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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100570g1.9716.mrna |
| Orig protein id | gnl|cribi|Naga_100570g1.9716 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:468479..473066 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7648 ID=rna7648|Name=rna7648|organism=Nannochloropsis gaditana|type=mRNA|length=1279bp
CCGCAAAGGCACGCCTCCTCCACTTTTGTCCGCGTGGATCGACAGGGTAA
GAATTGCATCGTGCTGTGTAGAGAAAGGCTGACGACTCCTTTCCTTTGTT
TCCTGGCTTTTCACACAGTGTGGCAAGGAGACGTTGGAGTTACGCTAGTT
GCACAAGCAGCATGCCTTCAATGTGGTCAACACCAGGTCCGAGAAGACCG
AAGCTCAGCATCATCGTCCTGGGCATATTTTTCCTTCCGTCCGTCCAGGG
CTTCCTTCATCCACCTCTCCCCGCCTTGCTTCAAATTTCTTATCCGCTGT
CTGCCGGTCGCTCCTCCTCCTCCTCGGGCGGTCAGCAGGCTCCCACCGAA
CATGTAAATCAACAAAAGCGGCGAAAACAGCCATTAGGACCAGAGATAGG
ATCCCAGTCGGATGAAGAGAAAGGAAAAGCACAAGCCAATGCTGACAGCC
CCCTCTCTCCCTCGAACCCTCCCGACCGCTCCTCCCCCGCCCTCTCGCCT
TCGGCCGCGGCTCGTCTAGAGCGCTTGCCCGACGACACGGAAGAAAGGAT
CGAGGTGGTGCGTGTGCCCGACTTTGAGGAAATGCTTGCCTGGGCGATTA
GGATGGATGCGCGCGTGGAACGCCGGCGTATCGCGGGCCTAGGCGGCCTG
GTGGCAGAGCCTCCTTCTCCCCAAGTAGACCTGACCAAGAGGCGGCCGCT
CTCAAAGAGGGATGAAGATAAAATGAACACCGTCATAAGAATGCTTTCCC
AGCGCGCGGAGAGCAAGCGTGTTTTCTACCCGAATGAGATGGAGGAGCTT
CGTGAGGCGCTCCGGGACATGGAGTCGTTGATGAAGGACGATGCCGAGCA
CCTCAAGAAGGCGCAACAAGACGCACTCATCCTCAACAAGGCTGGGAGAG
CCAAGAGCCGCTTCCAGAAGAAGCGGGAGGTGATGATCGAGGAGACCGGG
GACTTCGATCCCATCTACGGGAGCAAAGAAGTCCGCGATCAGATCTATTT
GTATCTGTGGTCTCTGGTCAAGCGAGAACCTCGCCTTTTAGTGACGCCCT
GGAGCGAGGGGGAGGAGGAAGAGGGGAAGGATGGCAGGGGCGAGCAGGAA
GGGGACTAGGAAAGAAGAGAGGAAGGAGTTTTGTACAGATAGCATGGCGC
CATCCATGTGTGCAGAGGGGTGAGAAATGAAGGCGAGGTCGTGGAGCCGA
AACGTCACTTGAAGGCTCTCCCACGTTACTTCCCTGTGCGAGATCTTTGT
TGAAGAAAGTAATGGCTGCTTCTTCTTAT back to topprotein sequence of rna7648 >rna7648-protein ID=rna7648-protein|Name=rna7648|organism=Nannochloropsis gaditana|type=polypeptide|length=480bp
