|
|
Properties
| Property Name | Value |
|---|
| Product | fmu domain-containing protein |
| Orig transcript id | gnl|cribi|Naga_100316g2.2360.mrna |
| Orig protein id | gnl|cribi|Naga_100316g2.2360 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:283571..286989 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7576 ID=rna7576|Name=rna7576|organism=Nannochloropsis gaditana|type=mRNA|length=621bp
ATGGCCTACAAGAGGAGCCATTACCACCCCACACGCCTCAGCAGTAACGA
GGAGGATGAAGACACGGTGTATTTTACACCCTTGGGCGCAGCCAAAGAAG
TCGGTCGCTCCTGTTTAATCCTCCGCTACAAAGGGAGGACCATCATGTTG
GACTGCGGCATCCACCCAGGCCGCACTGGCGACGACGCCCTCCCTTTCTT
TGACAGCGGTCCTGACGCGGAAGAAATCGACATCATCCTCATCTCGCACT
TTCACTTGGACCATGCTGCGTCATTGCCATATTTCACGGAGAAGGTCCAA
GGTGGGGCGTTTAAGGGCAGGATCTTTGCCACGCATCCGACTAAAGCCAT
TATGAGGCTGATGCTCCAGAACCACATCCGGACGGACTCGGTTCGTTTAG
CTGCCGATGGGACCAGTGCAGACGAGGGGGCGGAGGCGCCCTTGTACACG
GAGGAGGAGCTGCAGGCGGGGGCTCCTCAAGATCATGGGTGCTCTTCGAT
ACGGATTTCCAACAATAAAGAGCTGGCTGTCTGCTGCGTTAAGGAACACC
TTAAAAGCCCTCAGCCCTCCTCCTGGGCCTGGGCGCGTGGAGCATCGGGG
CGTCAAGTTCTGGTGCTATAA back to topprotein sequence of rna7576 >rna7576-protein ID=rna7576-protein|Name=rna7576|organism=Nannochloropsis gaditana|type=polypeptide|length=662bp
MRRQVGLSTALCCCLLASVIDQSTGAGERTRRSFSSAAFAPPIRPTSSPV
PPPSQPSSATPSTPPSSPIVSSAGASTSRRGERRSFMSSSTLALSPPVSS
TTTSSTSSSSSTVSSSGSSSPVLEPEQAIALSAQVDGPISSQPSPSSSLS
SPPAPSSPSTASSSSPSAPPTMTMDPFRPARAAVDPVVINILVTILSSSA
ASSPPSTLADAERIANKAIRKRMRTDAPETALTAEERRLIYARVYGVEVL
RARLSFLLEHAVAQSSLVGRRFGPTLADFGLPMDASGDPMLVVNRAECLL
ALYMLTEEVDGEGRPPRVDFLDSDRLEVLGAVSREGMTEGEREALFDQVD
DPSERLAARRSLPSWLAARFLEQLGKEGAEALALALNRKPPTTLRVNTLK
TSREKVVQELKKRGVPAAATKYSPWGVTVGDVEGGFRVFEQDMYKLGYVD
LINEASQCVALSTGAKPYDIVLLYGARKGAKALALGSMLRGNGMIYLWEP
YLRQHYQLREAIRRGQAQDLMEVLPNVMAAMRIKADVVLVDALCSNTGAL
SHHPSMRWLKNETHILETLVPQQRSDLQNAARAVSPGGVLLYSTCSLLAC
ENQEVVAWFESTFSGEFEPLPFDKTGGPGGNCRALLPHVHGVDGTFIARW
