rna7632, rna7632 (mRNA) Nannochloropsis gaditana

Overview
Namerna7632
Unique Namerna7632
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length635
Alignment locationCM002472.1:430038..430831 +

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100847g1.9573.mrna
Orig protein idgnl|cribi|Naga_100847g1.9573
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:430038..430831 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100847g1gene7391Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7632rna7632-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23059.1cds7612Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7632 ID=rna7632|Name=rna7632|organism=Nannochloropsis gaditana|type=mRNA|length=635bp
ACGGACTACCTCCCAGCGCATGCGCCGGACGGGATGGCCGCCCCTCCCTC
CTCCCCGTACCCTCCGCGAGCCTTCTTGGATGACGCGCCCCACGACGATC
CCTCCCACCCGACCCAGCACCAGCATCCCTACCCAACCCCTCCCCACCAT
TCCCAGCCCGCCACGGCAGGAGAATGGAGGGGAGCCGGAGGAAGGGAGGG
AGGGCGGGGGGGAGGCTCGTCGGGCTTTCGGCCCGTCTACCGAGTGGCAG
CTCCCCCTCTGCTCGACGGTCCATCCCTGCCGGGGCCGTCGCGGCCCCAA
ACCCGGGAACATTTGAACCCAAATTCAAATTTAAATTCAAATATGGATTT
CCGACCTCGGGCCAACTCCCACTCGTCCGTCTCCTCCATTGGCAGCACCT
CCTCCGAACCTTCCTTTCCCGTCACGCCCTACCTGGCACCCTTCCCGGCT
CATCACCCGTCGAACGCCCCGAGTGCCTCGTGGCGTCAGGAGGCACAGGG
GCTGGTCCCAATGGAACGGGAGGGAAAGCTGTCGCAGCCGTTACGGGCGC
GGGAAAGCGACGGAAGGATGGAGCAGGCACTGGAAGCGGCTCCGCCTCCG
CATGCCCTTCCTTCCAATGGGGTCACCCACCCGCC
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protein sequence of rna7632

>rna7632-protein ID=rna7632-protein|Name=rna7632|organism=Nannochloropsis gaditana|type=polypeptide|length=178bp
MEKRARGRAAEENARKTKKNSWLPPSNSCKTRICPRSGHESRSSAGGSST
SSSRTTEDEGEKEMGRGQGLEGASLCQAGSEESPLKRRRGSVPGLGQAHQ
SISDLSAVTSISAATFASSVPKTSITPMSSVVYPESPDKAAGNGLYPGRS
QPFVALPSPVPPFRGTAGPEPMVEVTGL
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mRNA from alignment at CM002472.1:430038..430831+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7632 ID=rna7632|Name=rna7632|organism=Nannochloropsis gaditana|type=mRNA|length=794bp|location=Sequence derived from alignment at CM002472.1:430038..430831+ (Nannochloropsis gaditana)
atggagaagagggcgagagggagggcggcggaggaaaacgcAAGAAAAAC
GAAGAAAAACTCGTGGCTTCCGCCCTCCAACAGTTGCAAGACACGAATCT
GCCCACGGTCCGGGTACCGTCGGAGGtagaggcggagacggagggggcgg
ggccgccTTCGAAAAGAACCCGCACGGGGAGCCACGAGAGCAGGAGTAGT
GCCGGCGGGAGCAGCACGAGCAGCAGCCGGACGacggaagacgaagggga
gaaggagatgggcagagggcaaggacTGGAAGGGGCGAGTCTCTGCcagg
cggggtcggaggagagTCCTCTGAAGCGACGGCGTGGGAGTGTGCCCGGG
CTGGGCCAAGCGCATCAAAGTATCTCGGACCTCTCTGCGGTTACCTCGAT
TTCGGCGGCGACGTTTGCGTCCTCTGTCCCCAAGGTTAGAAAGCAAAAAT
GGGCCGAATAATGCCGACGGATTGGGGCATTGTGGGGGAAGTCACGAATG
TTTTTGGGACTCTTCGGTGTTTTGTCGGGTTTTCTTATTGGGCTCACAAG
TGCACacgcaccctccttctttgttAACACCGGTTGTTGATCCCTCCTAC
GCTTCTGTTCCTTCCCTACCCAGACGTCGATCACACCCATGTCCTCCGTG
GTGTACCCAGAAAGCCCCGACAAAGCGGCCGGGAACGGGCTTTACCCAGG
AAGGAGCCAGCCCTTCgtggcccttccctcccccgtccctcccttccggg
GGACGGCGGGGCCGGAGCCCATGGTAGAGGTGACGGGTTTGTAG
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Coding sequence (CDS) from alignment at CM002472.1:430038..430831+

