rna7634, rna7634 (mRNA) Nannochloropsis gaditana

Overview
Namerna7634
Unique Namerna7634
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length708
Alignment locationCM002472.1:433700..434783 +

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100847g4.9574.mrna
Orig protein idgnl|cribi|Naga_100847g4.9574
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:433700..434783 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100847g4gene7393Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7634rna7634-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23060.1cds7614Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7634 ID=rna7634|Name=rna7634|organism=Nannochloropsis gaditana|type=mRNA|length=708bp
ATGGCCGCTCCTCTTCCTCCTAATACTTCTCGTCTCTCTGCAGCAGCTTA
TCCACCGTCTGCTGTGCATGTTTCAACCGCGCCACCTTCACGTCCCGCCC
GCTACACAAAGGTTGACCTCCTGACGCCTGCCAGTGTAGGACACAACTTG
GTTTTGAGGGTTTTGCGGATTTTAGCCACCTTCGAGAAGGCCCGCGTGGA
TGGAAGCACAACGAAAATTGCCGAGATAGTCGTCGGAGACGAGACCGGGG
TGATCACTCTTCGAGCACGGAACAGCCAAGTAGAGTTCTTCCTGAAAAAA
GTGCAGAAAGAAGAGGAAGAGGAGGAGAAGCCCTGTGTCATTGTCCTGCG
CAATGCCGGCGTCTCCATGTACAAAGGACACATGCGTCTCATCGTCAACA
AATGGGGCAAAATCTCCAGCTACCCGGACGAGGTTGCGTCGACGCCTCCA
CCTCCTGCGGACGTCCTAGGCACCAATGACAAGTCCAGCGTAGAATACGA
GCTTGTGGAACAGATGGCGGCAAAGGAAGGGGGAGAAAGCGAGGAAGAGG
GGGAGGGAACAGAAGCACACGATCTTTTTAATCAGCTTTGTCATCATCAG
ACCAGTACTATCAGGAGCTGTATCAGTGAAACAATCCGATGCAAAAATTA
CTTGACAGGGGATCAGCTTAATTGCAGGGTCGTCAGAATCAACAGAAGAC
ATTGGTAG
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protein sequence of rna7634

>rna7634-protein ID=rna7634-protein|Name=rna7634|organism=Nannochloropsis gaditana|type=polypeptide|length=225bp
MENKPLVGRCVIWPGGMCVGGNCGGISRSLPLFWCGRPPVPLCQDCHAKW
FKLQPSCFCFILPLTPSLTTFTIHSFNIVVRHSPQLGKCRRHNAMLRFVP
SHTTNSQVRVALNNSFRTNRLILGSTCLSLSSRTPSASLKTMAPSILALA
ASAGSNVLGNERTLQKLQGAQLFVGSGVAFLWSMRRWQVKKVDISEGRRR
LQGKRGGWSEGEGRRDAERSCGHDS
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mRNA from alignment at CM002472.1:433700..434783+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7634 ID=rna7634|Name=rna7634|organism=Nannochloropsis gaditana|type=mRNA|length=1084bp|location=Sequence derived from alignment at CM002472.1:433700..434783+ (Nannochloropsis gaditana)
ATGGAAAACAAGCCGTTGGTTGGAAGATGCGTGATTTGGCCTGGAGGAAT
GTGTGTGGGTGGAAACTGTGGGGGGATTTCGAGATCCTTGCCTCTGTTTT
GGTGCGGGCGacctcccgtccccctttgTCAGGACTGCCATGCCAAATGG
TTTAAGCTCCAGCCATCCTGTTTCTGCTTTATACTGCCTCTTACACCCTC
TCTCACAACATTTACAATTCATTCGTTCAATATTGTTGTCAGGCATTCTC
CGCAACTAGGCAAGTGTAGAAGGCACAATGCAATGTTGAGATTTGTGCCT
TCTCATACAACAAATAGTCAAGTTCGCGTCGCACTTAACAACAGCTTTAG
AACAAACCGGCTCATTTTAGGGTCCACTTGCCTGTCATTGTCCTCTCGAA
CTCCTTCAGCATCTCTCAAGACTAtggctccctccatcctggccCTCGCA
GCGTCGGCCGGGAGCAATGTATTGGGGAATGAGAGGACCTTGCAGAAATT
GCAGGGCGCCCAGCTTTTCGTGGGAAGCGGGGTGGCTTTCCTCTGGTCCA
TGCGTCGATGGCAGGTAAAGAAAGTAGACATCtcagagggcaggaggagg
ttgcaggggaagcgaggaggatggagtgaaggggaaggaaggagagatgc
TGAGCGGTCTTGCGGGCATGATAGCTGATGTGTGAGGTGCAGAAGATTGA
GACAACAATATATGACGACTAATATTTTCTGGACGGAGGCATGAACTCGC
GTGTAAATCTCGCGTGACTGCGATAGACAAGCCGGTCGTGCTTTCCAACG
ATTCCCACGTCCATCTTGGCTTACGCGTCCCTACGGTATAGCGACCTGCA
GTCTTGCATTTCAGGCTATCGAGGCACCCTCACGTAGCTTTGTCACACCA
TACCCCCTCTCACACACATATATTTCCTCACTGCATCTTTTCCAGGAATG
GCAGCGAGGGCTTAGCGGGAAGGCTGGGtcgggagggcagggaagggaga
ggaaagagacgaagaagagTGGGATCTACACCCGTACCGGCGACAAGGGG
ACCTCGTCCCTCTACAATGGCGAggtaaagggag
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Coding sequence (CDS) from alignment at CM002472.1:433700..434783+

>rna7634 ID=rna7634|Name=rna7634|organism=Nannochloropsis gaditana|type=CDS|length=678bp|location=Sequence derived from alignment at CM002472.1:433700..434783+ (Nannochloropsis gaditana)
ATGGAAAACAAGCCGTTGGTTGGAAGATGCGTGATTTGGCCTGGAGGAAT
GTGTGTGGGTGGAAACTGTGGGGGGATTTCGAGATCCTTGCCTCTGTTTT
GGTGCGGGCGacctcccgtccccctttgTCAGGACTGCCATGCCAAATGG
TTTAAGCTCCAGCCATCCTGTTTCTGCTTTATACTGCCTCTTACACCCTC
TCTCACAACATTTACAATTCATTCGTTCAATATTGTTGTCAGGCATTCTC
CGCAACTAGGCAAGTGTAGAAGGCACAATGCAATGTTGAGATTTGTGCCT
TCTCATACAACAAATAGTCAAGTTCGCGTCGCACTTAACAACAGCTTTAG
AACAAACCGGCTCATTTTAGGGTCCACTTGCCTGTCATTGTCCTCTCGAA
CTCCTTCAGCATCTCTCAAGACTAtggctccctccatcctggccCTCGCA
GCGTCGGCCGGGAGCAATGTATTGGGGAATGAGAGGACCTTGCAGAAATT
GCAGGGCGCCCAGCTTTTCGTGGGAAGCGGGGTGGCTTTCCTCTGGTCCA
TGCGTCGATGGCAGGTAAAGAAAGTAGACATCtcagagggcaggaggagg
ttgcaggggaagcgaggaggatggagtgaaggggaaggaaggagagatgc
TGAGCGGTCTTGCGGGCATGATAGCTGA
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Synonyms
Publications