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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100772g5.9919.mrna |
| Orig protein id | gnl|cribi|Naga_100772g5.9919 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:408941..410262 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7623 ID=rna7623|Name=rna7623|organism=Nannochloropsis gaditana|type=mRNA|length=842bp
TTTAATATTTATGACTCGTTTGAGTACCGCCCAGTAACGGCATGGACGCA
AACAACATGGGTGAAACCACATAGTGGCGGTTGCGGGCACTGATTGTCAG
CTTTATACGTTTGTTTACCTTTTTACTTGTGCCCCACCTGTCTCACAGAC
CCTCAGGATTCTCGGTGTCTTCACATGCTGCTCCTCAATCGGCGTGCCTC
CTCTTCCTCCGCCTCCTCCTCGCTTCCATCCTTATTCTCCAGCCTTTCTG
CCCATCTTCTCCTTGCGGCCCTCATCTCCCTCCTTCTGACGGTTTCCACC
GCGACCATCCTCCCCTCCTCCCCCTCCCCCTCCCGGCACCACGCCAGCAG
CAGCCTGCGCGTCGGCCCCACTGTCTGGCGCTCTCCTGCCCTTTCCTCCT
CTTTAGCCTCAAGGCAACCTTCTTCTCTGGCCATGACGGGCGCCCGGAGA
GGAAACTACGTGCGTCACGGGCGATGCGCGGCCCAGATGGGTGAGTGTTT
TCGAAGATGTCAAGGGGGTTTTGGAAGGCCACGATGACGGGAGACAATGG
CACACGAAAAGGGACGAAGACAACCGCGACGAAGACAGGCTCGGGTCGGA
CGGTTGACGAAGAAAAGATGCGTGGACGGCGGAGAGAAAAATCACTCGGG
CATAGGGCATGACCAGCAAAGGCGCCTCGAGCCCTCTCTGATCCCCTCCC
TCCCTCCCTCTCTCCGTTTGCCCCGTTGCCAGGCGGCGGGGTCGTTGGGG
AAACCTTTTTTGGCGGGCTGCACAACTTCCTCTCCATCTATAATGTCGTC
TTGACGGGACGGATCCTTCTCTCCTGGTTCCCGCAGGTGGGA back to topprotein sequence of rna7623 >rna7623-protein ID=rna7623-protein|Name=rna7623|organism=Nannochloropsis gaditana|type=polypeptide|length=321bp
MDDCCHGGSGFTFNHHQSCAPQSRQRHASTSVAKLPPHRLRRPSSSPPSS
SSPSPSPSAPPSTLPKSFLRRATSQPPPPSRLLPPAALIPPQTPPLNPLS
RHSSPLPPSFLPSLSPARPPSHPPFSRRSHSLEAEVGLSDGVDLCGDAHD
PPLSHPTLPPSLSSSASTASSSSFSAALFSSSSSASSAASSSSSSSSSWS
SPARRLAKTGGREGGGERGREGGMEGGPKTMATGSPLSLHVLLEWGGEGR
PLVSEEAEKRGGSMSYGMTLLVSPPRKGRTPSLLGPEAYGSSEEMVHGTA
EGGAAETGTAGGVEEREEGRK back to topmRNA from alignment at CM002472.1:408941..410262+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7623 ID=rna7623|Name=rna7623|organism=Nannochloropsis gaditana|type=mRNA|length=1322bp|location=Sequence derived from alignment at CM002472.1:408941..410262+ (Nannochloropsis gaditana)
ATGGACGACTGCTGCCACGGCGGCAGCGGATTCACCTTTAACCACCATCA
GTCCTGCGCTCCTCAGAGCAGGCAACGTCATGCCAGCACCTCGGTGGCCa
agctccctccccatcgcctAAGGcggccctcctcttcccccccctcctcc
tcctccccctccccctcgccctccgccccgccttccacccTGCCTAAGTC
CTTCCTGCGTCGGGCCACCTCCcagcccccacctccctcccgcctcctcc
ctcctgctgcccTCATCCCCCCACAAACCCCACCCCTCAACCCCTTGTCC
CGCCACTCtagtcccctccctccctccttccttccctccctctctccagc
ccgcccgccctcccacccgcccttctcccgccGCTCCCATtctttggagg
cggaggtgggctTGAGCGATGGCGTGGATTTGTGCGGGGACGCCCACGAc
ccgcctctttcccaccctaccctccctccctccctttcttcctctgcgtc
tactgcctcttcctcctccttctcagcggcgcttttttcctcctcctcct
ccgcttcctccgccgcttcctcctcctcctcctcctcctcctcctggtcc
tccccgGCCCGACGCTTGGcgaagacgggagggagggagggaggggggga
gagagggagggagggcgggatggagggcgggcccaAGACGATGGCGACCG
GGAGCCCTCTTTCCTTGCATGTTCTGCtggagtggggaggggaagggcgg
ccaTTGGTgtcagaggaggcggagaaaaggggaggaagcatgaGTTACGG
