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Properties
| Property Name | Value |
|---|
| Product | dynein light chain roadblock-type 1 |
| Orig transcript id | gnl|cribi|Naga_100035g35.3364.mrna |
| Orig protein id | gnl|cribi|Naga_100035g35.3364 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:381135..384596 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna771 ID=rna771|Name=rna771|organism=Nannochloropsis gaditana|type=mRNA|length=2736bp
GACCAAATGCGTTCACTTCGTGCTTTGATAGATCAGCACATTTTTCATGC
GGCGCATTGCCGCACGTTAAAGAACTAAGTGCTGACGCTCATTACTGTCA
TATTGTGAAGTATCGTATCACAAGGCAAATGGGGTCAGGCTTCGTATCAT
ATGTCTCTGAAGAGTCATTCTCACTCCTAACAACGCGACGTGTTTTTCCC
TCCTGGCTCTTGACACGACCCTGCAGGCACAATTCATTACCAGAAAGAAG
GAGTTTCCTTCCCTTTTCTTCACGGATTTTTTGTTTGTGGTGTCGTTCAA
GTGCCGTAAACCAGAGATGTCGAGCGTGAAAGTGGAGGCCCCGGAGACCT
CCTATGACGGGTACCGCGAGAGTTACCATCCTCCTCAAGATATCGACTGT
CACCGACACAAGAACACCAGCCTCGACAAGATGGACGACAAGGAGAGCAG
TGCCAAGCGTATCAATGGGTTGGGATCAGAAGTCATGGAATACGGAATCC
AAGTAGTGAAAGGGAAGGATGAGGGAAGCAGGGGGGTCTCCACCTCGGCA
GCCTCAGCGACCCCAGTGCCTAGTGCCAGCGCTACTGCCGCAACTCAGCT
CTCGGATGCGACAAGTGCAAACAGTACCGACTCAAATATCGTCAGCAGAA
GGAAGCAGGAGCCGGCCGGAACGACGCCGGCACAGGCCAGAGGAAACAAC
AAACGCAACCTGCCTTCTGTCTCATCTGCCGGGGGGGTTGCCAGAGAAAA
TGGAGGCAAGCGTTCTCGACGACCGCCGCCAAGATTTGGGGAGACCGCTG
GATTGGATAGGCGGGAAGAGTCCATTTTGCGACAGGCCATTGAGAACTCC
AAAATAGAGACGCATTTGTGCGATACTGTCGAGATTGGGGAGGTGCCGGT
CTTCCGGCCTTCTCTCGCGGAATTTGCAGACCCCATCCAGTTCATTGAGA
GTGTCAAGCAGGCGGGCGATCATTTCGGCATCGTCAAGATCATTCCTCCG
CCCGGATGGTCACCCCCACCTCAAGACGAGATGCATCGCTCCTGCAAGAC
CCCCGTCAAAACCCGGCTGCAGAGTCTCAAATACTTCAAGGAGGGCACCG
GCGTAGCGGATGGGAAGGACTACACTTTTGCGGAGTACGAGAACATGGCC
GTGCAATTCAGTGAGAAATGGCAAAAAGAAAGGTACCAGGGTCAGGGCAA
AGATGCGCCCACCCACGAGGATCTCGAGAGGGATTACTGGCGCATCATCG
AGGCGGCCGAGGAGGTTGTGGATGTGGAGTACGGAAACGACCTGGACACT
CTCACCTACGGCAGTGGGTTCCCACGGGCCACGGATCTGATGATGCCGAG
GTCGGAGGGCAGTACAGAGGATCGCTTCGCAATTGAGACGATCGGGAAGG
ATCGGGAAGGGAGGGGACGACTGTTGGGTACCCCCGAGTACTACGAGCGG
TGCGGATGGAACATGAACAATCTGCCTCTTTGGCCCGGCTCCGTCTTGAG
GTACATCCGAGCCCCCCTGAAAGGCGTCAACGTGCCCTGGCTCTATTTGG
GCATGCAATTTGCTACCTTCTGCTGGCACAACGAGGACAATTTTATGTTT
TCGATCAACTACCTCCACCGAGGGGCTGCCAAGCAATGGTATTCGATCCC
AGGCTCCAAGGCCGACGTGATGGAGAAGGTCATGAAGGGCTTCTTGCGGG
AAGTGTTCGCCAACAACCCCGACCTTTTGCACCACATGACCAATCAGTTC
CATCCTGTCCTCTTTCACCGCGCGGGCGTTCCCGTATTCAAGGCAAGGCA
