGTGAT
GGAGGAGAGGGGGGGAGGAAGGGGCGATACCTCCGGGTAGGT
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protein sequence of rna7717

>rna7717-protein ID=rna7717-protein|Name=rna7717|organism=Nannochloropsis gaditana|type=polypeptide|length=313bp
MLAAALVISLSVLQLSALPLGASPRALFLAEFPRTSVHSLANSHKKKACG
TASMPFSASNPSPPPSAHDQGPPTPLADSPTLRGPSFLNPVAADYAILMG
KALSLDKAWLFPPPPSPVADQGAGSTSKALPPRLAHVVIKRSLPDVDNDR
ERTFLHHFDLLLPPLHSSDHQHGRQASCPASSGPSPPPSPQWLPPAGSPQ
EVTGASVLSYSPSGRFLVIFKEEKEGAEEAYAEVWGRTGVLRRIRLGGVH
GKVVGGGVLGGTAWSQDEEVLAYVARVRVQGPGRATSAFEAAGAGRGKEG
EGPAGGVVGFGVP
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mRNA from alignment at CM002473.1:159936..161184-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7717 ID=rna7717|Name=rna7717|organism=Nannochloropsis gaditana|type=mRNA|length=1249bp|location=Sequence derived from alignment at CM002473.1:159936..161184- (Nannochloropsis gaditana)
GGAGGGGCTGCCTTGGAGGCCATGAGTCCGACCACAAGGTGAGCCGAGGG
TGTTTCCTCACGTGAGACACCTGTGCATGTAGAAGCAGATTCGGGGGCTG
CGTTGTATGAGGCACGGCGCGCGCGTCACGCATTCTTGGGACGGGAGGTT
GCCAGGTCTATGTCGTGTCTCTCAGCGAGCGTCCACTGCCAGACCTTCCC
AGACATTCACAAGCCTCTCATGCCTGCGTTCGCATCCTTCACACAGCATT
GACGGCCTCTTCCCATCGGTTGGGTCGTTTTGTTGTGGCGCTCGAAACTT
GCCACTTTTTCATGTTAGCTGCTGCGCTGGTCATCTCCCTCAGCGTGCTT
CAACTTTCAGCCCTACCACTGGGAGCTTCCCCTCGGGCGCTTTTTCTGGC
CGAATTTCCCCGCACTTCTGTGCATTCCCTCGCAAATTCTCACAAAAAAA
AGGCCTGTGGAACTGCTTCGATGCCCTTTTCTGCTTCAAACCCTTCTCCT
CCGCCTTCAGCTCACGATCAGGGCCCCCCTACCCCCCTCGCGGACTCGCC
CACCCTACGCGGCCCCTCCTTCCTGAACCCCGTGGCCGCAGACTACGCCA
TTTTAATGGGTAAGGCCCTCTCCCTCGACAAGGCATGGCTATTTCCGCCC
CCCCCCTCTCCTGTGGCCGACCAGGGGGCAGGCAGCACGTCGAAGGCCCT
CCCCCCCCGCCTGGCCCATGTCGTCATCAAACGCAGTCTCCCGGACGTGG
ACAACGACCGAGAGCGGACCTTCCTGCACCACTTCGACCTCCTCCTGCCC
CCTCTTCACTCCTCTGACCACCAGCACGGACGCCAGGCCTCCTGTCCTGC
CTCCTCCGGCCCCTCCCCCCCGCCCTCACCTCAGTGGCTGCCGCCCGCGG
GCTCCCCGCAGGAGGTGACGGGGGCATCGGTCCTTTCCTACAGCCCCAGC
GGCCGGTTCCTGGTCATCTTCAAGGAGGAGAAGGAGGGAGCGGAGGAGGC
CTACGCGGAGGTGTGGGGTCGGACGGGCGTGCTGCGGAGAATTCGCTTGG
GCGGGGTGCACGGGAAGGTGGTTGGGGGGGGGGTCCTGGGGGGCACGGCC
TGGAGCCAGGATGAGGAGGTGCTGGCCTACGTGGCGCGGGTGAGGGTTCA
GGGCCCGGGGCGGGCGACGTCGGCATTCGAGGCGGCGGGGGCGGGGAGGG
GGAAGGAAGGCGAGGGGCCGGCGGGGGGCGTCGTGGGCTTCGGAGTACC
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Coding sequence (CDS) from alignment at CM002473.1:159936..161184-

>rna7717 ID=rna7717|Name=rna7717|organism=Nannochloropsis gaditana|type=CDS|length=938bp|location=Sequence derived from alignment at CM002473.1:159936..161184- (Nannochloropsis gaditana)
ATGTTAGCTGCTGCGCTGGTCATCTCCCTCAGCGTGCTTCAACTTTCAGC
CCTACCACTGGGAGCTTCCCCTCGGGCGCTTTTTCTGGCCGAATTTCCCC
GCACTTCTGTGCATTCCCTCGCAAATTCTCACAAAAAAAAGGCCTGTGGA
ACTGCTTCGATGCCCTTTTCTGCTTCAAACCCTTCTCCTCCGCCTTCAGC
TCACGATCAGGGCCCCCCTACCCCCCTCGCGGACTCGCCCACCCTACGCG
GCCCCTCCTTCCTGAACCCCGTGGCCGCAGACTACGCCATTTTAATGGGT
AAGGCCCTCTCCCTCGACAAGGCATGGCTATTTCCGCCCCCCCCCTCTCC
TGTGGCCGACCAGGGGGCAGGCAGCACGTCGAAGGCCCTCCCCCCCCGCC
TGGCCCATGTCGTCATCAAACGCAGTCTCCCGGACGTGGACAACGACCGA
GAGCGGACCTTCCTGCACCACTTCGACCTCCTCCTGCCCCCTCTTCACTC
CTCTGACCACCAGCACGGACGCCAGGCCTCCTGTCCTGCCTCCTCCGGCC
CCTCCCCCCCGCCCTCACCTCAGTGGCTGCCGCCCGCGGGCTCCCCGCAG
GAGGTGACGGGGGCATCGGTCCTTTCCTACAGCCCCAGCGGCCGGTTCCT
GGTCATCTTCAAGGAGGAGAAGGAGGGAGCGGAGGAGGCCTACGCGGAGG
TGTGGGGTCGGACGGGCGTGCTGCGGAGAATTCGCTTGGGCGGGGTGCAC
GGGAAGGTGGTTGGGGGGGGGGTCCTGGGGGGCACGGCCTGGAGCCAGGA
TGAGGAGGTGCTGGCCTACGTGGCGCGGGTGAGGGTTCAGGGCCCGGGGC
GGGCGACGTCGGCATTCGAGGCGGCGGGGGCGGGGAGGGGGAAGGAAGGC
GAGGGGCCGGCGGGGGGCGTCGTGGGCTTCGGAGTACC
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Synonyms
Publications