RRKLGSAGVVSG back to topmRNA from alignment at CM002472.1:283571..286989- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7576 ID=rna7576|Name=rna7576|organism=Nannochloropsis gaditana|type=mRNA|length=3419bp|location=Sequence derived from alignment at CM002472.1:283571..286989- (Nannochloropsis gaditana)
CATTGACTTGGCAAAACAAAGAGCTACGCGCTTCTATCGTGGGTCATGGA
GGGCAAAGCCGTGGGAGTTGGCTGCGCGGCTTCCGTGCACTTAAAGCTGC
TTGCTGACGGTCTGCTTCCTATACGCATGCGGCGTCATTACCTTTGGCCC
GTCTCCACCTTCTACTCCGCTACAGTTGTCAATTACTCACCTTTCTCACC
CACATTCCCCCACAACGATTCAGACAAAGAGGAGCAGCCGCGCCCCTGGA
GTCTACATGAAAGCCTAGACTTGGTCAGACAACATCAGCGTCTCTTCACC
TCCCTCTTGCAGCTCCTGCCCCCGCGTCGCAAGGCCCTATTTTGTGGATC
AGACTTCTCCCTGGTGACAGATCACAGCACCTCACGCGGCACACACTGAA
AAAGAGATGCGACGTCAGGTTGGGCTGTCCACTGCCTTGTGCTGTTGCCT
GTTGGCCAGCGTAATAGATCAGAGCACAGGTACGTGGCAATAAACGAGTA
TGCCTGAAGCTCCTTGATAAAGTTTGTATGCATGCTTTTAGGGTAGCAAG
AACGCTTGTGATACTCGTTTTCTCCCACCGATGTCGCTGCGCCCACTTAA
TATCTCCTGGCCCGACCTTAGGTGCCCTTCCTCCCTCTCTCTTCGCTGTC
TGTCCTCTGACCTCGCTGTTGTTTCCGTATTTTTCTATGAACCAATACAG
GAGCAGGAGAAAGAACAAGGAGGAGCTTTTCATCGGCAGCATTTGCGCCA
CCAATACGGCCGACTTCCTCCCCTGTTCCTCCGCCCTCCCAGCCCTCCTC
CGCCACTCCCTCCACCCCCCCCTCGTCCCCCATCGTCTCTAGCGCAGGCG
CTTCCACTTCAAGAAGAGGCGAAAGAAGATCCTTCATGTCTTCTTCCACG
CTGGCGTTGAGCCCTCCTGTCTCCTCCACCACCACCAGCAGTACCAGTAG
CAGCAGTAGCACCGTCAGTAGCAGCGGCAGCAGCAGTCCTGTGTTGGAGC
CTGAGCAGGCCATCGCCTTATCTGCCCAAGTGGACGGACCGATCTCATCC
CAGCCTTCTCCGTCCTCCTCCCTCTCCTCCCCCCCCGCCCCTTCCTCTCC
CTCCACCGCTTCCTCCTCTTCACCCTCCGCCCCTCCCACCATGACTATGG
ATCCTTTCCGGCCTGCCCGTGCCGCCGTCGATCCGGTCGTCATCAACATC
CTTGTCACTATTCTCTCCTCCTCTGCCGCCTCCTCCCCGCCCTCCACCCT
CGCAGACGCGGAGAGAATCGCCAACAAGGCCATCCGAAAGCGCATGCGCA
CGGATGCCCCGGAGACCGCTTTGACTGCGGAGGAACGTCGCTTGATCTAT
GCCCGTGTTTACGGTGTGGAGGTCTTGCGTGCCCGGCTTTCTTTCCTCTT
GGAACACGCCGTGGCGCAATCCAGTCTGGTGGGCCGACGTTTTGGGCCGA
CGTTGGCGGACTTCGGCCTTCCCATGGACGCGTCCGGGGACCCGATGCTG
GTGGTGAACCGGGCGGAGTGCCTGTTGGCCTTGTACATGCTGACCGAGGA
GGTGGACGGGGAGGGACGGCCGCCGCGGGTGGACTTTTTGGACTCGGACC
GGCTCGAGGTGTTGGGGGCGGTGAGTCGGGAAGGGATGACGGAGGGGGAA
CGAGAAGCCCTGTTCGACCAGGTGGACGACCCGTCGGAGAGATTGGCCGC
GCGCCGCTCCCTCCCGTCCTGGCTGGCAGCTCGTTTCCTGGAACAATTGG
GCAAGGAGGGGGCGGAAGCCTTGGCCCTGGCGTTGAACCGAAAACCCCCG
