rna760, rna760 (mRNA) Nannochloropsis gaditana

Overview
Namerna760
Unique Namerna760
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1354
Alignment locationCM002456.1:360603..362298 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100035g24.3390.mrna
Orig protein idgnl|cribi|Naga_100035g24.3390
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:360603..362298 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100035g24gene729Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna760rna760-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29926.1cds760Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna760 ID=rna760|Name=rna760|organism=Nannochloropsis gaditana|type=mRNA|length=1354bp
GACTGCGCGCGCGTCGTGCGGTCCGCGTTAGTATCCGTGCAACCCATGGT
GATCCCTCGCACTGACCCTATCTGACCGGAAACTTATGACTTAAATGACA
CAAAAACCCTTTCGTTTTGTGCTTGAGGATCAGCATCGAGTTGGATGCCG
CTGCCACCAACATCTGAGGAGGACCGCACAAGGTTTCGCTTTTCACGCGG
CATCCACATCTACGCGTCATGAGCTATGCGAACAGCAAAGGCAGCAAGAC
TCCTGCTGGTCCGAATGAGTCATCATCGAATGAAAAGCCTGTTAAAGGCA
AAGGTGGCGCTGCATCCTCGCCCTCGACGTGGGAAGATGAGGACGCGACA
GTGCCCGACATCACTGCCGAGCTCTCCAAGCTATCCTTGGACAAGACTGG
TCAAGCATCGAAGAACAGATTTACTAGAAGGGGTCAAGCAATCGAAAGAT
GGGCCTCGATTCCGACAACACTGCCGGCATCTGAGAGCAAGCCTCCCGGA
CAAAGAGAACAAAGAGAGCATCCCAGAACACCTGTACAACATCGTCATTC
GCCAACAACACAGATATCTTCTCAAGCACAGAAAACAAAGGCGCGGGTAA
CATCATCTCCTACTTTAAGCCGCTACGGGGTCGATTTGGGAAACCTTTCA
GATGTTGTACGCGATCTCCCTGCTACAGACATACTTGCCCATGGCCTTTA
CCTGTCGGGATTCCCTCATACATCCTCAGAGCCAGAGCGGCAAGCGCTGG
TATCTCCATGGACAAAGGTCGGCGCAATGATAATTTGGCTGTCGCCTCGA
AACTCACATGCGGTTGCCATGTTCTACTCCATAGCGACTGCTAATCGTGC
CTTACGCAAAGTCGAGTCTCAGGGGGGCGTAAAAGTGCAGAGCTTGAAAG
ATGCCACGCCATCTGTACAGAGAGAGGCCTTATCAGCTGGACTTACCATT
CCTCCCCGGCCAAAGGGTGATACATCGGTAACGTCCCGTCTTATTATGGG
GGCGCTAGGGGTCCGTTCTCCAAGCAACACCCGCCCTTCAATCGGCAATA
AGCGGGAGGGAGGCGTGCGCCGCTCTGCTAGGATACAAGAGAGACATTTG
CAAGAGGAGCAACGTAGACAGGAGGGACAAGAATATGCAGACGCAAAGTC
AACAGCAACAGCAGAAGATGGGGTGTTAAGAAAAACTGGAGAAAACCAGA
ACGAAAGTGCCAAAAAGTAGATAGATATATCAAAAAACGCAGTAGAGGAG
TGCGCACCAGCTAGAAATTGTGCATAATTTCTTTATTGTGTTTGTCTCCA
TGCGAGGTGGTGTTTCAGTCGCAAAAAGGACAAGAAAAGTAACTCATCTC
GCGT
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protein sequence of rna760

