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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100316g8.2357.mrna |
| Orig protein id | gnl|cribi|Naga_100316g8.2357 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:295310..298527 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7582 ID=rna7582|Name=rna7582|organism=Nannochloropsis gaditana|type=mRNA|length=213bp
ATGGATGCGTTAGTATTTGCGGACTGCATGCGCGGTGGCCAGGTCTGGCG
GCCTGTTAAACTTTCCTGCCCCGCAACACTTGTACGACTGAAAAGTTTAA
TAATACATCAAAAGACAATAGTCAAGTCTTGTGGTTGCGAGATGACCAAA
GCCGAAATTTGGCACTCCACAGGACATTCGGGGCCCTGCGAGATGACTAA
AACCGAAATTTAG back to topprotein sequence of rna7582 >rna7582-protein ID=rna7582-protein|Name=rna7582|organism=Nannochloropsis gaditana|type=polypeptide|length=758bp
MLVSFSDRVAPTSFAGTSGTESKLTSQRVVILSIVSMAFYPGLIRIYSMF
CPLALTGPCQLQGQAKEVPFLLFHLSIPPRLRVMHHNMRPLAFVSHIPYV
CTAGVATPNGKPSRKPASEKVAEHNRLLRDAPHANSTYSPTAPGLKMLHE
MAEEALVLFHRGSAGGRKDHHDDGDGGWRSLANPTTRDGVYRRSLFPSLW
LEEEEEEQEVEQRDTCDKEMTHVEDKVGSESDGEGSSFGLMEALPQDAVL
HVLSMLEAEDMARLGATGKDLRTRVMGSEATWPWLQVCLQAWNLSTTTPY
AALWTSSPLPPAAVLSRLYPLIVPWPAEIETATRKPLRRTPSTMSLEGAR
RTGVGFKVMGHHRVQYVGEGLGAGNRAIRSTVPFPSLESVWEGGRVRPRA
GRTEGQDQGARKGHGEGRGGEETVWARLSRLTRQFQLPPPPALPPSLAAA
AAAAAAAMAGGGGRGSNEVGNRRGALPYAQLFSTSAPAALSSFMLGGERE
EEEREEDAVEAGGEGAGGEAGADNDGARFVSWGEGGEGGSGGGLLGRGCG
PMEEEAPPSPSPGPCAFSAAWVRKEGKVGGGETGWWWTWRRVWWVTTRWQ
SCSGRRRRTEGRAGSLLTPRDRPCPWRLCRRRWWKGTGKGGRRKGRRTSR
CSFWKKKKKRRTKRRTKRRRKRRRRRRRRRTGGSPRLQGRRLLTAPPPST
PATTAWPWGWPAETSPWRATCPGGTRPPTPSTRTTAASSTAPGLRCGTTA
RPTARVTW back to topmRNA from alignment at CM002472.1:295310..298527+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7582 ID=rna7582|Name=rna7582|organism=Nannochloropsis gaditana|type=mRNA|length=3218bp|location=Sequence derived from alignment at CM002472.1:295310..298527+ (Nannochloropsis gaditana)
AAAAAGTTTGGAAATTACTATCCGAGTCGTCCTCGACCAAAACACAGCTC
CCGCTGGGGTCCCAAATGCTATGTCCCGCCCCTTTGGATCCTTCGCTGGC
ATCAACACCTCTTTCCTTATGTCTTGGAGGTCCGGGGGTGATGGTGCCAG
TGAAAGTGCCCTCCCTGTGCGGCTTGGGGATTAAAACGAAGAGACAACTG
CCGCTGTGACGGAATGCTCGTGTCGTTCTCAGACCGGGTGGCTCCCACGA
