rna7586, rna7586 (mRNA) Nannochloropsis gaditana

Overview
Namerna7586
Unique Namerna7586
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length621
Alignment locationCM002472.1:305300..306335 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100643g3.9561.mrna
Orig protein idgnl|cribi|Naga_100643g3.9561
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:305300..306335 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100643g3gene7343Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7586rna7586-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23105.1cds7566Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7586 ID=rna7586|Name=rna7586|organism=Nannochloropsis gaditana|type=mRNA|length=621bp
CACGCCTAACTTTATCTCCTCTTCATGCGTCTTGCACTTATCCTCATAGC
GCTCGCTGGACGTGCTAAAATCCAGCTCTTAAGCATGTGGTATCTACGGC
GCTTTCTCCTCCGGCAGCCTCGCAGTCATGCCCTGTGCCCCACCTCCCCG
TCTTCCTCCCACGCACCTTCCTCTTCCCTGCCCTCTTCCCCCCTCCAATG
CCGTGCTCTAAGTAGCACTGGCGGGGCCGGCTTCTATAATTTCCCCCCCT
CGGCTCACTATGACCTGATCGTGATTGGGTCGGGCCCTGCTGCGCAAAAA
TGCGCGATCGACAGCGTGAAACGAGGACGCCGGGTGGCCATGATAGATAA
GAACAGCCAAATGGGCGGTGTGTGCGTGCACACAGGTAAGAAATCGCCGT
GTCCGCCTTGGGGTATCTTCGATGTCGGCACGGAGGACCTTGGTCGAGTC
CTGCGTCGTCCTGTTGGAGTGGGGAGGGCTGGGCGGGGGCAAAGAGGGAC
GACAGCGCCTCGTATGCACTCAACCACCCACTCCTCTTCACCTCGTTTAC
GCACACAACCATGCCCCCGGGACCAGGCACCATCCCGAGCAAGACGTTCA
GGGAGGCCGTCCTGCACTTGA
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protein sequence of rna7586

>rna7586-protein ID=rna7586-protein|Name=rna7586|organism=Nannochloropsis gaditana|type=polypeptide|length=249bp
MHPSSRIRRCHWPWSLWTLGGLVTSPCTAFLVPSPSTPLSAPRDTHVPHC
LAPIVAATKSEASHASGTHVPPMVAIVGQPGSGQSTFSRLLLQDFPSLRL
VSSSSEPGVLQDVRAIFQAAAEDTHPPSHPITFPQALSQVLASRIDVLSR
GPTPPPLLLDAWPRSVEEWKVVEGQEGGREGRAYRLNACVFLDTGEETED
ADLRDLREALGEGGKEGGKEGGKAWVVENSGAIKEVYARVKAILAPILL
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mRNA from alignment at CM002472.1:305300..306335-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7586 ID=rna7586|Name=rna7586|organism=Nannochloropsis gaditana|type=mRNA|length=1036bp|location=Sequence derived from alignment at CM002472.1:305300..306335- (Nannochloropsis gaditana)
ACAAAAAAATACAGCACGGTCGACCCAAACTCACTTCCGCCCGTCCATAA
CGTCGCGTAGCCCCAGGCCCGGAAAGGGCAACAGCAACAGCAACCTGCAG
TTTAACTTGTCCTCCTTTCAGCCCCTACCGACAACAGCATGCATCCCTCA
TCACGAATAAGAAGATGTCATTGGCCATGGAGCCTTTGGACACTGGGTGG
GCTTGTTACCTCGCCCTGCACGGCATTTTTAGTTCCCTCTCCCTCCACAC
CATTATCGGCCCCTCGAGACACGCACGTGCCACATTGCCTGGCACCAATT
GTCGCCGCAACCAAGTCAGAGGCGTCTCATGCTAGCGGAACGCATGTACC
ACCCATGGTTGCTATTGTTGGGCAACCTGGTTCTGGACAGTCGACATTTT
CGCGGTAGGCACTCTTGGACTTCCTCCCTGTCCTCCCTCCATTGCCATCT
ATTCCCTTGAATGAAGTCACACCTCGGAAGAATGAGTCCCCTGGACTATA
CGCTCCTGCATCCGTATGCTGCTGACACTTTCTTTCTATGTCTCAAACTC
TTTCAGCCTGCTTTTGCAGGACTTCCCCTCCCTGCGCCTCGTCTCCTCAA
GCTCAGAGCCAGGGGTTTTGCAGGACGTTCGTGCCATCTTCCAGGCCGCC
GCCGAAGACACGCACCCCCCTTCCCATCCCATCACTTTCCCACAGGCCCT
AAGTCAGGTCCTCGCGTCGCGGATCGATGTATTGAGTCGAGGGCCGACGC
CTCCTCCTCTTCTCTTGGACGCCTGGCCGCGGTCCGTTGAGGAATGGAAG
GTGGTGGAAGGACAGGAGGGCGGGAGGGAGGGCAGGGCATACCGGCTGAA
TGCCTGCGTCTTTCTGGACACAGGTGAGGAGACGGAGGACGCGGATCTGC
GGGACCTGAGGGAGGCCTTAGGGGAGGGCGGGAAGGAGGGCGGGAAGGAG
GGCGGGAAGGCGTGGGTGGTGGAGAATTCGGGGGCGATCAAGGAAGTGTA
CGCCCGGGTGAAAGCAATCTTGGCGCCCATCTTGCT
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Coding sequence (CDS) from alignment at CM002472.1:305300..306335-