MAVSFAPVNNTSKRPLAPVPLEKGGMPWQSVLATKGALAALDQAADRLLP
PVLPRGLRGKGGVDDVEELTRTQPLQWSHVLGQFQVVPCSNGQAGSSLQP
ALPPALFAVEGRREGLEAGRVEGEAGVTRTRSRRAMSRGERGEADRGNGL
GSLEGRPKASGVTGATEREDGNEEREADSCNPEGDFPLSLVQSEIPAPTF
RRLDSPEAAVEGGEGREREEGREEKEGEEEGEEEEEEDISDEAILARHEE
TLKQIWERYARWRELRKRQRPPRPPVHSRSSPFFLLRPLLLVRVEECVEA
PTEEWEGEEKDGRCSGSSSCGGSCGSCRRYWRWLAPCGRKRRERRSGECW
GEGRGRGGREDRGHIFLPGRGCRSGREGGRAGGEEGRGRKTRRGRGDPRP
ARFPSFLHLLLDLGFHKRRREGVWRGRGGEQRLLFLLLHLLTQRAGGSGK
GGEEYGELEAEEDHVEGRGVCGREGAREGG back to topmRNA from alignment at CM002472.1:468479..473066- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna7648 ID=rna7648|Name=rna7648|organism=Nannochloropsis gaditana|type=mRNA|length=4588bp|location=Sequence derived from alignment at CM002472.1:468479..473066- (Nannochloropsis gaditana)
CCCCTCCCTCCGCTCCCCCCGCTGTGGATACCTCCGATTCTACCACCACC
AGTGCCTCCTCCTCTTCTTCCCCTGTCGTGGCTTCCTGCTCTCAAACATC
GGAGCAAGGTAAGTCAGGGAGGGAGGGAAAGAGAGAGAGAGGGAGGGCGG
GGGGCACCAAAACGAAAACATAGCATCGGCAGCGAATCAGCTGGTTCGGC
CTCGAAATCTGAGTTCCATCACGCTCACCCCTTTCTTCCTGACCCTTTCC
TCGCGGTTTCTTTCTTCTTCCTTCAGTCCCGCACGTCTCCCTCTTCCTCG
TCTCTGCGGACCCGCTTCCCGCCCCCCCGCCCCCGGGCCTCCTTCCCCTT
CTCAATCCCGTCGCCGCCCCCTCCCCCGCCCCCTCCACTGGCACCTCTCT
CCAGCCCTCCTTCCACGCCGCGGTCCCTCCCTCTCTCCACGCTTCCACGC
CGGTGGGCTGCATCTATGAATTTCTCTGGGGGTTGGCGAGGGAGGTGGCG
GAGGAGGAGGGAGGGAAGGATGCCTTGCCGCTTCTGCCGCTGGGTCGCTG
CTGGTAAGGGCAGATTGGTGGTGGGCGAGTGAATTGAGCAGGACGGGTGG
TATGGAATGGATAGAAGGTAGATGAGAATGGTATCGGTTTTCTTGAGAAA
CTCTGCGAGACACATGCCCCGGCAGCCCTAGCGCCTGATTTCCACCCTTT
CTTTTCTCCCGCCCGCCCGCCCTCTCGTCCCCTCTCCAGCCCTCCCCAGG
GGCCCGAAGGCAAGCCCGCCTCTGTCCAGGAGAAAGACGTATTGGTGGTG
CTGGAGAGAGAGATGGACGCCTTCTTTGGGGACGCGGTGGGGCGCATCGG
CCTGCTCGTGCAGCGACGGCGGACGGTGGCACGCTTACAGCATGTACGAC
CCTCCGTCCCTCCCTCCCTCCCTCCCCCCCTCCTTCTTCGCCTTCTTTCG
TTTCGTTCCTTCAGTCGTGCTTTTCCATTTCCTGAATTTACCAAAGAATC
