rna7610, rna7610 (mRNA) Nannochloropsis gaditana

Overview
Namerna7610
Unique Namerna7610
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length282
Alignment locationCM002472.1:369650..370133 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102312g1.183.mrna
Orig protein idgnl|cribi|Naga_102312g1.183
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:369650..370133 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102312g1gene7368Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7610rna7610-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23083.1cds7590Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7610 ID=rna7610|Name=rna7610|organism=Nannochloropsis gaditana|type=mRNA|length=282bp
ATGTGCGACAAGGACGGCCTCTTGGGCCAAGCGCGCCAGAACCGCTTGAC
CTCGCAACAGCTCGAATTCATGCGTTCCGACCTCCCCGACGGCCTCCCCC
TCCTGGAGGTGGCGAAACGTGTCCGCCCCACGATCCTTCTCGGTCTGAGC
GCCCAGCGTGGCTTGTTCAAGGAGGAACTGGTGAGGGAAATCGCGCGGCA
CACCCCGCGTCCTTTTGTCTTCCCCCTCTCCAACCCCACCACCTCCGCGG
AATGCACGCCCTCGGAGGCCTACTTCCCGTGA
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protein sequence of rna7610

>rna7610-protein ID=rna7610-protein|Name=rna7610|organism=Nannochloropsis gaditana|type=polypeptide|length=107bp
AGKTGPESDRGRPPVLGGDHKTEDVRPHLRPAGEPAALKSELATRGAPFR
TLHPRLLISFFKRGVCLLPSGLVNGRADDSSHPRRGGKPRRKVRTGRGRI
VRREGSR
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mRNA from alignment at CM002472.1:369650..370133+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7610 ID=rna7610|Name=rna7610|organism=Nannochloropsis gaditana|type=mRNA|length=484bp|location=Sequence derived from alignment at CM002472.1:369650..370133+ (Nannochloropsis gaditana)
GCTGGAAAAACTGGCCCGGAATCTGACCGTGGCCGACCTCCCGTACTTGG
AGGGGATCATAAAACGGAAGATGTACGACCCCACCTACGTCCCGCTGGTG
AACCAGCCGCATTGAAGAGCGAGCTTGCAACGAGGGGAGCGCCGTTTCGG
ACGCTGCACCCCCGGTTGTTAatttcctttttcaaacgCGGTGtgtgcct
cctcccgtcgGGGCTTGTCAACGGCCGTGCCGATGattcttcccaccctc
gacgaggggggaagccaagaaggaaggtccggacgggaagggggaggatc
gttaggagggaagggagccgTTAAATTTTGAAAAGGTTAACGGTTGCAAA
CGGTgggaggccgagggaggggaaaggacggagaACCAAAGGTATGTATG
GATGGCCGAGAGGGCAAAAAAGTCTGGGACTGTGTGCCAGCCGAAGTACG
ACTGATTTGATCCGAAAATTGAATACAAAATttc
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Coding sequence (CDS) from alignment at CM002472.1:369650..370133+

>rna7610 ID=rna7610|Name=rna7610|organism=Nannochloropsis gaditana|type=CDS|length=324bp|location=Sequence derived from alignment at CM002472.1:369650..370133+ (Nannochloropsis gaditana)
GCTGGAAAAACTGGCCCGGAATCTGACCGTGGCCGACCTCCCGTACTTGG
AGGGGATCATAAAACGGAAGATGTACGACCCCACCTACGTCCCGCTGGTG
AACCAGCCGCATTGAAGAGCGAGCTTGCAACGAGGGGAGCGCCGTTTCGG
ACGCTGCACCCCCGGTTGTTAatttcctttttcaaacgCGGTGtgtgcct
cctcccgtcgGGGCTTGTCAACGGCCGTGCCGATGattcttcccaccctc
gacgaggggggaagccaagaaggaaggtccggacgggaagggggaggatc
gttaggagggaagggagccgTTAA
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Synonyms
Publications