ACCACTTTGCGGGTGAACACACTCAAGACGAGCCGGGAGAAAGTAGTCCA
GGAGCTCAAGAAGCGCGGCGTACCTGCCGCCGCCACCAAGTATTCCCCCT
GGGGCGTGACGGTCGGGGACGTGGAAGGGGGTTTCCGTGTCTTCGAGCAG
GACATGTACAAGCTTGGCTATGTGGACCTGATCAACGAGGCGAGCCAGTG
CGTGGCGCTGTCGACGGGGGCGAAACCCTACGACATCGTCCTCCTGTACG
GAGCCCGGAAGGGCGCAAAAGCCCTGGCTTTGGGGAGCATGCTGCGGGGC
AACGGGATGATCTACTTGTGGGAGCCTTACTTGCGGCAACACTACCAACT
TCGCGAGGCCATCCGCCGGGGCCAGGCACAGGACTTGATGGAGGTGCTGC
CCAACGTGATGGCGGCCATGCGGATCAAGGCGGACGTGGTGCTGGTCGAT
GCCCTCTGCAGCAACACGGGGGCCCTCTCCCACCATCCGTCCATGCGCTG
GCTCAAGAATGAGACGCACATCTTGGAGACCTTAGTGCCCCAACAGCGTT
CCGATCTGCAGAACGCTGCCCGGGCCGTGAGTCCCGGGGGGGTCTTGCTC
TACAGCACCTGCTCCCTCCTCGCCTGCGAGAACCAGGAGGTGGTGGCCTG
GTTTGAAAGCACATTCTCGGGGGAGTTTGAGCCCTTGCCCTTCGACAAGA
CGGGGGGACCGGGCGGGAACTGCCGGGCCCTGCTTCCCCACGTGCACGGG
GTGGACGGCACCTTTATCGCCCGATGGCGGCGGAAGCTCGGGTCTGCGGG
GGTAGTCTCGGGATGAGACGGAAACGTAGGAGAAAGCGTGGAGGGGAAGG
GGGGGGGTGGTGGTGGTGTGGTGAGGTGACAGGCCTTTGATGATATGGCA
AGATGACAGGAGGAAATCAAGGAGAGGAGGGGCGCGCCTGATCCATGGGC
AGGGGAGGAGGCTGCCCGACCTCGCAGGGGGGGGGCGTGAGAAGGAGCAT
CAAGTCGCAAATACCGAGGAGTGCAGGCGTATGCTGGGTGAATCCGAGTG
TATATGTCCCTGCGTGTTCAGTGAATGCTGTTCGTGGGAGTGGGACTCGG
GGGGGGGGAGGGGCAATGGGTGGAGTCGGAGGAGGAGGAGGCAGATATTT
TCGCGTGTGGAACTCGATCTCTGTGGCATAAGTGAAAGGCGACATGCCCG
CCAAAGCGGCTGCATAGGCCACATTTTCGGAATGATGAAGAGCGCCGGGA
GGGGGAATAAGGAGGAAAGGAGATGGTGAACGATAGGAAATAGGATAGAG
TAGGAAAGGGACTGGGACGTCCATAGAGGCGCCCTATATTTGAATCGTAT
AATCATTCTCTGCAAGAAGTGTACGCATGGCGAGCAACACGAGATGATAC
CTCTCACTGGTACTTCTCATCTCTCAAGAGGGGAAATGGCGTGTTTTAGC
TTAGAAATCATCAATCCCTCACTTTTATTGAGGGAGCACAGCAACTCCCT
CGGTCGTCCCGGCGATGGGTACAGAGGTATGACCATGAGCATTATAGAAG
AAAAGGCGAAGATATAAAAGACACGCAAAAAAGGAACTAATGAAAATTTA
CAATATAGATGAGGTGAAC back to topCoding sequence (CDS) from alignment at CM002472.1:283571..286989- >rna7576 ID=rna7576|Name=rna7576|organism=Nannochloropsis gaditana|type=CDS|length=3978bp|location=Sequence derived from alignment at CM002472.1:283571..286989- (Nannochloropsis gaditana)
GAGCAGGAGAAAGAACAAGGAGGAGCTTTTCATCGGCAGCATTTGCGCCA