>rna760-protein ID=rna760-protein|Name=rna760|organism=Nannochloropsis gaditana|type=polypeptide|length=134bp
MYALACLRTMRAVALAEEAASRRRARSPGGGYARQGFTFMTPQGQDTQKA
DQAPADERHPMKKSSQFSSFGKVNGTEEEKKDTPLDDPQAHLSQIVEASD
DSKPIFKDTACLKPERIVLRIPPVSSGTSLERRF
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mRNA from alignment at CM002456.1:360603..362298-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna760 ID=rna760|Name=rna760|organism=Nannochloropsis gaditana|type=mRNA|length=1696bp|location=Sequence derived from alignment at CM002456.1:360603..362298- (Nannochloropsis gaditana)
AGGCAACCATCCACATGGACAAGCCCAACCACATCCAAATGGCGCGGCAA
GAGAGCATTCTATGTACGCACTAGCCTGCCTCAGGACCATGCGTGCTGTC
GCCCTCGCCGAAGAGGCCGCCAGCCGCAGGAGGGCCCGCAGCCCGGGTGG
GGGGTACGCTCGACAGGGTTTTACGTTCATGACACCACAGGGACAAGGTG
ACCGTGGAGATACACGTCCTTTCGCGCTAGACCTCCGCGATGACCTTGTC
GATGTCCTTTTTGAGGCCCTGACAACCAGCGATGGAGACTTTCAAACCCG
CCCGTCGTCTTCCCTTCCCCGGTGCCCTCTCACACTTTCATTTTCTAACA
TCTGCCCAGACACCCAGAAAGCAGATCAGGCGCCAGCCGACGAGAGACAT
CCTATGAAGAAGTCCTCGCAGTTCTCGTCATTTGGGAAGGTCAACGGTAC
TGAGGAGGAGAAAAAAGACACTCCTTTGGACGATCCGCAAGCGCACCTCT
CGCAGATCGTTGAGGCCTCCGATGACTCGAAGCCCATCTTCAAAGATACA
GCATGCTTAAGTGAGTATGTTAGAGTTTCAACGCAATCAGAGTCATTTAT
GCTTGGGAGCACAAAAGAAGCATTGATACTCATTCAATTTTGCCCCCCAC
GTTCACTCCGTTAACAGAGCCTGAGCGCATTGTCCTTCGTATACCACCGG
TTTCCTCCGGCACAAGCCTTGAGAGAAGATTTTGATACAAACAAAGTCTC
TACTTTTGGTGGGGGCCTATGTGCATTTTGTTCCATGGTCCACATACGCG
AGTAGAACGTGACATTTTACATATTTTCTTGAGAATTCAGTGTCTCGCTT
GTTTCCTCCTTGGGTACCACCTTGCTGCTTCCCGTGTTCGTAAACATGCT
CACTACGCTGGAAAGCGTCTTGGTCTTCCGCATCGATTTCCGCACAGTCG
CCTTATTGGCAAAACCTTTGCCCTCGCTGTTCACCTGTTCTCTCGTAGTG
CCTGAAAGTCCCCCAATGCCACCTCCTCCTGTGTTCGTCGTGGCTCCCAT
CCGCTTCATTTTTGCCAGCCGTTGTAAATTCTTTTGCGCTTTGACAATGA
ACTGCTCTTGCTTGATTGCCTCCGTTTCTACCAGCTCCATGAATTTCTCG
CTTTCTGCGCTCAAATCCTCGTAGGCTTCTCGAGGAAGGGAGAGCACCTC
GGAATAGACAGCGGCTCGGACGTTGAAGTCGTGATTACCGTCGGTTGTAA
GAGCGACTTGCCCGAACATGTCCCCCCTTTGAAGGTTGCTGTTAAGTGAA
AGGGGACCGGATAAGAAATACTCAACGAATTTGCGACAGCGTGTGCACAT
CTATTTTATAGAACGCTTCGAAAAGGTCCTTATAAGACGGACGAGGAGAG
GCACAGAAGAAGAAACACGGGATGAGGGGAGCTGCAGAATAAGTCACTCA
ATCACACAGTCCCTTCCACCTGCTTACCTGATGACTGTCACGTTATCCAA
TGTTATTTCCAGTTGCCCGTTCTTGACGAAATAGAGAAATTCCCCTTTAT
CTCCTTCCTTGAAGACGTGCTCTCCTGGCATATACATTGTCGATTGCAAA
GTTTGCATCAGACCGATAATCGTGTTCAGTTCCAACTGCTTCAGAAGAGG
GATATTTTTCACAAGTTCTCGGTTAAGGAGAAGGGAGAGACGAAGC
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Coding sequence (CDS) from alignment at CM002456.1:360603..362298-

>rna760 ID=rna760|Name=rna760|organism=Nannochloropsis gaditana|type=CDS|length=1215bp|location=Sequence derived from alignment at CM002456.1:360603..362298- (Nannochloropsis gaditana)
AGCCTGAGCGCATTGTCCTTCGTATACCACCGGTTTCCTCCGGCACAAGC
CTTGAGAGAAGATTTTGAACACCCAGAAAGCAGATCAGGCGCCAGCCGAC
GAGAGACATCCTATGAAGAAGTCCTCGCAGTTCTCGTCATTTGGGAAGGT
CAACGGTACTGAGGAGGAGAAAAAAGACACTCCTTTGGACGATCCGCAAG
CGCACCTCTCGCAGATCGTTGAGGCCTCCGATGACTCGAAGCCCATCTTC
AAAGATACAGCATGCTTAAATGTACGCACTAGCCTGCCTCAGGACCATGC
GTGCTGTCGCCCTCGCCGAAGAGGCCGCCAGCCGCAGGAGGGCCCGCAGC
CCGGGTGGGGGGTACGCTCGACAGGGTTTTACGTTCATGACACCACAGGG
ACAAGAGCCTGAGCGCATTGTCCTTCGTATACCACCGGTTTCCTCCGGCA
CAAGCCTTGAGAGAAGATTTTGAACACCCAGAAAGCAGATCAGGCGCCAG
CCGACGAGAGACATCCTATGAAGAAGTCCTCGCAGTTCTCGTCATTTGGG
AAGGTCAACGGTACTGAGGAGGAGAAAAAAGACACTCCTTTGGACGATCC
GCAAGCGCACCTCTCGCAGATCGTTGAGGCCTCCGATGACTCGAAGCCCA
TCTTCAAAGATACAGCATGCTTAAATGTACGCACTAGCCTGCCTCAGGAC
CATGCGTGCTGTCGCCCTCGCCGAAGAGGCCGCCAGCCGCAGGAGGGCCC
GCAGCCCGGGTGGGGGGTACGCTCGACAGGGTTTTACGTTCATGACACCA
CAGGGACAAGAGCCTGAGCGCATTGTCCTTCGTATACCACCGGTTTCCTC
CGGCACAAGCCTTGAGAGAAGATTTTGAACACCCAGAAAGCAGATCAGGC
GCCAGCCGACGAGAGACATCCTATGAAGAAGTCCTCGCAGTTCTCGTCAT
TTGGGAAGGTCAACGGTACTGAGGAGGAGAAAAAAGACACTCCTTTGGAC
GATCCGCAAGCGCACCTCTCGCAGATCGTTGAGGCCTCCGATGACTCGAA
GCCCATCTTCAAAGATACAGCATGCTTAAATGTACGCACTAGCCTGCCTC
AGGACCATGCGTGCTGTCGCCCTCGCCGAAGAGGCCGCCAGCCGCAGGAG
GGCCCGCAGCCCGGGTGGGGGGTACGCTCGACAGGGTTTTACGTTCATGA
CACCACAGGGACAAG
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Synonyms
Publications