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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101197g2.5834.mrna |
| Orig protein id | gnl|cribi|Naga_101197g2.5834 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:312986..313828 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7589 ID=rna7589|Name=rna7589|organism=Nannochloropsis gaditana|type=mRNA|length=4772bp
GGTGTTCTCGCAGGAGGGAGGGTCCACGGCTTGGGAAAACCAGCAAGAAC
AATACCAGCAGCCGCAGCCGTTTCCACAAGGACACTACCATCCGCCCGCG
GGGGAAGAGCAACAGCAGGGAGTGGATGGAGGGCGCCCGTATGCTCCCCC
CCTTGAAGAACGTGGAGGGGAGGGGTTGGGAGGGGAAGGAGGAAAACATG
TATGGGAGGGGCAAGACAACACAAACGACCTTCCACAGGTCCAGGCGTCG
TGGATATCCTCCCCTCCCTCCCACCCTTCTTCCCTCCCTCCCCCCCGCCC
TCTCGCCTCCCCCGGCGCCTACCCCTCTTCCCACCCCGCCACAGTCCTTG
CCCCACTCGCTCAGCAACCTGCCCCTCCCACGGCCCATTTATCCTCACCG
GCCTCCACACGGGCACGCATGCCGTACGCGCCCGCCCCCCATCAGCCCTC
CGTGTTTAATCCCGCGGCGGTATTGGCTTCCCCGACGCTCCCATCCTCCT
CCCCTGCCTCCCTCCCCCCCTCGCTCTCGCCGTCGAGGCCGACCGGGGTC
TCACTGAGGGCGTCCGGGGGGCCAGGAGCCAGGGAGGGGGTTGGAGAGCA
CACGGGTTTTGACCCGACGGCGCATATCTCTTCCAGTGGAGAAGGCACAG
GAAGGGAGGGAGGGCGGGAGGGAGGGAGGAGTGCCGCGGAGACCTCCTTC
CATTTGCAGGCCGCACAGGCCAACCGAAGGCATTTCCGGCAACAGCAAGA
ACAGGCACCTCAACACCCCGCCGGCCCGGTGTCGTCGCAGCAGCCGCAAG
ACCAGCTTTACGGACAGGCAGGACCCCCGTCCCTCCAGGATCAAAGTCAC
GGCCTTCCCCCCAGCCCTGCAACCACCGCTGCCCCTGCCCTCCCTGCCCG
TGTCCCTCCTTCCGCACCTGCTTCCTTCCCTCCCCGAACGCCGGGAGGGG
GAACGTGCTACGCCCGGCGTGACCGACGCCATCCACGGCCGCGGGGAACC
CCCCTCTCCTTCTCCCTGACCCATCTCCTCCTTTCGCCCCCCACGCAGAG
CAAGCGTTTCCGCTCCCTGGCTCCCTCCCACCACCCAGGAGGACAAGAAG
CGGGTCACGGGGAAGGAGTGGGTGGGGAGGAGAAGGGCCTGCGGAAAGGG
CCTGTTCGGCTGCGGGCCTTGGAGAAGGAAACGGGGCCGGTGCTTCCCCT
CTTTGTCGACGCCGTTGCCGCGGCCGCTGCCGCCGGAGGGGGTGCGGGGG
AACCGCGGCCGGCGTGCGATTGGACCGTGGAGAAAGCCTTGGCCTTTGCG
CGATGTCGGGTCGAGGCCTGGGGGGGGCGACGGAGGGAGCCAGGGCGTGC
CGAGGGCGAATGGTTGCTGTGGAAATTGGTGGAAGTCGCCTGCAAGCATC
GGGGGCACCTGAGGTCGCTGGCGGGAGCTGTGGATGCGCGTTCGCCCGAG
ACGGAAGTGATCGAGGCGTTGCGGGGGGAGGATAGGAGGGAGGGCGGGAG
GGAAGACGGGAGGGAGGGCGGCTTAAACGCGACGCGTGGATCCGGCCCGC
