rna757, rna757 (mRNA) Nannochloropsis gaditana

Overview
Namerna757
Unique Namerna757
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2973
Alignment locationCM002456.1:352809..354419 -

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Properties
Property NameValue
Productglutaredoxin 3
Orig transcript idgnl|cribi|Naga_100035g19.3361.mrna
Orig protein idgnl|cribi|Naga_100035g19.3361
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:352809..354419 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100035g19gene726Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna757rna757-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29897.1cds757Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna757 ID=rna757|Name=rna757|organism=Nannochloropsis gaditana|type=mRNA|length=2973bp
ACACACCCACCAACGATATTCATCCTGATATGACCTGCAAATTTTAATCA
TTCTTTTTAAACATAGTATGCCTTCATCGTTATTAACTAGGATTAAATCC
GGGGGTTGGGAACTTTTATCTAATAACCTCCTCCCACCCTCGGGGCTAGG
CTACCCTATTGAAGCCTCGAAATGCTTACAGGTGATTATGGAGGCAAAAA
ATAAGAACGCACGGAAGGACCAATGTGCTAAGTCAATGAGTGTGAACAAA
AATGCGGAGATCCATTCCCACCGTGACCTTTCTGTCCTCCACGCCGCCCT
GGAGCAGCAATATGGCGACGGTATCATCCCTTTGTCCGCATTAAGTATGC
TGAGACGATGGGCACTCGCGTTAGGGCGTCCATGTAGCAAGCATATCAAC
AATTTGTCCAAGAGAGTTGCGCACGTGCTGAAACAAACCTCACACTCTCC
AAGCCTACGTGCCGAGATCGAGCAAGAGCTACTTTATGAGGTGGAAGCTC
AAGACAGTCCTTTGCAGTACATGTACAATATTCCAAAAGTCTCATTCACC
TCCCAGCCCGAGCAAAACTTCAAGATATTATGTTGTAATAGAAACAATGA
CCTAAGGCATTTCTCCGATTCCCAGCACTACACAAGATCACGAGCATTTT
ACGCACGGCAGAATGCAAGGGCCTTCGAGACCACTGTGCCGTGTGGGGTC
ACAACCAATGCATTCATCGTCGATGCCTACGCACGCTGCATTCAAGCTTA
CCTTGCAGACATCCGTCATTGCTACGACAATATCGACGTCTCTGACAGAG
CACATATCATGGATGTCGGGAACCGCACGTGCCACCGTGGAGAAACGGCC
GAACAAAAGCATGGGCCGGGTGATGTGAAGACGAAGAGGTGTACAACTGC
CTCAAGTGCCAAGACTGATGACTCAAGAAGCCGGAACAAAGTTTACGTCA
TTGAGCTTGCTGCCGGTCACTGCCTTTTTGGCTACTTACTGGCTAAACGT
CTCCACCAAGCCCAGGAAGAGGGCGCTGTGCCTTCTTCGTGGTCGATCTG
TATTCTCCTCACTGATTTTAATCATGCAATACTTAAAAGCCGCATGGAGA
TGCCATGGATGAAGCCCTTCATTGCAGCGGGTCTCGTGGAGTTTGCGGTG
CTGGATGCCGCCTCAGCTGGTGCGAGCGGGCCGACGGAACAGGAAGGGGA
AGAAGGGAGGGAGAGGGTAGAACCCGGATCTCTTTTGCTGATGGGTGAGA
CCAAGCGGTGGATACCCGCAGGAAGCTTGCTTGGACCTGTCTTCATAATT
GGTAATTATGCCCTGGATTCCTTCCCCGTGGACGTGTTCATGTCCGGGCA
GACAGGAGTATTGGACGAGGTGTGCGCGGAAGGCGGGGGCGGGCGGCTGC
GGCTCGTGCCTGTGCCTTTGACAGCCACGAGCGAAAGGGTAGCGGATGGA
TATCCCTACCAACCACTTGTTCGCGCCCTGGTCGAGGAAAGGGAGGGAGG
AGTGCTCCATATGATCAACGTTGGGTTTATTCGAATACTAGAGCAAATTC
GCAGCTTGTTACACCCGCGGCATAAAGGGCACATCGCTGCTTTGGCGGCG
GATGCGACCTTCCAATTCGACGATCCTGTATGGCGCGTGGAGCAGGCAGG
GTCGGAAGGTTCGAAGGTCTTGGATGGAATAGAAGAAGGAGACAGGAGGG
GATTGGCTGGGCGGGTGAGCGAGACCATAGTACAGAAAACCCGAGGAAGA