GCTTCGCGGGGACCTCCGGCACGGAGTCAAAGCTGACGAGCCAGAGAGTA
GTGATACTCAGCATCGTGTCCATGGCCTTTTATCCAGGTCTTATCCGGAT
TTATTCCATGTTCTGTCCCTTGGCTTTGACAGGCCCGTGTCAACTTCAAG
GACAGGCAAAGGAGgtgcccttccttctcttccacttGTCGATTCCTCCT
CGACTTAGAGTGATGCACCACAACATGCGTCCTCTCGCATTCGTCTCTCA
TATCCCTTATGTATGTACAGCAGGAGTTGCAACGCCCAACGGGAAACCAT
CGCGCAAACCAGCTAGCGAAAAGGTGGCAGAACATAACCGACTGCTTCGT
GACGCTCCACACGCAAACTCAACATACAGCCCCACCGCCCCAGGACTCAA
AATGCTGCACGAAATGGCAGAGGAGGCTCTCGTCTTATTCCATAGAGGTA
GTGCTGGAGGACGTAAGGATCATCACGACGATGGCGATGGTGGGTGGCGG
TCTCTAGCCAATCCAACAACCCGTGATGGCGTCTATCGACGgagcctctt
cccttccctgtggcttgaagaggaggaagaggagcaggaggtggaacAGA
GGGACACGTGTGACAAAGAAATGACGCACGTGGAAGACAAAGTGGGCAGC
GAAAGCGACGGAGAAGGCTCGAGCTTTGGTTTGATGGAAGCTTTGCCCCA
AGACGCGGTGCTCCACGTGTTGAGTATGTTGGAGGCTGAGGACATGGCAC
GTTTGGGGGCGACTGGGAAAGACTTGCGAACGCGGGTGATGGGGAGCGAG
GCGACCTGGCCCTGGCTCCAAGTTTGCCTGCAGGTGCGTGGGGTAAAGGC
AAAGGTAGAagaggccggagggagggaggggggaagggctgcCCCGTGCG
GATGGAGCTCACCACCACCCTGCACTGaacctcttctctttccctctcca
tcccttggtTGGACAGGCATGGAACCTCTCAACGACCACTCCCTACGCCG
CGCTTTGgacctcctcgcctctcccacccgccGCGGTCCTTTCTCGCCTT
TATCCCCTGATCGTCCCGTGGCCGGCGGAGATCGAAACGGCGACCCGAAA
ACCGTTACGCCGGACCCCATCGACGATGAGTTTGGAGGGAGCACGTCGGA
CGGGCGTGGGCTTCAAGGTGATGGGTCACCACAGGGTCCAATACGTGGGA
GAGGGTTTGGGAGCAGGGAACCGGGCGATCCGCTCCACGgtgcctttccc
ctccctggaGAGtgtctgggagggaggaagggtccgaccgagggcgggaa
ggacggagggacagGACCAAGGGGCGAGAAAGGGCCAtggggaaggccgg
ggcggggaagaaacCGTGTGGGCGCGTCTCTCTAGGCTCACGCGTCAATT
Ccagcttccccctccccccgccctccctccctccctcgcggctgccgcgg
ccgctgctgctgctgccatggcgggaggcggtggcaggGGAAGTAATGAG
GTGGGCAACAGACGTGGTGCACTTCCGTACGCGCAGctcttctccacctc
ggcccCAGCGGCTCTGTCGAGCTTCATGCTGGGCggggagcgagaggagg
aggagagggaggaggacgcagttgaagcgggaggggagggagcagggggg
gaggcaggggccgaCAACGACGGCGCCCGCTTTGTgtcgtggggggaggg
aggggagggaggttcggGGGGTGGGCTTCTTGGCCGGGGCTGTGGGccga
tggaggaagaagcccctccctccccttcgcccggGCCGTGCGCGTTCTCG
GCGGCTTgggtcaggaaggaggggaaggtgggggggggggagacgggctg
gtggtggacgtggCGCCGCGTCTGGTGGGTTACTACGAGGTGGCAATCAT
gctccgggaggaggaggaggacggaggggagggcaggcagcctcctcacc
ccccggGACCGGCCTTGCCCGTGGCGTTTGTGCCGACGccggtggtggaa