AGAGCCAGGGGAATTCATCGTCACTTTTCCCAAGTCCTTTCACGCGGGAT
TCAACTACGGATTTAATGTTGCGGAAGCTGTGAATTTCTCTCCTCCTCTC
TGGTTGCCTTTGGGACGGGAGGCGATGGAGCGATATCGTCGGTTTGCACG
CGAATCCGTCGTCTCCCACGACCGACTGGTCTTGACCTTGGCGCACAATT
TGTGCCCTGAGTGGTCGATTCCGTCCCTCCAAGCCTTGCTGCACGATCTG
ACGCTGATTGTCAAAGAGGAAGAGTTTTGGAGGAGCCAATTGACGCGGCA
AGGGTTGCGAGTCGACATCGTCCCGCCATCCAAGCTGCTGCCCAACAATT
TGAAGGAAATGGACGATGCCTCTCTCGACTATGACGAGAAGCGGGTCTGT
TTAAGCTGTAAGCATGTGTGCTTCCTGTCGGCTGTGGCATGCGAATGCAG
TGAATCTAAAGTGGTATGTCTGAGGGAAGTGCCTTTGCTCTGTAAGTGCC
GTATGGATCAGAGATATTTGATGGCCTGGCACAGCATAAGTGACCTCTGG
GACATGGTCAGACGCGTGGAGGAGTATTTGAAAGCCAGATTGGGGGAGAT
GGGGAAAAGGGATGGTCAAAAGGAGGAGGAGGAGGGAGGCGGTTCGACGA
CAAGCGATGGAGAGGAGTCAGGGGAAACGCTGTGACGAGAGAAAGCGCGG
GAAATGGGGCATGTACATCGTCAGGTTATGAGGAAACAGCGTGCATATTC
TATGGCGTGATTTTTATTTGTCTTCTCTCCATTTGGGGTACAGGTGAGAG
TATATAGCCTTTTTCACCCCGATCCTGTACTGTTTGGAGTTCGTGTTCTA
ACGGATAAAGGCTTCAAGATAAAGATGAAATGACTGAAAAAATAACCTTC
GCGAAGAATTGCATGACATAAATAGTAGCACGTCCT back to topprotein sequence of rna771 >rna771-protein ID=rna771-protein|Name=rna771|organism=Nannochloropsis gaditana|type=polypeptide|length=150bp
MVSLFRFIFEYYKHNYVKFPFWKSQVEDILERIKTKPSVEGYLIANQTGQ
VLRRSPKMNEDEAHGMATTMRPLVLKAENVVRDLDPQNELQFLRIKTKNR
EIISTISTLKTVFFILGLRSYYAHTNLIYCRRRLSGDRPTAVEPVYRLTA back to topmRNA from alignment at CM002456.1:381135..384596+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna771 ID=rna771|Name=rna771|organism=Nannochloropsis gaditana|type=mRNA|length=3462bp|location=Sequence derived from alignment at CM002456.1:381135..384596+ (Nannochloropsis gaditana)
AGAGACATATGATACGAAGCCTGACCCCATTTGCCTTGTGATACGATACT
TCACAATATGACAGTAATGAGCGTCAGCACTTAGTTCTTTAACGTGCGGC
AATGCGCCGCATGAAAAATGTGCTGATCTATCAAAGCACGAAGTGAACGC
ATTTGGTCTTACTGATCGCCATGACCTGGTAAACTGCCAGCTTTCATCAA
CGACATAAAGCTCGATTTTCAAGTCAAGTGGCTTGATGTACGTCAAAGAG
ACAGAGGCGCAGTTTCACAACACAAAAGCAGAACTTTCTGTACCATAGTC
TGCGGGCCTGCATGTACTTTCACGCTAGGGTAGGCAAAAAAAACAGAACC
TCAGTGCGCAGGGATAGCTGTGAGAGCGAGACCCGCGGCTGCATGCCATC
TGGATCTGACAAGCAGTATCCAAACGAGACAATTCCGAGAAGCAAGACCC
GCTACATCAGGGTCCCGTAAACTCAGGAAAATGTGGGGTATAGTGCAGTG
TCTTTCGAGCGGGTTCAACTTCATTGATGAACGTGAGTGAGTCTCCCTGG
GGACCAATACTCCGCCGTGCCATAATGTTAAGAGAACACTGACTGCTTCG
CAGAGCGGAAGCGATACAATACTTGAAAAAGGACAGCACGAAGGCAATGC
ATGACAAAGCGATTTTGTTCATGTCGCCACAAGAAATACACCACACGTGC