TGTCCTGGGCCTAAATTCTCAGCCTCACACGCCTCGCACGCTTTCCCCCC
TGTCCCTCGTCAAACCCACAGGAGGAGGAATCCTTGGTGCGCACTCTTTT
GCACCACTACAGTGTTAAGGTACTTATCTCCTTTCATAGCACTTCCCTTC
ATGTTGTGTCTCTTAATCCTATTTTAAATCCTGTCGCCCAATCCTCCCTC
CTTCCTCCTCCTTACCCTCTTTCCTTTCCTCCTTTTATCCCATCTTTCCT
TGTCCCCTCCCTCCCTTCCTCCCTCCCTCCCGCCCTCCCTCCCTCCGTCT
CGTGCAGGTTGACCACCAGTCGTTGCTTTTGCAGATGCAGCGCCTGGATG
AGGCGAGGGAGAAGGGGGAGGTGGGAGGTAAGCACGCGCATGCCGGCAAT
GCGCAGGATCTCCCCAGTCTAACTCCCTCGTTTCCCTTTCCCTCCGTGCT
CTCCCGCCACCCCCAGCCATAGACTTGCTCTCCTTCCCTCCCTCTGCCCT
GCCCTCCTCCCCACTTCAAGGAGAGGAGGAAGGCCCCGTTCAAGACGTGA
GGGAGGGGGAGAGGGAGGGAGAGAGGGAGGGGCGCCCCTCTCGGTCGGCC
CCGGCTCAGCTGTCGAACAAGAAGGGAGGAGGGAGCAAGCACAAAGTTGC
CGCTCTCAACACTTCCCTCCCTACCTCCTCCTCCTCCTCGACCACGCCCA
CCCCTGCCTCTGCCCGTGTGAAGGGGAGGGCGGTCATCCCCCTCCTCCGT
ATTCCCGCCCCCATCGCCTCTTCCTCCTCCTCCTCTTCTTCGTCAACGGG
TCGAGGCCGGAGTGCCAGCGAAGGAGGTGGGTGACGTCGGTCAAGTTGGG
GGGCGGTAGAGGCAGGACAGGCTGAGCGGGAGCGGCGTATAGGACGCGAT
TTCGCAGACACGAGCGCGGCCCACACGGGGAATTGCGTCGCAAAAGAGCC
CCTGAGTCTCACGCCTTCCTTCCCTTTCCTCTCTCGTACTGACAGGCGCC
CTATCCTCTTCCTCGAGCCCGTACCCGTTCAAACGACGCAAACGATCCTC
CTCCAGCGTCAGCGACATCCCCCCCGCCCTGGTGGCGGGCTACCTCCGGC
CCTCGCCCTCCCCCTTCCGAGACGAGAAGGAAAAGCTTCGGCATCTAGAA
GGTCTGACGGTGGAAGAGCTGCAACGGAAAGCGCGAAAGCGGGGCCAAAT
CCGGGCGGGATCGTGGGGGGGGAGCGGGGTCTCCCACGTGGACGGGAGGG
AGGGAGGGAGAGAGGGAGGGGTGACTCCCAAAGGGGGGTACGGCGGGGAA
GGAGGAAGGGACGGCGGACTGAGCGTCTGGGCGAGTTTGGAAGAGATGGC
GGTGTCCTTCGCGCCCGTGAACAACACAAGCAAGCGGCCGCTGGCACCCG
TACCCCTGGAGAAGGGGGGCATGCCCTGGCAAAGCGTGCTGGCCACCAAG
GGGGCCTTGGCGGCCCTGGATCAGGCTGCCGACCGGCTCCTTCCTCCCGT
CCTCCCCCGCGGCCTCCGGGGGAAGGGAGGGGTGGACGACGTGGAGGAGT
TGACTCGGACGCAGCCGTTGCAGTGGAGCCACGTTCTGGGGCAGTTTCAG
GTGGTGCCCTGCAGCAACGGCCAGGCGGGGTCTTCCCTCCAGCCCGCCCT
CCCTCCCGCCCTGTTCGCGGTGGAAGGGCGGAGGGAGGGGTTGGAGGCGG
GGAGGGTAGAGGGGGAGGCAGGGGTGACACGGACTCGCAGCAGGCGTGCG
ATGTCTCGGGGGGAGAGAGGGGAGGCAGACCGTGGGAACGGCCTCGGGAG
