rna7611, rna7611 (mRNA) Nannochloropsis gaditana

Overview
Namerna7611
Unique Namerna7611
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length484
Alignment locationCM002472.1:370687..371987 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101503g1.454.mrna
Orig protein idgnl|cribi|Naga_101503g1.454
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:370687..371987 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101503g1gene7369Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23082.1cds7591Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7611rna7611-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7611 ID=rna7611|Name=rna7611|organism=Nannochloropsis gaditana|type=mRNA|length=484bp
GCTGGAAAAACTGGCCCGGAATCTGACCGTGGCCGACCTCCCGTACTTGG
AGGGGATCATAAAACGGAAGATGTACGACCCCACCTACGTCCCGCTGGTG
AACCAGCCGCATTGAAGAGCGAGCTTGCAACGAGGGGAGCGCCGTTTCGG
ACGCTGCACCCCCGGTTGTTAATTTCCTTTTTCAAACGCGGTGTGTGCCT
CCTCCCGTCGGGGCTTGTCAACGGCCGTGCCGATGATTCTTCCCACCCTC
GACGAGGGGGGAAGCCAAGAAGGAAGGTCCGGACGGGAAGGGGGAGGATC
GTTAGGAGGGAAGGGAGCCGTTAAATTTTGAAAAGGTTAACGGTTGCAAA
CGGTGGGAGGCCGAGGGAGGGGAAAGGACGGAGAACCAAAGGTATGTATG
GATGGCCGAGAGGGCAAAAAAGTCTGGGACTGTGTGCCAGCCGAAGTACG
ACTGATTTGATCCGAAAATTGAATACAAAATTTC
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protein sequence of rna7611

>rna7611-protein ID=rna7611-protein|Name=rna7611|organism=Nannochloropsis gaditana|type=polypeptide|length=308bp
MSCYQAPLFRILLCLLNNRHDNFILSPPPGQAGCKGVHVFHGMVNAPFPL
IFHPLCVLPSPRVILLVKSVLLASSVALAPSSPSFSFLPPPLPIPRSMWL
RSHRQQLTEGAIRGGLYGISPLPSLACPQGGVQAWKGCASTLITAALRIA
GEGKEEVKAEEAATALPRSAALLPEGEENVLAQEVQHVMGPEGHTSRRKR
GPGRKTPREEVTSSTSSPPSSVLPLGGEETRAREGPRREVRKGSERVLRK
RKHEEKAGAPQAVRDEGGRYLRTQREEATAMEDDEFGRLAAELIPGTGSD
GEGGRERG
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mRNA from alignment at CM002472.1:370687..371987-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7611 ID=rna7611|Name=rna7611|organism=Nannochloropsis gaditana|type=mRNA|length=1301bp|location=Sequence derived from alignment at CM002472.1:370687..371987- (Nannochloropsis gaditana)
GGCTTGTCTCAGATGTCTCGCCAACTGTCGCTCGATAGGATATGAAGCAC
GTAATAATGCATCCCACCAAATTGAATAAGCCAAGCGAGCAGCAGCCCCC
CGTTCTCGGCACAGAAATTTATGGTGGACGGTATGCTACGTTGCGCGGCA
GTGTGCAATATGCTTGCACAGTTGTATGCGACCTCACCACACAACAAAAC
AGGGAGGTATGCTGCATGGTGGGTGTTACCTTTCAATGGGGGGAGATTGA
ACATGGAAAATTTCTCTGACATTTTCATGTTTGTGTGTCACTGCGACCGT
GTCCATCCTAGCACACGTGATAAAATTAACCCTCCCTACATTTGCTTGTT
TTTTCTGGATGGATATTTCACCCCTCCATGTCATGTTATCAAGCGCCTCT
CTTCCGTATCCTATTATGCTTATTGAACAACCGCCATGACAATTTTATTC
TCTCCCCTCCACCCGGACAGGCTGGGTGTAAGGGCGTGCATGTCTTTCAT
GGCATGGTAAACGCCCCGTTCCCCCTCATTTTCCACCCTCTGTGCGTGCT
CCCCTCCCCTAGGGTAATCCTGCTGGTCAAGTCGGTGCTGCTTGCGTCCT
CGGTGGCTCTTGCGCCGTCCTCGCCCTCTTTCTCCTTCCTCCCTCCCCCT
CTCCCCATACCACGCAGCATGTGGCTGCGCAGTCACCGGCAGCAGTTGAC
AGAAGGGGCGATACGCGGAGGGTTATACGGAATCTCCCCCTTGCCCTCTT
TGGCGTGTCCTCAGGGGGGAGTGCAGGCGTGGAAGGGATGTGCCTCCACA
CTCATCACCGCCGCGCTTCGGATTGCAGGGGAGGGGAAGGAGGAAGTGAA
GGCGGAGGAGGCGGCCACGGCCCTCCCTCGCTCCGCAGCGCTTCTTCCAG
AAGGGGAGGAAAACGTCCTTGCCCAGGAAGTGCAGCATGTGATGGGGCCG
GAGGGACATACAAGCCGGAGAAAGCGGGGTCCCGGGCGGAAAACTCCGAG
GGAGGAGGTTACCTCCTCTACTTCGTCCCCGCCATCAAGCGTCCTTCCTC
TCGGAGGGGAGGAGACGAGGGCCAGGGAAGGGCCCAGAAGGGAGGTAAGG
AAAGGATCGGAACGAGTGTTAAGGAAGAGGAAACACGAAGAAAAGGCGGG
AGCCCCGCAGGCAGTGAGGGACGAGGGAGGAAGGTACCTCCGCACCCAGA
GGGAGGAGGCGACGGCGATGGAGGACGATGAGTTTGGAAGGCTTGCTGCC
GAGTTAATCCCCGGAACCGGGTCGGACGGAGAGGGAGGGAGAGAGAGAGG
G
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Coding sequence (CDS) from alignment at CM002472.1:370687..371987-