gggaacggggaagggggggaggaggaaggggaggaggacttctCGCTGCT
CTttctggaagaagaagaagaagaggaggacgaagaggaggacgaagagg
aggaggaagaggaggaggaggaggaggaggaggaggacgggtgggagccc
ccgcctccagggccggAGGCTCCTcacggccccgcccccctcaaCCCCAG
CAACAACTGCGTGGCCGTGGGGCTGGCCAGCGGAAACTTCCCCTTGGAGG
GCTACATGCCCGGGTGGGACGCGTCCTCCTACGCCTTCCACTCGGACGAC
GGCGGCATCTTCCACGGCACCGGGATTAAGGTTAGTGCAACCTGTCGACC
CTTGACTCCCGTCCCCTGAGCGGGCGTGCCGAGGACCATATGTAAGTGAG
tgactttcctccctcccttcctccctccctccctccctccaggtgcGGTA
CTACGGCTCGCCCTACGGCCCGGGTGACGTGGTAGGCTGTGGACTCGACT
ACAGGAGCAAGGAAATTTTCTTCACGCTCAATGGGGAGTACTTGGGCGTC
GCCTTCaaggtcggggaggagggcggggaagagggcgggggggagggcgg
aggtgcgAAGGCCCCTCTGTACCCGACCGTAGGCATCGATTCGCTCCACC
CTGTCCAGTTGAACTTCGGGGAGGAACCTTTCGTCTTCGACTTGCAGGCT
tacatggagggaggaacgggccCGAAGTGAGGGGAGAGGTCACCACAAga
gggtagaggaggaaggagggggagggggaggcaggcttaggagggcgaag
aggggcgCGGACTGTACAGAGGGTATGGCGCTCTTTTCCGCCAACGGCGT
cggaatggaaagggaagggaaggagctggGCAAGATTGTggccggcgggg
aggaggagggtgggagagggggtggaggccatgCGGAGGGTCTTAAGGAG
Ggtgacaggaggaggggg back to topCoding sequence (CDS) from alignment at CM002472.1:295310..298527+ >rna7582 ID=rna7582|Name=rna7582|organism=Nannochloropsis gaditana|type=CDS|length=6831bp|location=Sequence derived from alignment at CM002472.1:295310..298527+ (Nannochloropsis gaditana)
ATGCTCGTGTCGTTCTCAGACCGGGTGGCTCCCACGAGCTTCGCGGGGAC
CTCCGGCACGGAGTCAAAGCTGACGAGCCAGAGAGTAGTGATACTCAGCA
TCGTGTCCATGGCCTTTTATCCAGGTCTTATCCGGATTTATTCCATGTTC
TGTCCCTTGGCTTTGACAGGCCCGTGTCAACTTCAAGGACAGGCAAAGGA
GgtgcccttccttctcttccacttGTCGATTCCTCCTCGACTTAGAGTGA
TGCACCACAACATGCGTCCTCTCGCATTCGTCTCTCATATCCCTTATGTA
TGTACAGCAGGAGTTGCAACGCCCAACGGGAAACCATCGCGCAAACCAGC
TAGCGAAAAGGTGGCAGAACATAACCGACTGCTTCGTGACGCTCCACACG
CAAACTCAACATACAGCCCCACCGCCCCAGGACTCAAAATGCTGCACGAA
ATGGCAGAGGAGGCTCTCGTCTTATTCCATAGAGGTAGTGCTGGAGGACG
TAAGGATCATCACGACGATGGCGATGGTGGGTGGCGGTCTCTAGCCAATC
CAACAACCCGTGATGGCGTCTATCGACGgagcctcttcccttccctgtgg
cttgaagaggaggaagaggagcaggaggtggaacAGAGGGACACGTGTGA
CAAAGAAATGACGCACGTGGAAGACAAAGTGGGCAGCGAAAGCGACGGAG
AAGGCTCGAGCTTTGGTTTGATGGAAGCTTTGCCCCAAGACGCGGTGCTC
CACGTGTTGAGTATGTTGGAGGCTGAGGACATGGCACGTTTGGGGGCGAC