>rna7586 ID=rna7586|Name=rna7586|organism=Nannochloropsis gaditana|type=CDS|length=1492bp|location=Sequence derived from alignment at CM002472.1:305300..306335- (Nannochloropsis gaditana)
CCTGCTTTTGCAGGACTTCCCCTCCCTGCGCCTCGTCTCCTCAAGCTCAG
AGCCAGGGGTTTTGCAGGACGTTCGTGCCATCTTCCAGGCCGCCGCCGAA
GACACGCACCCCCCTTCCCATCCCATCACTTTCCCACAGGCCCTAAGTCA
GGTCCTCGCGTCGCGGATCGATGTATTGAGTCGAGGGCCGACGCCTCCTC
CTCTTCTCTTGGACGCCTGGCCGCGGTCCGTTGAGGAATGGAAGGTGGTG
GAAGGACAGGAGGGCGGGAGGGAGGGCAGGGCATACCGGCTGAATGCCTG
CGTCTTTCTGGACACAGGTGAGGAGACGGAGGACGCGGATCTGCGGGACC
TGAGGGAGGCCTTAGGGGAGGGCGGGAAGGAGGGCGGGAAGGAGGGCGGG
AAGGCGTGGGTGGTGGAGAATTCGGGGGCGATCAAGGAAGTGTACGCCCG
GGTGAAAGCAATCTTGGCGCCCATCTTGCTATGCATCCCTCATCACGAAT
AAGAAGATGTCATTGGCCATGGAGCCTTTGGACACTGGGTGGGCTTGTTA
CCTCGCCCTGCACGGCATTTTTAGTTCCCTCTCCCTCCACACCATTATCG
GCCCCTCGAGACACGCACGTGCCACATTGCCTGGCACCAATTGTCGCCGC
AACCAAGTCAGAGGCGTCTCATGCTAGCGGAACGCATGTACCACCCATGG
TTGCTATTGTTGGGCAACCTGGTTCTGGACAGTCGACATTTTCGCGCCTG
CTTTTGCAGGACTTCCCCTCCCTGCGCCTCGTCTCCTCAAGCTCAGAGCC
AGGGGTTTTGCAGGACGTTCGTGCCATCTTCCAGGCCGCCGCCGAAGACA
CGCACCCCCCTTCCCATCCCATCACTTTCCCACAGGCCCTAAGTCAGGTC
CTCGCGTCGCGGATCGATGTATTGAGTCGAGGGCCGACGCCTCCTCCTCT
TCTCTTGGACGCCTGGCCGCGGTCCGTTGAGGAATGGAAGGTGGTGGAAG
GACAGGAGGGCGGGAGGGAGGGCAGGGCATACCGGCTGAATGCCTGCGTC
TTTCTGGACACAGGTGAGGAGACGGAGGACGCGGATCTGCGGGACCTGAG
GGAGGCCTTAGGGGAGGGCGGGAAGGAGGGCGGGAAGGAGGGCGGGAAGG
CGTGGGTGGTGGAGAATTCGGGGGCGATCAAGGAAGTGTACGCCCGGGTG
AAAGCAATCTTGGCGCCCATCTTGCTATGCATCCCTCATCACGAATAAGA
AGATGTCATTGGCCATGGAGCCTTTGGACACTGGGTGGGCTTGTTACCTC
GCCCTGCACGGCATTTTTAGTTCCCTCTCCCTCCACACCATTATCGGCCC
CTCGAGACACGCACGTGCCACATTGCCTGGCACCAATTGTCGCCGCAACC
AAGTCAGAGGCGTCTCATGCTAGCGGAACGCATGTACCACCCATGGTTGC
TATTGTTGGGCAACCTGGTTCTGGACAGTCGACATTTTCGCG
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Synonyms
Publications