CCAATACGGCCGACTTCCTCCCCTGTTCCTCCGCCCTCCCAGCCCTCCTC
CGCCACTCCCTCCACCCCCCCCTCGTCCCCCATCGTCTCTAGCGCAGGCG
CTTCCACTTCAAGAAGAGGCGAAAGAAGATCCTTCATGTCTTCTTCCACG
CTGGCGTTGAGCCCTCCTGTCTCCTCCACCACCACCAGCAGTACCAGTAG
CAGCAGTAGCACCGTCAGTAGCAGCGGCAGCAGCAGTCCTGTGTTGGAGC
CTGAGCAGGCCATCGCCTTATCTGCCCAAGTGGACGGACCGATCTCATCC
CAGCCTTCTCCGTCCTCCTCCCTCTCCTCCCCCCCCGCCCCTTCCTCTCC
CTCCACCGCTTCCTCCTCTTCACCCTCCGCCCCTCCCACCATGACTATGG
ATCCTTTCCGGCCTGCCCGTGCCGCCGTCGATCCGGTCGTCATCAACATC
CTTGTCACTATTCTCTCCTCCTCTGCCGCCTCCTCCCCGCCCTCCACCCT
CGCAGACGCGGAGAGAATCGCCAACAAGGCCATCCGAAAGCGCATGCGCA
CGGATGCCCCGGAGACCGCTTTGACTGCGGAGGAACGTCGCTTGATCTAT
GCCCGTGTTTACGGTGTGGAGGTCTTGCGTGCCCGGCTTTCTTTCCTCTT
GGAACACGCCGTGGCGCAATCCAGTCTGGTGGGCCGACGTTTTGGGCCGA
CGTTGGCGGACTTCGGCCTTCCCATGGACGCGTCCGGGGACCCGATGCTG
GTGGTGAACCGGGCGGAGTGCCTGTTGGCCTTGTACATGCTGACCGAGGA
GGTGGACGGGGAGGGACGGCCGCCGCGGGTGGACTTTTTGGACTCGGACC
GGCTCGAGGTGTTGGGGGCGGTGAGTCGGGAAGGGATGACGGAGGGGGAA
CGAGAAGCCCTGTTCGACCAGGTGGACGACCCGTCGGAGAGATTGGCCGC
GCGCCGCTCCCTCCCGTCCTGGCTGGCAGCTCGTTTCCTGGAACAATTGG
GCAAGGAGGGGGCGGAAGCCTTGGCCCTGGCGTTGAACCGAAAACCCCCG
ACCACTTTGCGGGTGAACACACTCAAGACGAGCCGGGAGAAAGTAGTCCA
GGAGCTCAAGAAGCGCGGCGTACCTGCCGCCGCCACCAAGTATTCCCCCT
GGGGCGTGACGGTCGGGGACGTGGAAGGGGGTTTCCGTGTCTTCGAGCAG
GACATGTACAAGCTTGGCTATGTGGACCTGATCAACGAGGCGAGCCAGTG
CGTGGCGCTGTCGACGGGGGCGAAACCCTACGACATCGTCCTCCTGTACG
GAGCCCGGAAGGGCGCAAAAGCCCTGGCTTTGGGGAGCATGCTGCGGGGC
AACGGGATGATCTACTTGTGGGAGCCTTACTTGCGGCAACACTACCAACT
TCGCGAGGCCATCCGCCGGGGCCAGGCACAGGACTTGATGGAGGTGCTGC
CCAACGTGATGGCGGCCATGCGGATCAAGGCGGACGTGGTGCTGGTCGAT
GCCCTCTGCAGCAACACGGGGGCCCTCTCCCACCATCCGTCCATGCGCTG
GCTCAAGAATGAGACGCACATCTTGGAGACCTTAGTGCCCCAACAGCGTT
CCGATCTGCAGAACGCTGCCCGGGCCGTGAGTCCCGGGGGGGTCTTGCTC
TACAGCACCTGCTCCCTCCTCGCCTGCGAGAACCAGGAGGTGGTGGCCTG
GTTTGAAAGCACATTCTCGGGGGAGTTTGAGCCCTTGCCCTTCGACAAGA
CGGGGGGACCGGGCGGGAACTGCCGGGCCCTGCTTCCCCACGTGCACGGG
GTGGACGGCACCTTTATCGCCCGATGGCGGCGGAAGCTCGGGTCTGCGGG
GGTAGTCTCGGGATGAATGCGACGTCAGGTTGGGCTGTCCACTGCCTTGT
GCTGTTGCCTGTTGGCCAGCGTAATAGATCAGAGCACAGGAGCAGGAGAA
AGAACAAGGAGGAGCTTTTCATCGGCAGCATTTGCGCCACCAATACGGCC
