rna7636, rna7636 (mRNA) Nannochloropsis gaditana

Overview
Namerna7636
Unique Namerna7636
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length764
Alignment locationCM002472.1:436537..436920 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101947g1.8858.mrna
Orig protein idgnl|cribi|Naga_101947g1.8858
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:436537..436920 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101947g1gene7395Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23058.1cds7616Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7636rna7636-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7636 ID=rna7636|Name=rna7636|organism=Nannochloropsis gaditana|type=mRNA|length=764bp
CTCCCTCGTGCTTGCACCTCGCTCGCCCCCTCTCCCCCCCCCCATGACCT
TGTTGTTTCGTGTATGATGGTCGTCGGGCTCCTCGCGAAGCTCTGAGGCA
CCCTGAGCCTCCCTGCTTCCCGCCCTCCCTTGCTCCCCCCCCTCCCGCCC
GCCAGGTGGAGGAGTGGATCGATGACATGGACAGCCGTCTGACCGCTTTG
AAGAACTTCATACTCCCCTCGGGCGGACTGTGCAGCGCTCATCTTCACCT
GGCACGGACAATATGCCGAAGGGCGGAAAGGAGCGTCATTCCGCTTGTGA
ACTCTGAGCAGGTGGACCCTGAGGTGGGGATTTATCTGAACCGCCTCTCG
GATTTCTTGTTCGTGGCCGCCCGGTGGGCGGCCAAGAGCGAGGGCCACGA
GGAAACCGTGTGGGTGAAAGGCTGAGAAGAGGCGCCAGGGAGGGCGGGAG
GGAGGGCGGGGAGGGGAGAGAGGGCGCGTCGCGGGTGTGAGTCGTACGGG
AAAAAGAGGGAGAGGGGAGGAAGAGAGGGGTTCATGGAAAAAAAATGCAT
GAAAGACGCAGAAGAAGGGGGACGGGCCACAGAGGGAGAGAGGAAGAAGA
GAGAGCTTAAAGCAACGGAGTGTTAGAGCACAGGGAGGGGAAATATCCAT
GTCGGGAGCACGATCATCCGGAAATTCGACGGTTTTCTTTTCATGTTTAG
AGGATGGCTTGCGGCAGTGCCTTTGTCTCAGACATCTCTCTTGTCCACCG
ACCGTCCTCCCTTC
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protein sequence of rna7636

>rna7636-protein ID=rna7636-protein|Name=rna7636|organism=Nannochloropsis gaditana|type=polypeptide|length=83bp
MKKVGRTEKRGREDGVDVVVRGEEGLGYERGKREGGMQRGRAGGRAGGRE
GAASWVRAEGEGREDGRWTREMSETKALPQAIL
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mRNA from alignment at CM002472.1:436537..436920-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7636 ID=rna7636|Name=rna7636|organism=Nannochloropsis gaditana|type=mRNA|length=384bp|location=Sequence derived from alignment at CM002472.1:436537..436920- (Nannochloropsis gaditana)
GAGGGAGGAAGGGATTAATGTAGTTTACTTGGACCGGCCTTGCGGCTGCG
GAAGATTGGAATTGGAGAAATCCGTAATACAAATTTGGCTGGAACTATGA
AAAAAGTGGGGAGGACGGAGAAAAGAGGCAGAGAAGATGGGGTGGACGTT
GTCGTCAGAGGGGAAGAGGGACTCGGATATGAACGGGGGAAGAGGGAGGG
AGGAATGCAACGAGGGAGGGCGGGAGGGAGGGCGGGCGGGAGGGAGGGGG
CAGCTAGTTGGGTTCGGGCCGAGGGGGAGGGAAGGGAGGACGGTCGGTGG
ACAAGAGAGATGTCTGAGACAAAGGCACTGCCGCAAGCCATCCTCTAAAC
ATGAAAAGAAAACCGTCGAATTTCCGGATGATCG
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Coding sequence (CDS) from alignment at CM002472.1:436537..436920-

>rna7636 ID=rna7636|Name=rna7636|organism=Nannochloropsis gaditana|type=CDS|length=252bp|location=Sequence derived from alignment at CM002472.1:436537..436920- (Nannochloropsis gaditana)
ATGAAAAAAGTGGGGAGGACGGAGAAAAGAGGCAGAGAAGATGGGGTGGA
CGTTGTCGTCAGAGGGGAAGAGGGACTCGGATATGAACGGGGGAAGAGGG
AGGGAGGAATGCAACGAGGGAGGGCGGGAGGGAGGGCGGGCGGGAGGGAG
GGGGCAGCTAGTTGGGTTCGGGCCGAGGGGGAGGGAAGGGAGGACGGTCG
GTGGACAAGAGAGATGTCTGAGACAAAGGCACTGCCGCAAGCCATCCTCT
AA
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Synonyms
Publications