>rna7632 ID=rna7632|Name=rna7632|organism=Nannochloropsis gaditana|type=CDS|length=1611bp|location=Sequence derived from alignment at CM002472.1:430038..430831+ (Nannochloropsis gaditana)
atggagaagagggcgagagggagggcggcggaggaaaacgcAAGAAAAAC
GAAGAAAAACTCGTGGCTTCCGCCCTCCAACAGTTGCAAGACACGAATCT
GCCCACGGTCCGGCCACGAGAGCAGGAGTAGTGCCGGCGGGAGCAGCACG
AGCAGCAGCCGGACGacggaagacgaaggggagaaggagatgggcagagg
gcaaggacTGGAAGGGGCGAGTCTCTGCcaggcggggtcggaggagagTC
CTCTGAAGCGACGGCGTGGGAGTGTGCCCGGGCTGGGCCAAGCGCATCAA
AGTATCTCGGACCTCTCTGCGGTTACCTCGATTTCGGCGGCGACGTTTGC
GTCCTCTGTCCCCAAGACGTCGATCACACCCATGTCCTCCGTGGTGTACC
CAGAAAGCCCCGACAAAGCGGCCGGGAACGGGCTTTACCCAGGAAGGAGC
CAGCCCTTCgtggcccttccctcccccgtccctcccttccgggGGACGGC
GGGGCCGGAGCCCATGGTAGAGGTGACGGGTTTGTAGatggagaagaggg
cgagagggagggcggcggaggaaaacgcAAGAAAAACGAAGAAAAACTCG
TGGCTTCCGCCCTCCAACAGTTGCAAGACACGAATCTGCCCACGGTCCGG
CCACGAGAGCAGGAGTAGTGCCGGCGGGAGCAGCACGAGCAGCAGCCGGA
CGacggaagacgaaggggagaaggagatgggcagagggcaaggacTGGAA
GGGGCGAGTCTCTGCcaggcggggtcggaggagagTCCTCTGAAGCGACG
GCGTGGGAGTGTGCCCGGGCTGGGCCAAGCGCATCAAAGTATCTCGGACC
TCTCTGCGGTTACCTCGATTTCGGCGGCGACGTTTGCGTCCTCTGTCCCC
AAGACGTCGATCACACCCATGTCCTCCGTGGTGTACCCAGAAAGCCCCGA
CAAAGCGGCCGGGAACGGGCTTTACCCAGGAAGGAGCCAGCCCTTCgtgg
cccttccctcccccgtccctcccttccgggGGACGGCGGGGCCGGAGCCC
ATGGTAGAGGTGACGGGTTTGTAGatggagaagagggcgagagggagggc
ggcggaggaaaacgcAAGAAAAACGAAGAAAAACTCGTGGCTTCCGCCCT
CCAACAGTTGCAAGACACGAATCTGCCCACGGTCCGGCCACGAGAGCAGG
AGTAGTGCCGGCGGGAGCAGCACGAGCAGCAGCCGGACGacggaagacga
aggggagaaggagatgggcagagggcaaggacTGGAAGGGGCGAGTCTCT
GCcaggcggggtcggaggagagTCCTCTGAAGCGACGGCGTGGGAGTGTG
CCCGGGCTGGGCCAAGCGCATCAAAGTATCTCGGACCTCTCTGCGGTTAC
CTCGATTTCGGCGGCGACGTTTGCGTCCTCTGTCCCCAAGACGTCGATCA
CACCCATGTCCTCCGTGGTGTACCCAGAAAGCCCCGACAAAGCGGCCGGG
AACGGGCTTTACCCAGGAAGGAGCCAGCCCTTCgtggcccttccctcccc
cgtccctcccttccgggGGACGGCGGGGCCGGAGCCCATGGTAGAGGTGA
CGGGTTTGTAG
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Synonyms
Publications