GACTTCCTCCCCTGTTCCTCCGCCCTCCCAGCCCTCCTCCGCCACTCCCT
CCACCCCCCCCTCGTCCCCCATCGTCTCTAGCGCAGGCGCTTCCACTTCA
AGAAGAGGCGAAAGAAGATCCTTCATGTCTTCTTCCACGCTGGCGTTGAG
CCCTCCTGTCTCCTCCACCACCACCAGCAGTACCAGTAGCAGCAGTAGCA
CCGTCAGTAGCAGCGGCAGCAGCAGTCCTGTGTTGGAGCCTGAGCAGGCC
ATCGCCTTATCTGCCCAAGTGGACGGACCGATCTCATCCCAGCCTTCTCC
GTCCTCCTCCCTCTCCTCCCCCCCCGCCCCTTCCTCTCCCTCCACCGCTT
CCTCCTCTTCACCCTCCGCCCCTCCCACCATGACTATGGATCCTTTCCGG
CCTGCCCGTGCCGCCGTCGATCCGGTCGTCATCAACATCCTTGTCACTAT
TCTCTCCTCCTCTGCCGCCTCCTCCCCGCCCTCCACCCTCGCAGACGCGG
AGAGAATCGCCAACAAGGCCATCCGAAAGCGCATGCGCACGGATGCCCCG
GAGACCGCTTTGACTGCGGAGGAACGTCGCTTGATCTATGCCCGTGTTTA
CGGTGTGGAGGTCTTGCGTGCCCGGCTTTCTTTCCTCTTGGAACACGCCG
TGGCGCAATCCAGTCTGGTGGGCCGACGTTTTGGGCCGACGTTGGCGGAC
TTCGGCCTTCCCATGGACGCGTCCGGGGACCCGATGCTGGTGGTGAACCG
GGCGGAGTGCCTGTTGGCCTTGTACATGCTGACCGAGGAGGTGGACGGGG
AGGGACGGCCGCCGCGGGTGGACTTTTTGGACTCGGACCGGCTCGAGGTG
TTGGGGGCGGTGAGTCGGGAAGGGATGACGGAGGGGGAACGAGAAGCCCT
GTTCGACCAGGTGGACGACCCGTCGGAGAGATTGGCCGCGCGCCGCTCCC
TCCCGTCCTGGCTGGCAGCTCGTTTCCTGGAACAATTGGGCAAGGAGGGG
GCGGAAGCCTTGGCCCTGGCGTTGAACCGAAAACCCCCGACCACTTTGCG
GGTGAACACACTCAAGACGAGCCGGGAGAAAGTAGTCCAGGAGCTCAAGA
AGCGCGGCGTACCTGCCGCCGCCACCAAGTATTCCCCCTGGGGCGTGACG
GTCGGGGACGTGGAAGGGGGTTTCCGTGTCTTCGAGCAGGACATGTACAA
GCTTGGCTATGTGGACCTGATCAACGAGGCGAGCCAGTGCGTGGCGCTGT
CGACGGGGGCGAAACCCTACGACATCGTCCTCCTGTACGGAGCCCGGAAG
GGCGCAAAAGCCCTGGCTTTGGGGAGCATGCTGCGGGGCAACGGGATGAT
CTACTTGTGGGAGCCTTACTTGCGGCAACACTACCAACTTCGCGAGGCCA
TCCGCCGGGGCCAGGCACAGGACTTGATGGAGGTGCTGCCCAACGTGATG
GCGGCCATGCGGATCAAGGCGGACGTGGTGCTGGTCGATGCCCTCTGCAG
CAACACGGGGGCCCTCTCCCACCATCCGTCCATGCGCTGGCTCAAGAATG
AGACGCACATCTTGGAGACCTTAGTGCCCCAACAGCGTTCCGATCTGCAG
AACGCTGCCCGGGCCGTGAGTCCCGGGGGGGTCTTGCTCTACAGCACCTG
CTCCCTCCTCGCCTGCGAGAACCAGGAGGTGGTGGCCTGGTTTGAAAGCA
CATTCTCGGGGGAGTTTGAGCCCTTGCCCTTCGACAAGACGGGGGGACCG
GGCGGGAACTGCCGGGCCCTGCTTCCCCACGTGCACGGGGTGGACGGCAC
CTTTATCGCCCGATGGCGGCGGAAGCTCGGGTCTGCGGGGGTAGTCTCGG
GATGAATGCGACGTCAGGTTGGGCTGTCCACTGCCTTGTGCTGTTGCCTG
TTGGCCAGCGTAATAGATCAGAGCACAG back to top
|