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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101387g1.10714.mrna |
| Orig protein id | gnl|cribi|Naga_101387g1.10714 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:419895..421054 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7628 ID=rna7628|Name=rna7628|organism=Nannochloropsis gaditana|type=mRNA|length=1251bp
CGTTGCTAGGATAACTTTGTTTTGTGGTTAGTTTTGTACACCGTGGTCGT
CGGTAGAATGGAAATCAAAAGAGGCCTTTGGACGCAAGCCTTTATCATAG
GGTAACTGGTCCTACTAGGTCCTATCACACATGATGCGATGCTCTTGGCA
AACTTCAAGCATTGCCCCGTCGTCCACTTCTCCTCGCTTGGATAAAACTG
AGTCTGCTTCGATGCATGTCCGCCTTAATCAAGAAGTAATGTCTTGTGAG
ACGAAGCTCTGAGACATAAAACTAAAAAATGGAAATACCACTCAGACACT
CTCAACACATACGTCACCGTTTCTTACGGCCCACCAGTGACCTCCTGCTT
TTTGATATACTGGAAAATTCTGAACACATTTCAATAATTGTATGCGAATA
ATTGCGTTGCCTAGTCATAAATTGGTACAACAAGTCGACTGTGTCTGGAT
CAAAAGGAGCAATGCTGCAATTTAGGATTCAATGTTCCTCCCGGTACAGT
CCCCTCTTTTTGAAGCTCATCGCAATACGAGTCAACCCATTCTCTAAGGT
TTAGAGGAGTTTGAAGCTCATCGCAATACGAGTCAACCCATTCTCTAAGG
TTAGAGGAGTAAGTCGAAGATACGGGACGCAGATTATAAGTTCATCTCAC
ATGTGCCTCAACTTCTTTTTTCCGGTCTCCTTTGCGCTTACCATTCTCTG
CTTTGTGTCAACAGGCTGCATGCCTCCCTCCCTCCACCTCCTTGCCTTTT
CCAAAGACCGCTCTTTCCAATGCCGCACCCTCCTGCATTCCCTGGACACC
TATTTGTCACCACCGCCCGCTAGTCTCACGGTTCTATATACCGTGTCCTC
CCCTACGTTCCTGAAAGGCTATCAAGACCTTGAGAGGATGCGGCAGCGCG
GCGACCACCCAGGCGGAAAAGCTGCCCACAAGGAGGACGAAGGCGTTCCT
GGCCCGACGAAGTCATCCCTCGACGACGGCTCTGAACAATCGAGTACATG
CATTCCCACCACATTCCTACACGAGGACGAAGCTGGAGGCTTCTCCACGG
CCCTGGCGATGGTGCTGGGACAATGGAGGGAAAGCCACCGGAAGGGAAGG
AAGGACAAGCAGCGACGCGGGAGGGAGGGAGGGGCAGGAGAGGAAGAAAG
GGAGGAAGAAGCCTGTGTCATGTGGCTGGTCGACGACCTCCTCTTCCATG
CCCCGCTCGACGCGACTCCATTCCTCGCCCTCCTCACGCGGGGACGGGAG
G back to topprotein sequence of rna7628 >rna7628-protein ID=rna7628-protein|Name=rna7628|organism=Nannochloropsis gaditana|type=polypeptide|length=213bp
MSLSSLEPPPSLCLFPFVLNFPPVRDYELWLRLSYPPALSPALPPALLSV
LPTPVIYLRRHEESQSQRQRSTQKVAANAAVRRAMGNLLGREVAVSAVTA
LRDPEGVATSLTLLTEACDLLLTLYKAFLGSLEMQALNSVSVVAEDRRKG
RRVVDMMGWEGRQKEERRVGCLQVKSDVCARLQELAVLSIGRNGPKGLPL
LMKAREAMQSLNK back to topmRNA from alignment at CM002472.1:419895..421054+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7628 ID=rna7628|Name=rna7628|organism=Nannochloropsis gaditana|type=mRNA|length=1160bp|location=Sequence derived from alignment at CM002472.1:419895..421054+ (Nannochloropsis gaditana)
gacgagcttCTGAAGTACGACCCGGCAGCTGAATGCGCAGAGtatgtagg
gagggagggggataaGGCAAccgatggaaaggaaagggaacaGCAAAGGA
GAccgaaaggggggggaggaagcgaaggagggagggagggaggaacgatC
GCCGGTGCTTGATGATAGCCAGGAGAGGATTCTatgtctctttcctcctt
agagccccctccttccctatgccttttccccttcgttCTCAACTTTCCCC