CTTGGAGGGGCGTCCGAAGGCTTCCGGTGTAACGGGCGCGACGGAGAGGG
AGGACGGGAACGAGGAGAGGGAGGCAGATAGCTGCAACCCAGAGGGCGAC
TTCCCGCTCTCCCTCGTGCAGAGTGAGATTCCCGCCCCGACATTCCGAAG
GCTCGATTCTCCGGAGGCGGCGGTGGAGGGGGGGGAGGGGAGGGAGAGGG
AGGAAGGGAGGGAGGAGAAGGAGGGGGAGGAAGAGGGGGAGGAGGAAGAA
GAGGAAGACATCTCGGATGAAGCCATTTTGGCCCGACATGAAGAGACCCT
GAAGCAGATATGGGAAAGGTATGCGCGGTGGCGCGAGTTAAGAAAACGTC
AACGCCCCCCCCGCCCACCGGTCCACTCACGGTCATCACCGTTCTTCCTC
CTCCGCCCTCTCCTCCTTGTCCGCGTCGAAGAATGCGTCGAGGCGCCGAC
AGAGGAATGGGAGGGTGAGGAGAAAGACGGTAGGTGCAGCGGCAGCAGCA
GTTGCGGCGGCAGCTGCGGCAGCTGCCGCCGCTACTGGCGTTGGCTCGCA
CCCTGTGGAAGAAAACGAAGGGAGCGCAGAAGTGGAGAGTGCTGGGGAGA
AGGTAGAGGAAGGGGGGGAAGGGAGGACAGAGGTCACATCTTCCTCCCTG
GTCGGGGTTGTCGGTCAGGAAGGGAAGGAGGAAGGGCAGGAGGAGAGGAA
GGAAGAGGAAGGAAAACAAGGCGAGGGCGAGGAGACCCCCGTCCTGCTCG
GTTCCCCTCCTTCCTCCACCTCCTCCTCGATCTCGGCTTCCATAAGCGAA
GAAGGGAGGGAGTGTGGCGAGGAAGGGGAGGAGAACAGCGTCTCCTCTTC
CTCCTCCTCCACCTCCTCACTCAGCGGGCGGGAGGTAGCGGGAAGGGAGG
CGAGGAGTATGGAGAACTCGAAGCGGAGGAGGATCATGTTGAGGGAAGAG
GGGTCTGTGGAAGGGAGGGCGCGAGGGAGGGCGGATAGCCGTGAGCTGAA
GATTTCCTCTGTACGGGCCTCGCAACCTCAATGAGGATGGGAAGATTCTA
TGCGCTTTCTTGCGTTTTCCTACCTCCCTTCATTCTACCTCCCGTCGCTC
AAAGCGGCGAAACAGGGGTGTATGGAAGTTTTTTTGGGGGGGGGTCGGTG
ATCAGGGCAAAGCGGTGGTATGGCGGGGCCGGAGGGAAGGGAAGAAGGAA
TGGAATGTGGCATATGTTGTGATAAGGAAGACAAAGGCGGCGTGGGGATT
CACGCCGGAGAAAGAAAATCCATGTATTGTAAAGCGGTGGAGAGGTCCCT
TGGAGAGGTGCCATGCCAGGAACGACGCCTGCCTGTGTGACGCATTGTGG
AGGCGAGAGATCGAATTGTCGTCTCCGACAGTGATCACGGTCCCTCCACA
GAGCAGGGAAAAGTTAGGGAAGGCACCTTTGGGAATGCAAAGAGGAGAGC
GGAGCGCCACAGAGGGTATGCCGGAGGACGGCCGCCTGATATCGATGTAG
GAGGTAAAGACGCGGTAAATGGGTGCAGGGGGACGGGGAGGGAGGTATTT
TGAGCGAAGCCAGGAGGGCGAATCAAGGCCTGAGGACTATATAAAATGAG
AGAGACAGTGTGGTAGCTGGCGCTTGAAATTTTGCACCCGTGGCGGTATG
CTGCCGGAATGGGTACCTAAACCATCATACTCAAACTGCAGGAAGATGAC
GGAGACAAGGGTCTCGGCTAATGATTTGAACAAAGAAGGAAGTCACGTCA
