rna7689, rna7689 (mRNA) Nannochloropsis gaditana

Overview
Namerna7689
Unique Namerna7689
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:69409..69788 +

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100905g2.4525.mrna
Orig protein idgnl|cribi|Naga_100905g2.4525
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:69409..69788 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100905g2gene7443Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7689rna7689-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23005.1cds7668Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

protein sequence of rna7689

>rna7689-protein ID=rna7689-protein|Name=rna7689|organism=Nannochloropsis gaditana|type=polypeptide|length=109bp
MFFSCRLVVIEVGIFFPSILACGAFKKAFLNITTHPLKRFSALECRTLDA
GIGGRRGIHVMAFGLSIRAFRTIQIGSYCPLCHVNKTEIRINTKYAIYYR
SSYFKIFKK
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mRNA from alignment at CM002473.1:69409..69788+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7689 ID=rna7689|Name=rna7689|organism=Nannochloropsis gaditana|type=mRNA|length=380bp|location=Sequence derived from alignment at CM002473.1:69409..69788+ (Nannochloropsis gaditana)
ATGTTTTTTTCCTGTCGTTTGGTGGTGATAGAGGTAGGtatattttttcc
ctccattttgGCCTGTGGAGCCTTCAAGAAGGCTTTCTTGAATATCACAA
CGCACCCACTCAAGCGTTTTTCAGCACTAGAATGTAGAACTTTGGATGCG
GGCATAGGTGGTCGTAGGGGCATACATGTCATGGCATTCGGCTTGAGTAT
TCGGTTCTAGGCTCTGTGGTCCTCCTTTCtgtcaacctcctcccttttga
AAGCGCATTTCGTACTATCCAAATTGGATCATATTGCCCTTTGTGTCATG
TCAACAAGACCGAAATACGCATTAACACCAAATACGCAATATATTATCGT
AGCAGCTACTTCAAAATCTTCAAAAAGTAA
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Coding sequence (CDS) from alignment at CM002473.1:69409..69788+

>rna7689 ID=rna7689|Name=rna7689|organism=Nannochloropsis gaditana|type=CDS|length=660bp|location=Sequence derived from alignment at CM002473.1:69409..69788+ (Nannochloropsis gaditana)
ATGTTTTTTTCCTGTCGTTTGGTGGTGATAGAGGTAGGtatattttttcc
ctccattttgGCCTGTGGAGCCTTCAAGAAGGCTTTCTTGAATATCACAA
CGCACCCACTCAAGCGTTTTTCAGCACTAGAATGTAGAACTTTGGATGCG
GGCATAGGTGGTCGTAGGGGCATACATGTCATGGCATTCGGCTTGAGTAT
TCGCGCATTTCGTACTATCCAAATTGGATCATATTGCCCTTTGTGTCATG
TCAACAAGACCGAAATACGCATTAACACCAAATACGCAATATATTATCGT
AGCAGCTACTTCAAAATCTTCAAAAAGTAAATGTTTTTTTCCTGTCGTTT
GGTGGTGATAGAGGTAGGtatattttttccctccattttgGCCTGTGGAG
CCTTCAAGAAGGCTTTCTTGAATATCACAACGCACCCACTCAAGCGTTTT
TCAGCACTAGAATGTAGAACTTTGGATGCGGGCATAGGTGGTCGTAGGGG
CATACATGTCATGGCATTCGGCTTGAGTATTCGCGCATTTCGTACTATCC
AAATTGGATCATATTGCCCTTTGTGTCATGTCAACAAGACCGAAATACGC
ATTAACACCAAATACGCAATATATTATCGTAGCAGCTACTTCAAAATCTT
CAAAAAGTAA
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Synonyms
Publications