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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101348g2.2369.mrna |
| Orig protein id | gnl|cribi|Naga_101348g2.2369 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:375639..376707 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7612 ID=rna7612|Name=rna7612|organism=Nannochloropsis gaditana|type=mRNA|length=1301bp
GGCTTGTCTCAGATGTCTCGCCAACTGTCGCTCGATAGGATATGAAGCAC
GTAATAATGCATCCCACCAAATTGAATAAGCCAAGCGAGCAGCAGCCCCC
CGTTCTCGGCACAGAAATTTATGGTGGACGGTATGCTACGTTGCGCGGCA
GTGTGCAATATGCTTGCACAGTTGTATGCGACCTCACCACACAACAAAAC
AGGGAGGTATGCTGCATGGTGGGTGTTACCTTTCAATGGGGGGAGATTGA
ACATGGAAAATTTCTCTGACATTTTCATGTTTGTGTGTCACTGCGACCGT
GTCCATCCTAGCACACGTGATAAAATTAACCCTCCCTACATTTGCTTGTT
TTTTCTGGATGGATATTTCACCCCTCCATGTCATGTTATCAAGCGCCTCT
CTTCCGTATCCTATTATGCTTATTGAACAACCGCCATGACAATTTTATTC
TCTCCCCTCCACCCGGACAGGCTGGGTGTAAGGGCGTGCATGTCTTTCAT
GGCATGGTAAACGCCCCGTTCCCCCTCATTTTCCACCCTCTGTGCGTGCT
CCCCTCCCCTAGGGTAATCCTGCTGGTCAAGTCGGTGCTGCTTGCGTCCT
CGGTGGCTCTTGCGCCGTCCTCGCCCTCTTTCTCCTTCCTCCCTCCCCCT
CTCCCCATACCACGCAGCATGTGGCTGCGCAGTCACCGGCAGCAGTTGAC
AGAAGGGGCGATACGCGGAGGGTTATACGGAATCTCCCCCTTGCCCTCTT
TGGCGTGTCCTCAGGGGGGAGTGCAGGCGTGGAAGGGATGTGCCTCCACA
CTCATCACCGCCGCGCTTCGGATTGCAGGGGAGGGGAAGGAGGAAGTGAA
GGCGGAGGAGGCGGCCACGGCCCTCCCTCGCTCCGCAGCGCTTCTTCCAG
AAGGGGAGGAAAACGTCCTTGCCCAGGAAGTGCAGCATGTGATGGGGCCG
GAGGGACATACAAGCCGGAGAAAGCGGGGTCCCGGGCGGAAAACTCCGAG
GGAGGAGGTTACCTCCTCTACTTCGTCCCCGCCATCAAGCGTCCTTCCTC
TCGGAGGGGAGGAGACGAGGGCCAGGGAAGGGCCCAGAAGGGAGGTAAGG
AAAGGATCGGAACGAGTGTTAAGGAAGAGGAAACACGAAGAAAAGGCGGG
AGCCCCGCAGGCAGTGAGGGACGAGGGAGGAAGGTACCTCCGCACCCAGA
GGGAGGAGGCGACGGCGATGGAGGACGATGAGTTTGGAAGGCTTGCTGCC
GAGTTAATCCCCGGAACCGGGTCGGACGGAGAGGGAGGGAGAGAGAGAGG
G back to topprotein sequence of rna7612 >rna7612-protein ID=rna7612-protein|Name=rna7612|organism=Nannochloropsis gaditana|type=polypeptide|length=355bp
MRVGGFIDGACMAGMPRGAVCVALPSLLYLPSSSPSSPQQVIPVCAPRAI
ATSRERQARTRVPTHLIAKAPPLQIFLTGVARGLWVSPRGALFILSLVVV
GLAFTSRLQPSLVGAHARSSSLLTQGGRSTAKVGMKGGGGRVMAVRAVSR
HGGRGGGRGGGREGRREGGQTLWRTMSAFAGGWGRQGGKSLVPLYGPRGK
PLAAGTGYSFPSPYVRCPLWAFPSQEKSSLAYEGGEGGWRDADTPIIRNS
RLSAALHASTSTSTSTSTSTSTSAPPSPPPSETALPPAPPRPSEPSIPAS
SSSSPSLRRDGEGVEDSYAWVGYGGSAPVKPMGGPAQGELRWGRIVGGKR
RGRGE back to topmRNA from alignment at CM002472.1:375639..376707+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7612 ID=rna7612|Name=rna7612|organism=Nannochloropsis gaditana|type=mRNA|length=1069bp|location=Sequence derived from alignment at CM002472.1:375639..376707+ (Nannochloropsis gaditana)