AGCTTGAAAAGCGACAGAATGGATAAGAAGAAGCAGCC back to topCoding sequence (CDS) from alignment at CM002472.1:468479..473066- >rna7648 ID=rna7648|Name=rna7648|organism=Nannochloropsis gaditana|type=CDS|length=1443bp|location=Sequence derived from alignment at CM002472.1:468479..473066- (Nannochloropsis gaditana)
ATGGCGGTGTCCTTCGCGCCCGTGAACAACACAAGCAAGCGGCCGCTGGC
ACCCGTACCCCTGGAGAAGGGGGGCATGCCCTGGCAAAGCGTGCTGGCCA
CCAAGGGGGCCTTGGCGGCCCTGGATCAGGCTGCCGACCGGCTCCTTCCT
CCCGTCCTCCCCCGCGGCCTCCGGGGGAAGGGAGGGGTGGACGACGTGGA
GGAGTTGACTCGGACGCAGCCGTTGCAGTGGAGCCACGTTCTGGGGCAGT
TTCAGGTGGTGCCCTGCAGCAACGGCCAGGCGGGGTCTTCCCTCCAGCCC
GCCCTCCCTCCCGCCCTGTTCGCGGTGGAAGGGCGGAGGGAGGGGTTGGA
GGCGGGGAGGGTAGAGGGGGAGGCAGGGGTGACACGGACTCGCAGCAGGC
GTGCGATGTCTCGGGGGGAGAGAGGGGAGGCAGACCGTGGGAACGGCCTC
GGGAGCTTGGAGGGGCGTCCGAAGGCTTCCGGTGTAACGGGCGCGACGGA
GAGGGAGGACGGGAACGAGGAGAGGGAGGCAGATAGCTGCAACCCAGAGG
GCGACTTCCCGCTCTCCCTCGTGCAGAGTGAGATTCCCGCCCCGACATTC
CGAAGGCTCGATTCTCCGGAGGCGGCGGTGGAGGGGGGGGAGGGGAGGGA
GAGGGAGGAAGGGAGGGAGGAGAAGGAGGGGGAGGAAGAGGGGGAGGAGG
AAGAAGAGGAAGACATCTCGGATGAAGCCATTTTGGCCCGACATGAAGAG
ACCCTGAAGCAGATATGGGAAAGGTATGCGCGGTGGCGCGAGTTAAGAAA
ACGTCAACGCCCCCCCCGCCCACCGGTCCACTCACGGTCATCACCGTTCT
TCCTCCTCCGCCCTCTCCTCCTTGTCCGCGTCGAAGAATGCGTCGAGGCG
CCGACAGAGGAATGGGAGGGTGAGGAGAAAGACGGTAGGTGCAGCGGCAG
CAGCAGTTGCGGCGGCAGCTGCGGCAGCTGCCGCCGCTACTGGCGTTGGC
TCGCACCCTGTGGAAGAAAACGAAGGGAGCGCAGAAGTGGAGAGTGCTGG
GGAGAAGGTAGAGGAAGGGGGGGAAGGGAGGACAGAGGTCACATCTTCCT
CCCTGGTCGGGGTTGTCGGTCAGGAAGGGAAGGAGGAAGGGCAGGAGGAG
AGGAAGGAAGAGGAAGGAAAACAAGGCGAGGGCGAGGAGACCCCCGTCCT
GCTCGGTTCCCCTCCTTCCTCCACCTCCTCCTCGATCTCGGCTTCCATAA
GCGAAGAAGGGAGGGAGTGTGGCGAGGAAGGGGAGGAGAACAGCGTCTCC
TCTTCCTCCTCCTCCACCTCCTCACTCAGCGGGCGGGAGGTAGCGGGAAG
GGAGGCGAGGAGTATGGAGAACTCGAAGCGGAGGAGGATCATGTTGAGGG
AAGAGGGGTCTGTGGAAGGGAGGGCGCGAGGGAGGGCGGATAG back to top
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