TGGGAAAGACTTGCGAACGCGGGTGATGGGGAGCGAGGCGACCTGGCCCT
GGCTCCAAGTTTGCCTGCAGGCATGGAACCTCTCAACGACCACTCCCTAC
GCCGCGCTTTGgacctcctcgcctctcccacccgccGCGGTCCTTTCTCG
CCTTTATCCCCTGATCGTCCCGTGGCCGGCGGAGATCGAAACGGCGACCC
GAAAACCGTTACGCCGGACCCCATCGACGATGAGTTTGGAGGGAGCACGT
CGGACGGGCGTGGGCTTCAAGGTGATGGGTCACCACAGGGTCCAATACGT
GGGAGAGGGTTTGGGAGCAGGGAACCGGGCGATCCGCTCCACGgtgcctt
tcccctccctggaGAGtgtctgggagggaggaagggtccgaccgagggcg
ggaaggacggagggacagGACCAAGGGGCGAGAAAGGGCCAtggggaagg
ccggggcggggaagaaacCGTGTGGGCGCGTCTCTCTAGGCTCACGCGTC
AATTCcagcttccccctccccccgccctccctccctccctcgcggctgcc
gcggccgctgctgctgctgccatggcgggaggcggtggcaggGGAAGTAA
TGAGGTGGGCAACAGACGTGGTGCACTTCCGTACGCGCAGctcttctcca
cctcggcccCAGCGGCTCTGTCGAGCTTCATGCTGGGCggggagcgagag
gaggaggagagggaggaggacgcagttgaagcgggaggggagggagcagg
gggggaggcaggggccgaCAACGACGGCGCCCGCTTTGTgtcgtgggggg
agggaggggagggaggttcggGGGGTGGGCTTCTTGGCCGGGGCTGTGGG
ccgatggaggaagaagcccctccctccccttcgcccggGCCGTGCGCGTT
CTCGGCGGCTTgggtcaggaaggaggggaaggtgggggggggggagacgg
gctggtggtggacgtggCGCCGCGTCTGGTGGGTTACTACGAGGTGGCAA
TCATgctccgggaggaggaggaggacggaggggagggcaggcagcctcct
caccccccggGACCGGCCTTGCCCGTGGCGTTTGTGCCGACGccggtggt
ggaagggaacggggaagggggggaggaggaaggggaggaggacttctCGC
TGCTCTttctggaagaagaagaagaagaggaggacgaagaggaggacgaa
gaggaggaggaagaggaggaggaggaggaggaggaggaggacgggtggga
gcccccgcctccagggccggAGGCTCCTcacggccccgcccccctcaaCC
CCAGCAACAACTGCGTGGCCGTGGGGCTGGCCAGCGGAAACTTCCCCTTG
GAGGGCTACATGCCCGGGTGGGACGCGTCCTCCTACGCCTTCCACTCGGA
CGACGGCGGCATCTTCCACGGCACCGGGATTAAGgtgcGGTACTACGGCT
CGCCCTACGGCCCGGGTGACGTGGTAGATGCTCGTGTCGTTCTCAGACCG
GGTGGCTCCCACGAGCTTCGCGGGGACCTCCGGCACGGAGTCAAAGCTGA
CGAGCCAGAGAGTAGTGATACTCAGCATCGTGTCCATGGCCTTTTATCCA
GGTCTTATCCGGATTTATTCCATGTTCTGTCCCTTGGCTTTGACAGGCCC
GTGTCAACTTCAAGGACAGGCAAAGGAGgtgcccttccttctcttccact
tGTCGATTCCTCCTCGACTTAGAGTGATGCACCACAACATGCGTCCTCTC
GCATTCGTCTCTCATATCCCTTATGTATGTACAGCAGGAGTTGCAACGCC
CAACGGGAAACCATCGCGCAAACCAGCTAGCGAAAAGGTGGCAGAACATA
ACCGACTGCTTCGTGACGCTCCACACGCAAACTCAACATACAGCCCCACC
GCCCCAGGACTCAAAATGCTGCACGAAATGGCAGAGGAGGCTCTCGTCTT
ATTCCATAGAGGTAGTGCTGGAGGACGTAAGGATCATCACGACGATGGCG
ATGGTGGGTGGCGGTCTCTAGCCAATCCAACAACCCGTGATGGCGTCTAT