CATGCGTGTAGGAGGCTTTATTGACGGTGCATGCATGGCCGGCATGCCCC
GCGGTGCGGTGTGTGTCGCTTTGCCTTCGTTGTTAtacctcccttcttcc
tccccttcctcgcctcaaCAGGTCATCCCAGTCTGTGCCCCGAGAGCTAT
AGCTACTTCCAGAGAGAGACAAGCACGCACCCGCGTGCCCACCCATCTCA
TTGCCAAAGCTCCGCCACTCCAAATTTTCCTCACGGGTGTGGCGCGGGGT
CTTTGGGTGTCGCCTCGGGGGGCCTTATTCATTTTGAGCCTTGTCGTTGT
AGGGCTGGCTTTCACTTCCCGGTTGCAACCCTCCCTTGTCGGAGCCCATG
CTcgctcctccagcttgctAACGCAAGGAGGTCGTTCGACGGCAAAAGTG
GGCAtgaaaggggggggtggaagggtgATGGCGGTCCGTGCCGTGAGCag
gcacggagggagagggggaggaagggggggaggaagggaaggaagaaggg
aaggaggacagacGCTGTGGAGGACAATGTCCGCCTTCGCGGGCGGAtgg
ggaagacaaggaggaaagagcctCGTGCCGTTATACGGGCCAAGAGGGAA
GCCCCTGGCTGCCGGGACCGGCTATTCTTTTCCGTCGCCCTATGTGAGGT
GTCCGCTGTGGGCGTTTCCGAGTCAGGAAAAGTCCAGCCTCGCgtacgaa
ggaggggagggagggtggcgggaCGCAGACACGCCCATCATCCGGAACAG
CCGGTTGAgcgccgccctccacgcctccacctccacctccacctccacct
ccacctccacctccacctcggccccgccctcccccccgccctcggagACC
GCCctacctcccgccccccctcgtccctcgGAGCCGTCTATCCCGgcgtc
ttcgtcttcttctccttcgttgcggagggatggggaaggagtggaggaca
GTTATGCCTGGGTAGGGTACGGGGGATCGGCGCCTGTCAAGCCGATGGGA
GGTCCGGCCCAAGGTGAGTTaaggtgggggaggataGTGGGCGGgaaacg
gaggggaagaggagagtaG back to topCoding sequence (CDS) from alignment at CM002472.1:375639..376707+ >rna7612 ID=rna7612|Name=rna7612|organism=Nannochloropsis gaditana|type=CDS|length=1068bp|location=Sequence derived from alignment at CM002472.1:375639..376707+ (Nannochloropsis gaditana)
ATGCGTGTAGGAGGCTTTATTGACGGTGCATGCATGGCCGGCATGCCCCG
CGGTGCGGTGTGTGTCGCTTTGCCTTCGTTGTTAtacctcccttcttcct
ccccttcctcgcctcaaCAGGTCATCCCAGTCTGTGCCCCGAGAGCTATA
GCTACTTCCAGAGAGAGACAAGCACGCACCCGCGTGCCCACCCATCTCAT
TGCCAAAGCTCCGCCACTCCAAATTTTCCTCACGGGTGTGGCGCGGGGTC
TTTGGGTGTCGCCTCGGGGGGCCTTATTCATTTTGAGCCTTGTCGTTGTA
GGGCTGGCTTTCACTTCCCGGTTGCAACCCTCCCTTGTCGGAGCCCATGC
TcgctcctccagcttgctAACGCAAGGAGGTCGTTCGACGGCAAAAGTGG
GCAtgaaaggggggggtggaagggtgATGGCGGTCCGTGCCGTGAGCagg
cacggagggagagggggaggaagggggggaggaagggaaggaagaaggga
aggaggacagacGCTGTGGAGGACAATGTCCGCCTTCGCGGGCGGAtggg
gaagacaaggaggaaagagcctCGTGCCGTTATACGGGCCAAGAGGGAAG
CCCCTGGCTGCCGGGACCGGCTATTCTTTTCCGTCGCCCTATGTGAGGTG
TCCGCTGTGGGCGTTTCCGAGTCAGGAAAAGTCCAGCCTCGCgtacgaag
gaggggagggagggtggcgggaCGCAGACACGCCCATCATCCGGAACAGC
CGGTTGAgcgccgccctccacgcctccacctccacctccacctccacctc
cacctccacctccacctcggccccgccctcccccccgccctcggagACCG
CCctacctcccgccccccctcgtccctcgGAGCCGTCTATCCCGgcgtct
tcgtcttcttctccttcgttgcggagggatggggaaggagtggaggacaG
TTATGCCTGGGTAGGGTACGGGGGATCGGCGCCTGTCAAGCCGATGGGAG
GTCCGGCCCAAGGTGAGTTaaggtgggggaggataGTGGGCGGgaaacgg
aggggaagaggagagtaG back to top
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