CTCCCAAACCCTTCCCCGCACCAGCTTTACCCTTCCCCCCCTCCCTCCTT
CCCCGACACCTTCTCAACGCGCGGTCATCGTGGAGGAAATGGAGGATCTG
TTGATCCGAGGAGACCCTGCGGCCGCTTTGGATCTGGCCCTCCGCCACTC
CCTCTTCGTTGAGGCCCTGCTCTTGGCCGGCCATGTGCCCCAGCATGCCG
TCCAGCCCGGTTCGGGTGGGAGGGAGGGAGGAGGGGAAGTAGGACGGGGA
CATGCCGCTCCGCAGCAAAGCCGTCCCCAGCTAACACCCGTACAGCAGGT
CATCGTGGCGTATTCCCAAGCCTCCCTCCCCTCCGGCCTACCTTTCCACG
CCCTCTGTCTCCACTTGACCGAGCAGCCCCTCCTTTCCCCATCCCCTTCT
GCTTCCTCTGCTGCCTCCCACGCCCTTGCTGGTCCTGGAAACCCCTTTGC
TCGGGCACAGCAACTGCAGCAACAGCACCAAGCCAAAGGGCAGGGATCGC
CTTCCCTTCCTGAGAGTGACGGGCCTTCGCCTCTTCCCCTTTCCCACCAT
TGGAAGCGGACCCTCGCCCTCCTTCTCTCCCTCCCTCCGTCTTCCTCTCC
TTGCACCCCCGCCCTCCCCATGTCCAGCCCCGTTCCTGGGGCGACTGCGG
CCCGCTCGCCTGCTTCCTCCGCGGCTGCCGCCTTCACGCCTGCGCCTAGC
CCCAATCACGCCATCTTGCAGCTTGGTGACTCACTGATGCGGGAGAGCCC
TCCCAAAATCAGGGAGGCCCATGCCTGCTACCTGATTGGAGGGCTTTTGC
CGGGGGGAGGGGACGAAGGGGGGAGGGAGGACGGGCCGGAGGATGGTCGC
TTGTCCTTCCTGTTGGTGGGAATGGATGCCCGGAAGGAAGGCGGGAAAAG
GCTGGGCACGCCTGAGGCCGTGGAAGCGTTTTACAGGGCGGACATTCTCG
ACTTTCTCCGCCAACATTACAGCCACTACCGACGCCTGGGAGGGGGGGGA
GGGGGAGTGGGCAGGTCGGGCCTTGCTGTTCAGGCGCACCAATCGGGGGG
AAAAGAAACCGGTGTCCTTCCCCCCCGCCCAAGCTGTCTCCTCCAATACT
ACCGGCTGCAGATGGCCAAGGCCTTGGCGGAAGGCGGGTATATGTGGGAG
GCTCTTGACTACGCCAAGAGCGTGAAAGCCTTCCTCCTTCCCTTCCTCAC
CTGGGACGTGGTCGAAGGCCGGATCACGCACTTTGTCCTCCCGCCTTCCC
TCCCTCCTTCCCTTGCCCCTTTGTGGACCCGGACGCTCGCCCAAGAGGCG
ATTGTTTTCCAGGCCCGAGTCGAGGACGAGGTAGGGAGGGAGGGCGTGCG
ACCCAAGCCCCTGGTGGCGCCTGTGAGGAGGAGCAGCGTGCAGGTGGGGA
AGGGCATTGTGAGTGGCTTGATGCGGAATTTGGGGAGTCTGGTGCAAGAG
ACCATCCATAAAAGTGTCTTTGAGGAAGACGCAGGGAGGGAAGAGCCAGT
GGAGAAGAAGGAGGGGGGGAAAGAAGGGAGGACGGTCACTGAGGGCTTGT
ACGCCCCTTTCGTCTACAAGGGACCCTGGGGACGTGTGGTTGGGAGGGGG
GGAGGGGAGGAAGGAGGGCGGGAGGGCAAGAGGGAGGGGGAAAATGCCCT
GGACAATGGGCCGGAAACGGCACCCTTTGCACTGCGTCGCTTTGCCTCTG
CCCCTGCCAAGCCGTCCTCCACACCAGTGCCGCAACAGCCGCCACAACAA
CCCCAGCAGCAGCAACAACAGGCACAGCATCAGCAGCAGCCGAAGCAGCC
AGGCCTCCCTCCCAATATCCCCATCACCGCCTCGACCTCCCCCTCCTCCT
CCACCTCTTCCACCCCCTCGAGCCCTCACCCTCCGCCCAACCAGTGGTAC
CCCCAGGGAGCCATGCCACGGAAGTCTTCCTCCCTCGTGCCCTCCGTCGG