GTTCACGAGGTGACAAAATGGCAGGATGGAGAAAAGGCGACACAGCATCG
TGTGGCACCTTCTTCTGACTACGGCGGGGACCGGAAGACCTTACAGCGGC
CTCCGTCCATCGAACTGCCCGACATAAGCCCAGGATCGGGCAGCGGGTGT
TTCGCTCTGGCGGTGGATCCTCAGACCATCGTGTCCGCCGTGCTGTGGAC
GTTCCAAGGCCTGGGGGAGGGGGACGGGAGGCGGGGAGAGGAAAGGGTCG
AGTGGTTGGCAGTGCGCAACACGCTCCTAGAAGGCGGGTTAGCCGTGACT
CTGGTGGCAACGAAGGCAGCAGAGGAAGACGAGGTGCATACCACGGGAAA
TGTAGCCTTGTCCCGAACAAGAGAGGCGTTTTGGAGGCATCTTTGCCTGC
AAAATCCCACCGACTATGAACACATTCAAGGGCTTATGCTTGAGGAGCAC
GATGCGTTAAAAAAGGATGGCCGCGAATGCCGAAGCCTTGTGTCATCCCT
GGGACTGCAAGGGATGCTTGCCTTGCTGCGGTGGTCTGGCTACGACTTCG
ACTTGTTTTGGATCCTTCGGTGGTATCTCCGAGATGCCATGCTGCAACAT
TGCTCTCTTGATCGTCAGTTGGGTGCGGGGCGCTTATTCACAGACGAAAC
CATGAAGAAGTGCGTGCTTGTCGTTGCGGATGTTGCACTTCGTTGCCTTT
TTAACTGTACGGCTTTGACTGCGCGAGCGTGGGCCTTGTCGCGGTATCGG
GGGCTGCAATTTCTCTACGCTTTAGGCTGTTACAGGGAGGCAGTGGAGTT
TTTTATGTACCGTTGCAGAGGGGATATCTCACCCTTGAAACTTTCGACCA
GCTCGATCGATTTATGGAGAGATAAATTCTGCGATGAATTCGGAAGCGCG
GCTGAGGCCTTTCTGATCGCCCTTTGCTTGGATAAGCTACCTTGTACAAG
TAAAAGTGTTCGTCAGCTTTTGCTGTGTACCACGCACGGAGCAAGGTTTC
GGGATAGTAAAGGACTACAACGAGTCACCAAATACCTACACAAGCATGAT
CTTAATGCTTACGGCGGCTTGTGAAATAAGTACAGCAAGAAAGCGCAAGA
GTACGTGTTGGTAAATTACAAAGTGAAAATAACGAAAAAGAGCATTTTTA
CCATCCAAAGATTGGAACAAGATACACAAAAATAGAACCTATCAAAGAAA
AATGTATTAGTAGGAGTAAAATA
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protein sequence of rna757

>rna757-protein ID=rna757-protein|Name=rna757|organism=Nannochloropsis gaditana|type=polypeptide|length=366bp
MTANGAREVIDVMSKAQWDTLLKDDFPTVAFFWADWHEPSKPQGQMDSVF
THLAALHPSLRFLRVEAEAVPEVSVLFGISVVPSFVFFQKGKVADKQEGA
HPAELAKKIQSLSAAAAALSTRTGNSDAVLVAANATTVKETASGSTGGLN
HRLKALITQAPVVLFMKGSSSNPRCGFSRSMVELLKTEKIAFASFDILQD
DEVRQGLKDYSDWKTYPQLYVNGELVGGLDIVKEMVVEGASGRLKEALGI
KELPESDAASPADDVNPLETRLKALVNAAPVMLFMKGDPAAPKCGFSNQM
VSILKKTGVAFQSFDILQDEEVRQGLKKISQWPTYPQLYVKGELVGGLDI
VKEMEEGGELDSALKG
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mRNA from alignment at CM002456.1:352809..354419-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna757 ID=rna757|Name=rna757|organism=Nannochloropsis gaditana|type=mRNA|length=1611bp|location=Sequence derived from alignment at CM002456.1:352809..354419- (Nannochloropsis gaditana)
CGTGGCGTTCTTTCATTATGCTCACAACCACAGAAACCACAGCATTGTAT CTTAAGGGTCAGAATGACGGCAAATGGCGCGAGGGAGGTGATAGATGTGA TGTCCAAGGCCCAATGGGACACACTTCTAAAAGGTAAAGCGATGATGATA ATACATTTTTTGACGTTTCCGGAACAAGTATACTTATGGCCTGGAATGAG GCATGCTCACGCGATAGAGCCATTGAGTATAGGCGGAAAGTAACTCAAGA CGCTGTGTTACCATGATTTATTCTGTCTTTCTTTGTCTTGTGCTGAGAAT CGGGCTCCCTCCCAAACTCATTCCACAAACCTCCTTTTTCCTCTCTGTCC CTCACACTAGATGATTTCCCGACTGTAGCCTTCTTTTGGGCAGACTGGCA CGAGCCGTCGAAACCACAAGGACAAATGGATTCTGTTTTCACGCATTTGG