CATgaccctccttgtctccccgccgaggaagggacgaacaccctccctct
tggggCCCGAGgtaaggggggaagggagggagggagggagggggggagga
ggaaggaagaagacaggcGCGTGCCACGCTTCTGTGATGCCTCTCCACGC
TCACCGTGTCCGActgatgggagggaggggcccgcTACGGATTGTTCCAG
GCCGTTCTAGAAGGTGCCCGTGTGgcgtttttcctcctcccccttggtTT
GTGGGCTGGCGCCGagtgtttctcgtcccccgcccccccgttGCTTCCTC
TGTGACTCTTGTGTATTCTGACCCTCCGCTTGGCATGGGATACGGCGTGT
TGGCGTCGGGTTGTTCTAAACCGTGAGTATTTCTAATGTCTatgtttttt
tcttcttcgggATACAGGCCTACGGATCGTCCGAGGAGATGGTGCACGGT
ACCGCCGAGGGGGGCGCCGCCGAGACGGGAACGGCGGGTggggtggaaga
gagggaggaggggaggaagtga back to topCoding sequence (CDS) from alignment at CM002472.1:408941..410262+ >rna7623 ID=rna7623|Name=rna7623|organism=Nannochloropsis gaditana|type=CDS|length=1932bp|location=Sequence derived from alignment at CM002472.1:408941..410262+ (Nannochloropsis gaditana)
ATGGACGACTGCTGCCACGGCGGCAGCGGATTCACCTTTAACCACCATCA
GTCCTGCGCTCCTCAGAGCAGGCAACGTCATGCCAGCACCTCGGTGGCCa
agctccctccccatcgcctAAGGcggccctcctcttcccccccctcctcc
tcctccccctccccctcgccctccgccccgccttccacccTGCCTAAGTC
CTTCCTGCGTCGGGCCACCTCCcagcccccacctccctcccgcctcctcc
ctcctgctgcccTCATCCCCCCACAAACCCCACCCCTCAACCCCTTGTCC
CGCCACTCtagtcccctccctccctccttccttccctccctctctccagc
ccgcccgccctcccacccgcccttctcccgccGCTCCCATtctttggagg
cggaggtgggctTGAGCGATGGCGTGGATTTGTGCGGGGACGCCCACGAc
ccgcctctttcccaccctaccctccctccctccctttcttcctctgcgtc
tactgcctcttcctcctccttctcagcggcgcttttttcctcctcctcct
ccgcttcctccgccgcttcctcctcctcctcctcctcctcctcctggtcc
tccccgGCCCGACGCTTGGcgaagacgggagggagggagggaggggggga
gagagggagggagggcgggatggagggcgggcccaAGACGATGGCGACCG
GGAGCCCTCTTTCCTTGCATGTTCTGCtggagtggggaggggaagggcgg
ccaTTGGTgtcagaggaggcggagaaaaggggaggaagcatgaGTTACGG
CATgaccctccttgtctccccgccgaggaagggacgaacaccctccctct
tggggCCCGAGGCCTACGGATCGTCCGAGGAGATGGTGCACGGTACCGCC
GAGGGGGGCGCCGCCGAGACGGGAACGGCGGGTggggtggaagagaggga
ggaggggaggaagtgaATGGACGACTGCTGCCACGGCGGCAGCGGATTCA
CCTTTAACCACCATCAGTCCTGCGCTCCTCAGAGCAGGCAACGTCATGCC
AGCACCTCGGTGGCCaagctccctccccatcgcctAAGGcggccctcctc
ttcccccccctcctcctcctccccctccccctcgccctccgccccgcctt
ccacccTGCCTAAGTCCTTCCTGCGTCGGGCCACCTCCcagcccccacct
ccctcccgcctcctccctcctgctgcccTCATCCCCCCACAAACCCCACC
CCTCAACCCCTTGTCCCGCCACTCtagtcccctccctccctccttccttc
cctccctctctccagcccgcccgccctcccacccgcccttctcccgccGC
TCCCATtctttggaggcggaggtgggctTGAGCGATGGCGTGGATTTGTG
CGGGGACGCCCACGAcccgcctctttcccaccctaccctccctccctccc
tttcttcctctgcgtctactgcctcttcctcctccttctcagcggcgctt
ttttcctcctcctcctccgcttcctccgccgcttcctcctcctcctcctc
ctcctcctcctggtcctccccgGCCCGACGCTTGGcgaagacgggaggga
gggagggagggggggagagagggagggagggcgggatggagggcgggccc
aAGACGATGGCGACCGGGAGCCCTCTTTCCTTGCATGTTCTGCtggagtg
gggaggggaagggcggccaTTGGTgtcagaggaggcggagaaaaggggag
gaagcatgaGTTACGGCATgaccctccttgtctccccgccgaggaaggga
cgaacaccctccctcttggggCCCGAGGCCTACGGATCGTCCGAGGAGAT
GGTGCACGGTACCGCCGAGGGGGGCGCCGCCGAGACGGGAACGGCGGGTg
gggtggaagagagggaggaggggaggaagtga back to top
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