rna7592, rna7592 (mRNA) Nannochloropsis gaditana

Overview
Namerna7592
Unique Namerna7592
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length411
Alignment locationCM002472.1:317661..318038 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101567g1.9718.mrna
Orig protein idgnl|cribi|Naga_101567g1.9718
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:317661..318038 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101567g1gene7349Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7592rna7592-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23102.1cds7572Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7592 ID=rna7592|Name=rna7592|organism=Nannochloropsis gaditana|type=mRNA|length=411bp
ATGTTCCACCGGTCGCATCGACCTCCCCCACAATTTCTTCATGTCCCGCT
ACGCGGAGGCTTACAAGAACGAGACCATCGCCTTCTGCCAGACTCTGCAG
GAAGGGAAGGCTCCCTCCCCTTCCGGGCACGACGGGAAGATGGCTTTGGT
GCTGGCCATGGCCTGCGACAAGTCCTTCAAGGAGAAGCGCCCTGTCAAGA
TTACCGAGATTCTCCCGTAAGCTCCAGGGAGGATGACAAAGGAGGGTGGA
GGTGGGGGGGTGGAGCGGCGTATGGAGAGTGGAGGAAGGAGGGGAGGGAG
GAGGGGAGGGAGGAGGAAGCTGCGGTGCCGCCTGGGAAGAGGAGGAGGAA
GCGGGGAGCGGGTGTGGAAGTGATGGGAAAGGAAGGGAAGCCCCGGCAGT
GGGACGGGTAG
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protein sequence of rna7592

>rna7592-protein ID=rna7592-protein|Name=rna7592|organism=Nannochloropsis gaditana|type=polypeptide|length=70bp
MGQGGREGWREETDVLEVYSREYPSIVEELRRMEGGRATLSEAGGDAHSM
DCLFEKPRRAKDLKNLNWTN
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mRNA from alignment at CM002472.1:317661..318038-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7592 ID=rna7592|Name=rna7592|organism=Nannochloropsis gaditana|type=mRNA|length=378bp|location=Sequence derived from alignment at CM002472.1:317661..318038- (Nannochloropsis gaditana)
ATGGGCCAGGGAGGGAGGGAGGGGTGGAGGGAGGAAACGGACGTGTTGGA
AGTGTATTCTCGGGAGTATCCCAGCATTGTGGAGGAGCTGAGGAGGATGG
TGATCGAGGCCCAGGACGAGGACGAGGGGGGGGCCGAGGGAGGGACGGAG
GAAGGGAGAGAGGGAGGGCCCGGGCCTGGGGAGAAAAGGGAAGGAGTGGC
GGAACGGCGGTCTACTGAGGTGCCGCCGGAGATGCAGACGGCCTGATCTT
GGGGGGGGGGGAAGGAGGGGGGGAGAGCAACCCTTTCTGAAGCTGGAGGG
GACGCCCATTCGATGGACTGCTTATTTGAAAAACCGCGTCGAGCGAAGGA
TTTGAAAAACTTGAACTGGACGAACTGA
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Coding sequence (CDS) from alignment at CM002472.1:317661..318038-

>rna7592 ID=rna7592|Name=rna7592|organism=Nannochloropsis gaditana|type=CDS|length=426bp|location=Sequence derived from alignment at CM002472.1:317661..318038- (Nannochloropsis gaditana)
GAGGGGGGGAGAGCAACCCTTTCTGAAGCTGGAGGGGACGCCCATTCGAT
GGACTGCTTATTTGAAAAACCGCGTCGAGCGAAGGATTTGAAAAACTTGA
ACTGGACGAACTGAATGGGCCAGGGAGGGAGGGAGGGGTGGAGGGAGGAA
ACGGACGTGTTGGAAGTGTATTCTCGGGAGTATCCCAGCATTGTGGAGGA
GCTGAGGAGGATGGAGGGGGGGAGAGCAACCCTTTCTGAAGCTGGAGGGG
ACGCCCATTCGATGGACTGCTTATTTGAAAAACCGCGTCGAGCGAAGGAT
TTGAAAAACTTGAACTGGACGAACTGAATGGGCCAGGGAGGGAGGGAGGG
GTGGAGGGAGGAAACGGACGTGTTGGAAGTGTATTCTCGGGAGTATCCCA
GCATTGTGGAGGAGCTGAGGAGGATG
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Synonyms
Publications