CTCCTCCCACCCGTCCTCCCTCTCTTGTTCCGCGTCCGGAACATCCTACG
CCAGCGCCGTGGAGGACATGAGCGTCAGTCAACACACCCCCATGCCTCCT
CCTTCCTCCTTGCCGGCCATGGTCCCGCCCCTTCCCCCTCCGGGTCGTCA
AGTGCAGCGCACTGCTGACTTGAACCATGTCGGAGGGAAAGGAGAAAGTG
CGGAGGGAGGGAGAGACGGAGAGGGATCCTCCCTCGCCCACCCGCCTGCC
CTTCCTCCTTCGGTCCCCGCGACGGATATCAGCACGACCGGAAGCACCGC
CAGCAACAGCGGCAAGAGTACCAGCGTCCATAAGGCTCCCGCTGTGAAAA
GTGTGGCCAGAAGCAGCAGCGCAGGGGGAAGTGGTACCAGCACTCCCACG
GGAGGGAGCGGGGGAGGGATGGTGGGGAGGCTGGCCGGTCTGCTGGGAAT
TAAGAAACCGGTGACGGCGGACCTGGGGGAAAAAATGGAGGCCTATTTCG
ACAAGGACAAGAATCGATGGATTTTCCCGGGCCAGGACGGCGAAGAGGAG
GAGGAAGATGCGTCCTTGAAACCCCCGCCAACGGGTCCCATGGGAGGTGT
CCCCGCGGGAGGAGGACATGGGGCCGGGAACGAAGGCGGGAATGGCGGCC
CGATGGATGCTTTGAGCGCGATGATGGCGCCGCCGCCCCTGCGAGGTCTC
CCCGTGCGAAGGGCGACCGTGGGGGCTCCCATTGGGGGCCCGGCGGGGCT
TGGGATGGGAAGTGGAGGAGGGGGGGGGGGCGGGAGGGGTCAGGGCACAG
CACCTGGTATGGCAGGGAGGGGAGGGGAGGCGGGAGGGGGGCCGCGGTTT
TTTGTCCCACGAAAGCTTACCGAGCAAGAACAACAGGAGCAGCAACATCA
ACAGCAGCAGCAACCAGGGCAACAACAGCATGAGTAGCGGTCGTTCTATT
GCAGGGACCGGAAATGGCGAATCTTCTGTTGCGATCATAGCACGTGTTCG
CCTGTGACAAAGCGGATGCTTCATGTTTCCTGCGAGACGAAAAACGCAGC
GTGCGTGTTAGAACGACCAGCATACGGATGGGAGATGTGGTGGAGTGGGG
AGAGGGAGGCAGTTAGGGAATTATGAAGGGTTTGAGAGCCCTGAGAAGAT
CTCGATAGAGATTGAAAATCAATAGGAAGGAATGGCGAGACGGAAGCGAG
ACGGATGCCAAAAATAGATAGAAGCTTTTACCCTTTTCAAGGCTAAAATG
ACAGCTATACCACCAACTTTGT back to topprotein sequence of rna7589 >rna7589-protein ID=rna7589-protein|Name=rna7589|organism=Nannochloropsis gaditana|type=polypeptide|length=245bp
MSGFNAPPFSSHAIPNPPVTNDGPNPTLRSRPVRRGSTSQRVGSEGLPLS
SSQTMPRPGSPSRVMEGAPDAEMRPSYATNSALPPPPRMPMSMATAGRSL
PSPSSRPGPPPYLPPPLPPSVSAHSTTTFASSTRSSGGSTPRSAMTGAHE
AIPPMSPSYPSHQAPTRSPLPSSPPPPPPPSSSSIDLPVTARALSSRLSP
RQYPPLPPVGSFTGGSVLDPGRGGGGGGGGGGRGRGGGRGGGGET back to topmRNA from alignment at CM002472.1:312986..313828- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna7589 ID=rna7589|Name=rna7589|organism=Nannochloropsis gaditana|type=mRNA|length=843bp|location=Sequence derived from alignment at CM002472.1:312986..313828- (Nannochloropsis gaditana)