>rna7611 ID=rna7611|Name=rna7611|organism=Nannochloropsis gaditana|type=CDS|length=924bp|location=Sequence derived from alignment at CM002472.1:370687..371987- (Nannochloropsis gaditana)
ATGTCATGTTATCAAGCGCCTCTCTTCCGTATCCTATTATGCTTATTGAA
CAACCGCCATGACAATTTTATTCTCTCCCCTCCACCCGGACAGGCTGGGT
GTAAGGGCGTGCATGTCTTTCATGGCATGGTAAACGCCCCGTTCCCCCTC
ATTTTCCACCCTCTGTGCGTGCTCCCCTCCCCTAGGGTAATCCTGCTGGT
CAAGTCGGTGCTGCTTGCGTCCTCGGTGGCTCTTGCGCCGTCCTCGCCCT
CTTTCTCCTTCCTCCCTCCCCCTCTCCCCATACCACGCAGCATGTGGCTG
CGCAGTCACCGGCAGCAGTTGACAGAAGGGGCGATACGCGGAGGGTTATA
CGGAATCTCCCCCTTGCCCTCTTTGGCGTGTCCTCAGGGGGGAGTGCAGG
CGTGGAAGGGATGTGCCTCCACACTCATCACCGCCGCGCTTCGGATTGCA
GGGGAGGGGAAGGAGGAAGTGAAGGCGGAGGAGGCGGCCACGGCCCTCCC
TCGCTCCGCAGCGCTTCTTCCAGAAGGGGAGGAAAACGTCCTTGCCCAGG
AAGTGCAGCATGTGATGGGGCCGGAGGGACATACAAGCCGGAGAAAGCGG
GGTCCCGGGCGGAAAACTCCGAGGGAGGAGGTTACCTCCTCTACTTCGTC
CCCGCCATCAAGCGTCCTTCCTCTCGGAGGGGAGGAGACGAGGGCCAGGG
AAGGGCCCAGAAGGGAGGTAAGGAAAGGATCGGAACGAGTGTTAAGGAAG
AGGAAACACGAAGAAAAGGCGGGAGCCCCGCAGGCAGTGAGGGACGAGGG
AGGAAGGTACCTCCGCACCCAGAGGGAGGAGGCGACGGCGATGGAGGACG
ATGAGTTTGGAAGGCTTGCTGCCGAGTTAATCCCCGGAACCGGGTCGGAC
GGAGAGGGAGGGAGAGAGAGAGGG
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Synonyms
Publications