CTGTCAGGGATTACGAGCTATGGCTTCGACTTTCCtatccccccgccctc
tctcccgccctccctcccgccctgctctccgtcctccccacgcccGTCAT
CTACCTCCGACGGCACGAGGAGAGTCAATCCCAGAGACAGAGGAGCACGC
AGAAAGTGGCAGCGAATGCGGCGGTGCGGCGGGCGATGGGTAACCTGCtc
gggcgggaaggtggggaaggagggaggaaggagggagggagggagggagg
gagggaggactaTAACAGAGTTGAAGCCTCGTTCAAGTCTGGCAGTCGGT
GAGGGGCAAGCAATGTTCTTTGACTTACAACGGTCCCGCGCGATTTGAAA
CGGTTGTCACATATCCTATAACGGTTTACAAATTTTACaacttcctttcc
ttccagtGGCAGTATCGGCGGTCACGGCGCTTCGTGACCCGGAGGGTGTC
GCGACATCCTTAACCCTCCTCACAGAGGCGTGTGATTTGCTGCTCACGCT
CTATAAGGCGTTTCTAGGCTCTCTTGAGATGCAAGCGTTGAACTCCGTGT
CCGTGGTTGCGGAAGATAGACgaaaggggcggagggtggtggacatgatg
ggatgggaaggacgccaaaaggaagagcggagggtgggatgtTTACAGGT
GAAGAGCGACGTATGTGCACGACTGCAGGAATTGGCTGTTTTGAGCATTG
GACGGAACGGTCCGAAAGGCTTACCTTTGTTGATGAAGGCGCGGGAAGCT
ATGCAAAGCTTAAACAAATAATGTCCTCGGAGGAATGTAATTCTTTTTGG
AATAATAATGCAAGAAGAACGTGTTGGAATTTTGCGAACAAGTTTGCCCG
AATGCAGAAGAAAGCGTCTGTAATGATCCCAAGGTCGTTTTTTATAAGCA
ATTTTTCGGT back to topCoding sequence (CDS) from alignment at CM002472.1:419895..421054+ >rna7628 ID=rna7628|Name=rna7628|organism=Nannochloropsis gaditana|type=CDS|length=1284bp|location=Sequence derived from alignment at CM002472.1:419895..421054+ (Nannochloropsis gaditana)
atgtctctttcctccttagagccccctccttccctatgccttttcccctt
cgttCTCAACTTTCCCCCTGTCAGGGATTACGAGCTATGGCTTCGACTTT
CCtatccccccgccctctctcccgccctccctcccgccctgctctccgtc
ctccccacgcccGTCATCTACCTCCGACGGCACGAGGAGAGTCAATCCCA
GAGACAGAGGAGCACGCAGAAAGTGGCAGCGAATGCGGCGGTGCGGCGGG
CGATGGGTAACCTGCtcgggcgggaagtGGCAGTATCGGCGGTCACGGCG
CTTCGTGACCCGGAGGGTGTCGCGACATCCTTAACCCTCCTCACAGAGGC
GTGTGATTTGCTGCTCACGCTCTATAAGGCGTTTCTAGGCTCTCTTGAGA
TGCAAGCGTTGAACTCCGTGTCCGTGGTTGCGGAAGATAGACgaaagggg
cggagggtggtggacatgatgggatgggaaggacgccaaaaggaagagcg
gagggtgggatgtTTACAGGTGAAGAGCGACGTATGTGCACGACTGCAGG
AATTGGCTGTTTTGAGCATTGGACGGAACGGTCCGAAAGGCTTACCTTTG
TTGATGAAGGCGCGGGAAGCTATGCAAAGCTTAAACAAATAAatgtctct
ttcctccttagagccccctccttccctatgccttttccccttcgttCTCA
ACTTTCCCCCTGTCAGGGATTACGAGCTATGGCTTCGACTTTCCtatccc
cccgccctctctcccgccctccctcccgccctgctctccgtcctccccac
gcccGTCATCTACCTCCGACGGCACGAGGAGAGTCAATCCCAGAGACAGA
GGAGCACGCAGAAAGTGGCAGCGAATGCGGCGGTGCGGCGGGCGATGGGT
AACCTGCtcgggcgggaagtGGCAGTATCGGCGGTCACGGCGCTTCGTGA
CCCGGAGGGTGTCGCGACATCCTTAACCCTCCTCACAGAGGCGTGTGATT
TGCTGCTCACGCTCTATAAGGCGTTTCTAGGCTCTCTTGAGATGCAAGCG
TTGAACTCCGTGTCCGTGGTTGCGGAAGATAGACgaaaggggcggagggt
ggtggacatgatgggatgggaaggacgccaaaaggaagagcggagggtgg
gatgtTTACAGGTGAAGAGCGACGTATGTGCACGACTGCAGGAATTGGCT
GTTTTGAGCATTGGACGGAACGGTCCGAAAGGCTTACCTTTGTTGATGAA
GGCGCGGGAAGCTATGCAAAGCTTAAACAAATAA back to top
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