rna7581, rna7581 (mRNA) Nannochloropsis gaditana

Overview
Namerna7581
Unique Namerna7581
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1957
Alignment locationCM002472.1:294952..295164 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100316g7.2359.mrna
Orig protein idgnl|cribi|Naga_100316g7.2359
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:294952..295164 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100316g7gene7338Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23116.1cds7561Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7581rna7581-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7581 ID=rna7581|Name=rna7581|organism=Nannochloropsis gaditana|type=mRNA|length=1957bp
TGCAATTGAAATTTTGACAACTAATTCTTTGGTAATAGTTAGGTTATAGA
ACCCCTGAAATATGGAACCTTGCTTAAAAAGTAAGGTTGATATAAAACTG
GGTGCGGTATCCCGGAGGTGACAAACCATGGCCCATATACCTTGTGTGAT
GTTAGACTGTGTCCGATCAAAGGTGTCGTGAATAATGGTTTTGTGTCATG
TATTTTGTGGCAGCATCCCAATCACCTGCTGAGGAGCCATTACAAGTCCA
TAATACCACCAGACTCCCTGACACTGGGTGTGAATACCCATAATACACAC
CGCTCAGATAAACAACTTTGGCGCGGCACTCGACATGAGGTGTAATGAGA
GCACTGGCAAAGCCAGCAAAAGCGTCAGCAGCTCATCAATACTCAGCCGC
CCAAGCGCGATCAAAGCTTGTCTCCGATGGGACTTAAAACCATGGCTTAT
CCTGGTGAGCACTGCTTGCATTATGCTGTGGTTGTCCGCAACACTAGTTC
CTACAGATTTGTACAAAAAGATTGCGCTGGCGCAAGTGAAAAAGAAGCCG
AAGCTTTTTCTTCACATCGGTGCACACAAGACGGGCTCTTCATACATCAA
ATATCAAATGATGCGATCGCGAGATTTCCTGCTGCAAAGAGGTATTATGT
TGCCTATGGGCTGTTATGGGGACACTAACTCTCCATCTTCTCTGTTTCGT
GCGGTTGCCATGCAACTTCAGGGCATGAAAATCCCAGAAGCGAAGAATTG
CCCTGAAAATCCTCTCGGCGACTTGACGAGGACTCTGGAATCAATCCATC
GAGACAACGATTCCCAAAATATCTTCATATCCAGCGAACATTTCGACAAT
CTCAACGATGAAATGGTGGCAGAAGTGACCAAACTTTTTTCGAATTTTCA
AACCACGGTGGTGCTTTACTACCGACGCAAGCAGGAACATCTCGTCAGCT
ACTACAGCGAGTTTGCCAAAAGGGCAGATCCGCTCAAGTCCCCCCTGCAC
CTGAGTGACTTTTTGTGGAACGTGATGGCGGAAGTAGACCCCGAGGCGGA
TGTGTCAGGTCCCCTGCCTAGCGTCCCTACTGCCAACGGGCGGAATCACA
TCCATGGCGTGTGCTACAAGCGTGTCCTAGAAACATACGGCAGACATTTT
GGTCCCGAGAACATGGTAGTGGTGCACTACAATGGCGTAATGGACGCTCA
GAAAGACCCCTGGGAAGTCCTGGTACGGGAAGTTATGATGCTGGAGATGG
GAAAGGAAGCGACGGCGGAGAAGGGCGCCAAAAGGAGCCTTCAGCAAGGG
AAAGGGGGGACAAAAATCAATGCCTCCCTGAACCCATTAACGTACTCCAC
CGCGGTTTTGTTTTATCGATGGCGTTGGGGCAACTTGAGGGGCCAAGTGA
ACTCGACCACGTCCGCGGCAGCATCCCCATCACCTGCCGAGGAGCCATCA
CAAATCGATAATACCACCAGACTCCCTGACACTGGATGCGTGAGTCGCTT
TCTAAAGCCTTTGGAGGACCTGCTGCCCAAGCAATGTTTCGATTTGAGAG
CGTTGGCTAGCCTGTGGGAGGCGCAAGAGCGGCAAAGTTTGAATGAGATG
GCGAGGAAGGGATCCCGATTGCTCTACTTTGATTGGGCCAAAGACGCTGC
CGGAGATATGCGCGTTGTCTTCAACGACGCGAACCCCTCCCTTCCATGCC
AGGTTCACCTGGAACAGCTTTTCGAAGAGCATGGTGAGAACGTCTTGAAG
ACTATCCCTGCTCGATTCTTGCCTGCTTTTGAGCAGGTGGCGGCGAAGGT
CGATGACAAATGCTGATAGACACAATGTATTATACAGAAAAGCCTTTAAA
TAGAAATAAAGTATCTGCAGGGTACAAGCAAATGTGCGAATTTTCTTGAA
TCTGCTATCATTTGTCGAAAGCAGCTATGACTTTTACGGGCAATTAAATA
ACAATGG
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protein sequence of rna7581

>rna7581-protein ID=rna7581-protein|Name=rna7581|organism=Nannochloropsis gaditana|type=polypeptide|length=70bp
MDALVFADCMRGGQVWRPVKLSCPATLVRLKSLIIHQKTIVKSCGCEMTK
AEIWHSTGHSGPCEMTKTEI
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mRNA from alignment at CM002472.1:294952..295164-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7581 ID=rna7581|Name=rna7581|organism=Nannochloropsis gaditana|type=mRNA|length=213bp|location=Sequence derived from alignment at CM002472.1:294952..295164- (Nannochloropsis gaditana)
ATGGATGCGTTAGTATTTGCGGACTGCATGCGCGGTGGCCAGGTCTGGCG
GCCTGTTAAACTTTCCTGCCCCGCAACACTTGTACGACTGAAAAGTTTAA
TAATACATCAAAAGACAATAGTCAAGTCTTGTGGTTGCGAGATGACCAAA
GCCGAAATTTGGCACTCCACAGGACATTCGGGGCCCTGCGAGATGACTAA
AACCGAAATTTAG
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Coding sequence (CDS) from alignment at CM002472.1:294952..295164-

>rna7581 ID=rna7581|Name=rna7581|organism=Nannochloropsis gaditana|type=CDS|length=213bp|location=Sequence derived from alignment at CM002472.1:294952..295164- (Nannochloropsis gaditana)
ATGGATGCGTTAGTATTTGCGGACTGCATGCGCGGTGGCCAGGTCTGGCG
GCCTGTTAAACTTTCCTGCCCCGCAACACTTGTACGACTGAAAAGTTTAA
TAATACATCAAAAGACAATAGTCAAGTCTTGTGGTTGCGAGATGACCAAA
GCCGAAATTTGGCACTCCACAGGACATTCGGGGCCCTGCGAGATGACTAA
AACCGAAATTTAG
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Synonyms
Publications