TTCCACTCGTCCCCACGCCAGGTCATTGGATAGCATGTCTTATCGCGCCG
TACGTGTTTTAAAGTAAGTGACCCATCACAGTGATTTATATGAAGCGTAA
TGTTGCGGAGCGTTTACAATGTAGTTCTGTGACCAGATGCTGTTGGCCTC
CGCATGTGTGCGTTGCCCACCTAGATTATTACGGTACCTTGCTTCTTTAT
GTGTTTCAGCATGTCATGTCACATCGTTCACTTCTACACCGAGATGATGA
ATTGCAACCTTTGGATTATTTTCATGCAAGCAGCTTCTGAAGCTCCTGCG
AAAAAGTAGTATCGGCGACCCATCCTTTTTTATAGGCTGCTAGTAACTAC
GTGGAAGGTAATGTAGTGGACGAAGATATTGTGGTGAGAGGATGATTGAT
TTTCCGTGAAGGCCCGCTGTGAGAGTCTACACTCTTCTCAAGAATCTCTG
AAACCATTTCTACCTACCTGTGTAACGTCCTTTTTCCGGGGGTGGCTCCC
GGTCGACGAAATCAATGTGGCAGATGCTACGGCGATGGCGTTCTTGCTGT
CGCGGGTACTATTGTTGCTCTCATTGTTCACCATGGCTGTCCTGCCACTG
TAAGTGGTCAGACCGTCTCTCTTTGCATGATTTATGGGGTGAAACTTCTT
AACTTGCGTGTTGCTACTGTCGCTATTGTTGTCGAGCAGGAATTTCACAC
CTACTCGAGGCCCTGCCACTCCAATCGTTTTCCTCGCAGTCGCTCTATGT
GGCGCTATGCTCATCCTTCCACCTGTGCTGCCCGTGGCTTCCAGCGTCTG
TCCTGCTTCCTCTGACCTTTTCCCAAACGACTTTTTTCTCGTGATGGCCT
GCGGCTTCACATACAATTGCACACCGCGTTTGCTGCCGTGCCCGTCTTTT
ATACCTTTCACCGAATTACCATAACGCACTTGGACGATTCGTCTCAAAGG
TTGAGGTTTCGCCGTTGGTTGATTACTTTTTATGAAATAGGGATGAAATA
TTAGGGGTGGATCAGAGAGAAGCATTTTAACTATTGCTTCGTCCATGACG
TGACGTTTGCCCTCCGCTCAACAATTGGGACATCTTCAGACGATCGACAG
CGTCAAAATATGCACGAGGCTGGCACAGACAATCCGTTCATTTTCACTTA
CTTCACTGCCATCACGATACGTTGGGTTCCGCTGGGTGCTTTCATGAACT
GCTTCCTCTTGGCATCCTTTGCAGCGCTGGCCTTCGGCGTGTTCATACTA
ACCTGGCCCGTTCGAGAGGAATGCAGCTGAGCTGGTGCGTTGGATAGGGC
AACTCGAGCAAACAAGTGAAAGAAGAGTGATGGAAGCATCGATTCAAAGT
TACCCACGATCGTCATGAAGAGGGCTGCTTAACACTTTATTCAGTGCGCG
AAAGATGAAGCATTCAATCGACTGATTTTCTAAAAAAAGATCCATTATTG
GACTCCATTACATGTGTTTATGCCGACCTTACGTGTCATGCCGGAGTTTT
GAATTTATTTGCATCTTCTTGTCCCCGACTTTTGAACGAGGAGGTCGCCC
AACGCTCGAACAAAGCACGCAGTTCTGCTCCCCTGTATCGCAACCGCTAC
ACGAATCACCTACCAAGCGTGGCTTCAAACTTGCCAAGCGTAGTGGGCAA
GGGGCAAGGCCTCTTTTCGTGTTCACACAAGAAAACGCAGGCCCTAAAGA
CATGGTCTCCCGCTAGTAACGGTTTTCCGAGTTTTCCTCACTTTCACGGC
GCAATTACTAGGTGGATTAAAACATTAGCAGAACAAAGTTTCATTCCAAC
ATTCATCCAAATAGGTACTTATTCAAGGATAAACACCAAAGGCCACAGTT
TCATTATGGTAAGCCTTTTTCGTTTCATTTTCGAATATTACAAGCATAAC
TATGTAAAATTTCCATTCTGGAAGTCgcaggtggaggacatcCTGGAGCG
CATCAAGACGAAACCGAGTGTGGAAGGGTGAGTTTTGTATGTTTATCATA
TTTTAACAAGGTGGAATATCTTACAGAGCCCCGCACAATCTTGCCAGCTA
CCTAATTGCAAATCAAACAGGCCAAGTTCTTCGCCGCTCACCAAAAATGA
ATGAGGACGAAGCACATGGCATGGCGACCACTATGCGACCACTAGTCTTG
AAAGCAGAAAATGTCGTGAGAGATCTAGATCCACAGGTAAGACTCCCTAA