CGACGgagcctcttcccttccctgtggcttgaagaggaggaagaggagca
ggaggtggaacAGAGGGACACGTGTGACAAAGAAATGACGCACGTGGAAG
ACAAAGTGGGCAGCGAAAGCGACGGAGAAGGCTCGAGCTTTGGTTTGATG
GAAGCTTTGCCCCAAGACGCGGTGCTCCACGTGTTGAGTATGTTGGAGGC
TGAGGACATGGCACGTTTGGGGGCGACTGGGAAAGACTTGCGAACGCGGG
TGATGGGGAGCGAGGCGACCTGGCCCTGGCTCCAAGTTTGCCTGCAGGCA
TGGAACCTCTCAACGACCACTCCCTACGCCGCGCTTTGgacctcctcgcc
tctcccacccgccGCGGTCCTTTCTCGCCTTTATCCCCTGATCGTCCCGT
GGCCGGCGGAGATCGAAACGGCGACCCGAAAACCGTTACGCCGGACCCCA
TCGACGATGAGTTTGGAGGGAGCACGTCGGACGGGCGTGGGCTTCAAGGT
GATGGGTCACCACAGGGTCCAATACGTGGGAGAGGGTTTGGGAGCAGGGA
ACCGGGCGATCCGCTCCACGgtgcctttcccctccctggaGAGtgtctgg
gagggaggaagggtccgaccgagggcgggaaggacggagggacagGACCA
AGGGGCGAGAAAGGGCCAtggggaaggccggggcggggaagaaacCGTGT
GGGCGCGTCTCTCTAGGCTCACGCGTCAATTCcagcttccccctcccccc
gccctccctccctccctcgcggctgccgcggccgctgctgctgctgccat
ggcgggaggcggtggcaggGGAAGTAATGAGGTGGGCAACAGACGTGGTG
CACTTCCGTACGCGCAGctcttctccacctcggcccCAGCGGCTCTGTCG
AGCTTCATGCTGGGCggggagcgagaggaggaggagagggaggaggacgc
agttgaagcgggaggggagggagcagggggggaggcaggggccgaCAACG
ACGGCGCCCGCTTTGTgtcgtggggggagggaggggagggaggttcggGG
GGTGGGCTTCTTGGCCGGGGCTGTGGGccgatggaggaagaagcccctcc
ctccccttcgcccggGCCGTGCGCGTTCTCGGCGGCTTgggtcaggaagg
aggggaaggtgggggggggggagacgggctggtggtggacgtggCGCCGC
GTCTGGTGGGTTACTACGAGGTGGCAATCATgctccgggaggaggaggag
gacggaggggagggcaggcagcctcctcaccccccggGACCGGCCTTGCC
CGTGGCGTTTGTGCCGACGccggtggtggaagggaacggggaaggggggg
aggaggaaggggaggaggacttctCGCTGCTCTttctggaagaagaagaa
gaagaggaggacgaagaggaggacgaagaggaggaggaagaggaggagga
ggaggaggaggaggaggacgggtgggagcccccgcctccagggccggAGG
CTCCTcacggccccgcccccctcaaCCCCAGCAACAACTGCGTGGCCGTG
GGGCTGGCCAGCGGAAACTTCCCCTTGGAGGGCTACATGCCCGGGTGGGA
CGCGTCCTCCTACGCCTTCCACTCGGACGACGGCGGCATCTTCCACGGCA
CCGGGATTAAGgtgcGGTACTACGGCTCGCCCTACGGCCCGGGTGACGTG
GTAGATGCTCGTGTCGTTCTCAGACCGGGTGGCTCCCACGAGCTTCGCGG
GGACCTCCGGCACGGAGTCAAAGCTGACGAGCCAGAGAGTAGTGATACTC
AGCATCGTGTCCATGGCCTTTTATCCAGGTCTTATCCGGATTTATTCCAT
GTTCTGTCCCTTGGCTTTGACAGGCCCGTGTCAACTTCAAGGACAGGCAA
AGGAGgtgcccttccttctcttccacttGTCGATTCCTCCTCGACTTAGA
GTGATGCACCACAACATGCGTCCTCTCGCATTCGTCTCTCATATCCCTTA