AGGCACGCAAGTGTCTTCAGGCTTTTGGAGCGATCTCGGCATCACTCACA
CGTGAGCAGGAAGAGCCTCGGTACCCAACTAGCCAACTCCGGTCCAGACT
CAGGGGATGAGCGGTTTCAATGCCCCTCCTTTCTCATCACACGCCATTCC
AAATCCTCCTGTCACCAATGACGGACCCAATCCCACCTTGCGCTCACGGC
CAGTCCGTCGCGGGAGCACCTCCCAACGTGTAGGAAGCGAAGGACTTCCT
CTCTCCTCCTCACAGACCATGCCACGGCCTGGCTCCCCTTCAAGAGTTAT
GGAGGGAGCACCTGACGCGGAAATGCGGCCTTCGTACGCCACAAATAGTG
CTCTTCCCCCACCGCCACGCATGCCCATGTCCATGGCCACGGCAGGGAGG
AGCCTTCCCTCCCCATCGTCCCGCCCGGGACCCCCTCCTTACCTTCCTCC
CCCGCTCCCGCCTTCCGTCTCCGCCCACTCCACCACTACCTTTGCAAGCT
CGACACGCAGCAGCGGTGGTTCAACCCCGCGAAGCGCGATGACGGGCGCA
CATGAAGCCATTCCTCCCATGTCGCCCTCATACCCATCTCATCAAGCGCC
AACCCGGTCCCCCCTCCCTTCTTCCCCTCCGCCTCCTCCTCCTCCATCCT
CATCGTCCATCGATCTGCCCGTCACCGCCCGTGCCCTGTCGTCCAGGCTG
AGCCCTCGCCAATATCCACCTCTGCCCCCTGTCGGCAGCTTTACTGGAGG
GAGCGTCCTAGACCCTGGAAGGGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAAGAGGACGAGGAGGAGGACGAGGAGGAGGAGGGGAGACAAG back to topCoding sequence (CDS) from alignment at CM002472.1:312986..313828- >rna7589 ID=rna7589|Name=rna7589|organism=Nannochloropsis gaditana|type=CDS|length=737bp|location=Sequence derived from alignment at CM002472.1:312986..313828- (Nannochloropsis gaditana)
ATGAGCGGTTTCAATGCCCCTCCTTTCTCATCACACGCCATTCCAAATCC
TCCTGTCACCAATGACGGACCCAATCCCACCTTGCGCTCACGGCCAGTCC
GTCGCGGGAGCACCTCCCAACGTGTAGGAAGCGAAGGACTTCCTCTCTCC
TCCTCACAGACCATGCCACGGCCTGGCTCCCCTTCAAGAGTTATGGAGGG
AGCACCTGACGCGGAAATGCGGCCTTCGTACGCCACAAATAGTGCTCTTC
CCCCACCGCCACGCATGCCCATGTCCATGGCCACGGCAGGGAGGAGCCTT
CCCTCCCCATCGTCCCGCCCGGGACCCCCTCCTTACCTTCCTCCCCCGCT
CCCGCCTTCCGTCTCCGCCCACTCCACCACTACCTTTGCAAGCTCGACAC
GCAGCAGCGGTGGTTCAACCCCGCGAAGCGCGATGACGGGCGCACATGAA
GCCATTCCTCCCATGTCGCCCTCATACCCATCTCATCAAGCGCCAACCCG
GTCCCCCCTCCCTTCTTCCCCTCCGCCTCCTCCTCCTCCATCCTCATCGT
CCATCGATCTGCCCGTCACCGCCCGTGCCCTGTCGTCCAGGCTGAGCCCT
CGCCAATATCCACCTCTGCCCCCTGTCGGCAGCTTTACTGGAGGGAGCGT
CCTAGACCCTGGAAGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAG
GACGAGGAGGAGGACGAGGAGGAGGAGGGGAGACAAG back to top
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