rna7695, rna7695 (mRNA) Nannochloropsis gaditana

Overview
Namerna7695
Unique Namerna7695
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length516
Alignment locationCM002473.1:104354..105034 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102019g1.6272.mrna
Orig protein idgnl|cribi|Naga_102019g1.6272
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:104354..105034 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102019g1gene7449Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22999.1cds7674Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7695rna7695-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7695 ID=rna7695|Name=rna7695|organism=Nannochloropsis gaditana|type=mRNA|length=516bp
ATGCCTCGCGTGTCCGACGCTTCTTCATCTTCCCCTTCTCGCCCCGTCAA
ACCCTCTTGTCGGGACCCGCCACGCCCTTCCGACCGCCCCAGGGGCAATG
CCCTTCACACCCCAGGCCGAAGCCAATCAGGGGACCCCCCCCCCCTGAAA
CGGGGCCGTCAAGCCTCCATACAGGATGCCTTTGCGTCCACCCCTGCTTT
CAACCCCGAATTCTCGCAGCCCGTGGCCACCTTCCCAGAAAAAGGCGAAG
TGATCGACGTGGAAGCGGAGGGGCTCATGGAGGGAGAAGGAGGCAAGGAG
GGAGATCTCATGCCACCCGAGACACAAAAGACGCCGGCGAAAGTGCCAGA
GACGCGGGCTACGAGAAAGTCGGGCGTGGAGGGGGAGGACTGGCAGCAGA
AAGGGAAGCGGACAGACAAGATGAAGGCGGCAGTGGAGGTGGTGGAGGAG
GAAGAGGAAGGCCCAGAGGAGGGAGGGAGGTTTGTACCAATCCACTTGCA
CAAGGTAAGTGCCTAG
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protein sequence of rna7695

>rna7695-protein ID=rna7695-protein|Name=rna7695|organism=Nannochloropsis gaditana|type=polypeptide|length=133bp
MVTPWEGKETRKRPGGGGNAFAQLFKKNSAGRGQKNASVYGREGEIGKET
RTERNFFEIISRCISKSKEHCGMMGNRRGSGQCSSERHEYGCVALWGMAS
LLSLWFAHTTGIRAETPVVEAAVAAVDFNFNSY
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mRNA from alignment at CM002473.1:104354..105034-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7695 ID=rna7695|Name=rna7695|organism=Nannochloropsis gaditana|type=mRNA|length=681bp|location=Sequence derived from alignment at CM002473.1:104354..105034- (Nannochloropsis gaditana)
CTCCCTCCCTCCCTCCCTCGATATCCATTCCTCCCTCTCTGCCTCCCTGT
TTCACCGAATCCTAATCGCCGCCCCCGTTTCTTCACTCCCTCATCCTCTC
TTCTCTTTTCGCTCTCCCTCCCTCTCTCCCTCCTTCTCTCCCTCCCTCCC
TCCCAGGTCTTATACATCAAGAGCACCATGGGCCCTCGGTTCCAGATTTA
CTTCTAGAATGTTTGCGCGCGGAGGAAGGAAGGAAGGGAGGGAAGGAGGG
AGGGAAGGATGGTAACGCCGTGGGAGGGAAAGGAGACAAGAAAGCGACCC
GGAGGTGGAGGAAACGCGTTCGCGCAACTTTTTAAGAAGAATTCCGCGGG
GAGGGGGCAGAAAAACGCGTCAGTCTACGGAAGGGAGGGCGAAATAGGAA
AAGAAACAAGAACCGAAAGAAACTTTTTTGAAATCATATCCCGTTGCATC
TCCAAGAGTAAGGAGCACTGCGGTATGATGGGAAATCGGAGAGGTTCAGG
TCAATGCTCAAGTGAGAGGCATGAGTACGGTTGCGTGGCTTTGTGGGGAA
TGGCGTCACTCCTGTCTCTGTGGTTTGCACATACTACTGGGATCCGTGCC
GAAACGCCCGTGGTAGAGGCAGCCGTCGCTGCCGTTGATTTTAATTTTAA
TTCGTACTGAATAATTCTGTCTTCTATTTCT
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Coding sequence (CDS) from alignment at CM002473.1:104354..105034-

>rna7695 ID=rna7695|Name=rna7695|organism=Nannochloropsis gaditana|type=CDS|length=402bp|location=Sequence derived from alignment at CM002473.1:104354..105034- (Nannochloropsis gaditana)
ATGGTAACGCCGTGGGAGGGAAAGGAGACAAGAAAGCGACCCGGAGGTGG
AGGAAACGCGTTCGCGCAACTTTTTAAGAAGAATTCCGCGGGGAGGGGGC
AGAAAAACGCGTCAGTCTACGGAAGGGAGGGCGAAATAGGAAAAGAAACA
AGAACCGAAAGAAACTTTTTTGAAATCATATCCCGTTGCATCTCCAAGAG
TAAGGAGCACTGCGGTATGATGGGAAATCGGAGAGGTTCAGGTCAATGCT
CAAGTGAGAGGCATGAGTACGGTTGCGTGGCTTTGTGGGGAATGGCGTCA
CTCCTGTCTCTGTGGTTTGCACATACTACTGGGATCCGTGCCGAAACGCC
CGTGGTAGAGGCAGCCGTCGCTGCCGTTGATTTTAATTTTAATTCGTACT
GA
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Synonyms
Publications