TGTATGTACAGCAGGAGTTGCAACGCCCAACGGGAAACCATCGCGCAAAC
CAGCTAGCGAAAAGGTGGCAGAACATAACCGACTGCTTCGTGACGCTCCA
CACGCAAACTCAACATACAGCCCCACCGCCCCAGGACTCAAAATGCTGCA
CGAAATGGCAGAGGAGGCTCTCGTCTTATTCCATAGAGGTAGTGCTGGAG
GACGTAAGGATCATCACGACGATGGCGATGGTGGGTGGCGGTCTCTAGCC
AATCCAACAACCCGTGATGGCGTCTATCGACGgagcctcttcccttccct
gtggcttgaagaggaggaagaggagcaggaggtggaacAGAGGGACACGT
GTGACAAAGAAATGACGCACGTGGAAGACAAAGTGGGCAGCGAAAGCGAC
GGAGAAGGCTCGAGCTTTGGTTTGATGGAAGCTTTGCCCCAAGACGCGGT
GCTCCACGTGTTGAGTATGTTGGAGGCTGAGGACATGGCACGTTTGGGGG
CGACTGGGAAAGACTTGCGAACGCGGGTGATGGGGAGCGAGGCGACCTGG
CCCTGGCTCCAAGTTTGCCTGCAGGCATGGAACCTCTCAACGACCACTCC
CTACGCCGCGCTTTGgacctcctcgcctctcccacccgccGCGGTCCTTT
CTCGCCTTTATCCCCTGATCGTCCCGTGGCCGGCGGAGATCGAAACGGCG
ACCCGAAAACCGTTACGCCGGACCCCATCGACGATGAGTTTGGAGGGAGC
ACGTCGGACGGGCGTGGGCTTCAAGGTGATGGGTCACCACAGGGTCCAAT
ACGTGGGAGAGGGTTTGGGAGCAGGGAACCGGGCGATCCGCTCCACGgtg
cctttcccctccctggaGAGtgtctgggagggaggaagggtccgaccgag
ggcgggaaggacggagggacagGACCAAGGGGCGAGAAAGGGCCAtgggg
aaggccggggcggggaagaaacCGTGTGGGCGCGTCTCTCTAGGCTCACG
CGTCAATTCcagcttccccctccccccgccctccctccctccctcgcggc
tgccgcggccgctgctgctgctgccatggcgggaggcggtggcaggGGAA
GTAATGAGGTGGGCAACAGACGTGGTGCACTTCCGTACGCGCAGctcttc
tccacctcggcccCAGCGGCTCTGTCGAGCTTCATGCTGGGCggggagcg
agaggaggaggagagggaggaggacgcagttgaagcgggaggggagggag
cagggggggaggcaggggccgaCAACGACGGCGCCCGCTTTGTgtcgtgg
ggggagggaggggagggaggttcggGGGGTGGGCTTCTTGGCCGGGGCTG
TGGGccgatggaggaagaagcccctccctccccttcgcccggGCCGTGCG
CGTTCTCGGCGGCTTgggtcaggaaggaggggaaggtgggggggggggag
acgggctggtggtggacgtggCGCCGCGTCTGGTGGGTTACTACGAGGTG
GCAATCATgctccgggaggaggaggaggacggaggggagggcaggcagcc
tcctcaccccccggGACCGGCCTTGCCCGTGGCGTTTGTGCCGACGccgg
tggtggaagggaacggggaagggggggaggaggaaggggaggaggacttc
tCGCTGCTCTttctggaagaagaagaagaagaggaggacgaagaggagga
cgaagaggaggaggaagaggaggaggaggaggaggaggaggaggacgggt
gggagcccccgcctccagggccggAGGCTCCTcacggccccgcccccctc
aaCCCCAGCAACAACTGCGTGGCCGTGGGGCTGGCCAGCGGAAACTTCCC
CTTGGAGGGCTACATGCCCGGGTGGGACGCGTCCTCCTACGCCTTCCACT
CGGACGACGGCGGCATCTTCCACGGCACCGGGATTAAGgtgcGGTACTAC
GGCTCGCCCTACGGCCCGGGTGACGTGGTAG back to top
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