CTCTTCACCAAAAAGGGGCCAGAGATTTCCCTCCTTTAAGATTTCTtccg
cccttctctttcctttcttcacaATCTACATCGCTAGAACGAGCTACAAT
TTCTGCGCATCAAAACGAAGAATCGAGAAATTATTTCTACCATTAGTACG
TTGAAGACTGTCTTTTTCATCCTTGGACTTCGTTCATATTATGCACATAC
CAACCTTATATATTGCAGGCGACGACTTTCTGGTGACCGTCCTACAGCGG
TGGAGCCCGTCTACCGCTTGACGGCTTAATTTCCAATTTTTCTAGAAAGC
AAAAAGGCTTGCAACGGCACTATGTATGCAAAGTTTGGGCAATTTTCGTT
ACTTGTTACTGTTGTGTCTGAACGAACGTTACTTGTTACTGTTGTGTCTG
AACGAACGTTACTTGTTACTGTTGCGTCGGAACGAAGCATCGGCATGCAC
TTTACTAACATTTTATTGCTTGTGACGGTCATGCACAAAAATAATGCGGG
AAGTTAAAGTATGTCAAATAAAGAACTTTGGATAAAGCACTAAAAAAAAC
TAAAATACAATG back to topCoding sequence (CDS) from alignment at CM002456.1:381135..384596+ >rna771 ID=rna771|Name=rna771|organism=Nannochloropsis gaditana|type=CDS|length=1359bp|location=Sequence derived from alignment at CM002456.1:381135..384596+ (Nannochloropsis gaditana)
ATGGTAAGCCTTTTTCGTTTCATTTTCGAATATTACAAGCATAACTATGT
AAAATTTCCATTCTGGAAGTCgcaggtggaggacatcCTGGAGCGCATCA
AGACGAAACCGAGTGTGGAAGGCTACCTAATTGCAAATCAAACAGGCCAA
GTTCTTCGCCGCTCACCAAAAATGAATGAGGACGAAGCACATGGCATGGC
GACCACTATGCGACCACTAGTCTTGAAAGCAGAAAATGTCGTGAGAGATC
TAGATCCACAGAACGAGCTACAATTTCTGCGCATCAAAACGAAGAATCGA
GAAATTATTTCTACCATTAGTACGTTGAAGACTGTCTTTTTCATCCTTGG
ACTTCGTTCATATTATGCACATACCAACCTTATATATTGCAGGCGACGAC
TTTCTGGTGACCGTCCTACAGCGGTGGAGCCCGTCTACCGCTTGACGGCT
TAAATGGTAAGCCTTTTTCGTTTCATTTTCGAATATTACAAGCATAACTA
TGTAAAATTTCCATTCTGGAAGTCgcaggtggaggacatcCTGGAGCGCA
TCAAGACGAAACCGAGTGTGGAAGGCTACCTAATTGCAAATCAAACAGGC
CAAGTTCTTCGCCGCTCACCAAAAATGAATGAGGACGAAGCACATGGCAT
GGCGACCACTATGCGACCACTAGTCTTGAAAGCAGAAAATGTCGTGAGAG
ATCTAGATCCACAGAACGAGCTACAATTTCTGCGCATCAAAACGAAGAAT
CGAGAAATTATTTCTACCATTAGTACGTTGAAGACTGTCTTTTTCATCCT
TGGACTTCGTTCATATTATGCACATACCAACCTTATATATTGCAGGCGAC
GACTTTCTGGTGACCGTCCTACAGCGGTGGAGCCCGTCTACCGCTTGACG
GCTTAAATGGTAAGCCTTTTTCGTTTCATTTTCGAATATTACAAGCATAA
CTATGTAAAATTTCCATTCTGGAAGTCgcaggtggaggacatcCTGGAGC
GCATCAAGACGAAACCGAGTGTGGAAGGCTACCTAATTGCAAATCAAACA
GGCCAAGTTCTTCGCCGCTCACCAAAAATGAATGAGGACGAAGCACATGG
CATGGCGACCACTATGCGACCACTAGTCTTGAAAGCAGAAAATGTCGTGA
GAGATCTAGATCCACAGAACGAGCTACAATTTCTGCGCATCAAAACGAAG
AATCGAGAAATTATTTCTACCATTAGTACGTTGAAGACTGTCTTTTTCAT
CCTTGGACTTCGTTCATATTATGCACATACCAACCTTATATATTGCAGGC
GACGACTTTCTGGTGACCGTCCTACAGCGGTGGAGCCCGTCTACCGCTTG
ACGGCTTAA back to top
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