CGGCTCTGCATCCATCCTTGCGATTCCTGCGCGTCGAAGCCGAGGCCGTC CCCGAAGTCTCTGTCCTCTTTGGGATATCCGTAGTCCCAAGTTTCGTCTT CTTCCAGAAAGGAAAGGTCGCAGACAAGCAAGAAGGGGCCCACCCTGCGG AATTAGCCAAGAAAATTCAGAGTCTCAGCGCGGCTGCGGCTGCTTTGTCC ACGCGCACGGGCAACAGTGACGCCGTGCTCGTGGCTGCCAACGCGACGAC GGTCAAGGAAACGGCGTCGGGCAGCACTGGGGGTTTGAACCATCGATTGA AAGCGCTGATCACGCAGGCCCCTGTGGTCCTCTTCATGAAAGGCTCCTCT TCCAATCCTCGCTGCGGCTTTTCCCGGTCCATGGTCGAGCTCCTGAAGAC GGAGAAGATTGCGTTTGCATCCTTCGACATATTGCAAGACGATGAGGTGA GGCAAGGACTCAAGGATTACTCGGACTGGAAAACGTATCCGCAGCTGTAC GTCAACGGTGAGCTGGTGGGGGGGCTGGACATTGTCAAGGAGATGGTGGT GGAGGGAGCGTCCGGGCGCTTGAAAGAGGCCTTGGGCATCAAGGAACTTC CCGAGTCGGATGCGGCGTCTCCTGCCGACGATGTCAACCCTCTGGAGACG CGCCTAAAGGCTCTCGTCAATGCGGCTCCCGTCATGCTCTTCATGAAGGG AGACCCCGCGGCTCCCAAGTGTGGATTTAGCAACCAAATGGTCAGCATCT TGAAGAAAACAGGCGTGGCGTTTCAAAGCTTTGACATCTTGCAAGACGAG GAGGTGAGGCAAGGACTGAAAAAAATCTCGCAGTGGCCGACGTACCCTCA GCTGTACGTGAAGGGCGAGCTGGTGGGAGGGCTGGATATTGTCAAGGAGA TGGAGGAAGGAGGGGAGCTCGATAGTGCTCTAAAGGGGTGATAAGACTGG GCGAGGGGCACGCCACGGACATGCATGCGAAATGCGTCAAGCTGAAAGAA ATCATGGCTGGAAAAATTCCTTCCAGGGGTCGCGGCTTCGCGAAGTTCTC CATTTTACTTTCTCATTTGCCCTGTTTATGTGCTTATGAAGTCGGTACCA GGCAAGGAGGCCTGAAGACAGCTATGGAGGACCTCCTGTAATGCCACCAT CCAGCCTGTCT
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Coding sequence (CDS) from alignment at CM002456.1:352809..354419-

>rna757 ID=rna757|Name=rna757|organism=Nannochloropsis gaditana|type=CDS|length=2202bp|location=Sequence derived from alignment at CM002456.1:352809..354419- (Nannochloropsis gaditana)
ATGATTTCCCGACTGTAGCCTTCTTTTGGGCAGACTGGCACGAGCCGTCG
AAACCACAAGGACAAATGGATTCTGTTTTCACGCATTTGGCGGCTCTGCA
TCCATCCTTGCGATTCCTGCGCGTCGAAGCCGAGGCCGTCCCCGAAGTCT
CTGTCCTCTTTGGGATATCCGTAGTCCCAAGTTTCGTCTTCTTCCAGAAA
GGAAAGGTCGCAGACAAGCAAGAAGGGGCCCACCCTGCGGAATTAGCCAA
GAAAATTCAGAGTCTCAGCGCGGCTGCGGCTGCTTTGTCCACGCGCACGG
GCAACAGTGACGCCGTGCTCGTGGCTGCCAACGCGACGACGGTCAAGGAA
ACGGCGTCGGGCAGCACTGGGGGTTTGAACCATCGATTGAAAGCGCTGAT
CACGCAGGCCCCTGTGGTCCTCTTCATGAAAGGCTCCTCTTCCAATCCTC
GCTGCGGCTTTTCCCGGTCCATGGTCGAGCTCCTGAAGACGGAGAAGATT
GCGTTTGCATCCTTCGACATATTGCAAGACGATGAGGTGAGGCAAGGACT
CAAGGATTACTCGGACTGGAAAACGTATCCGCAGCTGTACGTCAACGGTG
AGCTGGTGGGGGGGCTGGACATTGTCAAGGAGATGGTGGTGGAGGGAGCG
TCCGGGCGCTTGAAAGAGGCCTTGGGCATCAAGGAACTTCCCGAGTCGGA
TGCGGCGTCTCCTGCCGACGATGTCAACCCTCTGGAGACGCGCCTAAAGG
CTCTCGTCAATGCGGCTCCCGTCATGCTCTTCATGAAGGGAGACCCCGCG
GCTCCCAAGTGTGGATTTAGCAACCAAATGGTCAGCATCTTGAAGAAAAC
AGGCGTGGCGTTTCAAAGCTTTGACATCTTGCAAGACGAGGAGGTGAGGC
AAGGACTGAAAAAAATCTCGCAGTGGCCGACGTACCCTCAGCTGTACGTG
AAGGGCGAGCTGGTGGGAGGGCTGGATATTGTCAAGGAGATGGAGGAAGG
AGGGGAGCTCGATAGTGCTCTAAAGGGGTGAATGACGGCAAATGGCGCGA
GGGAGGTGATAGATGTGATGTCCAAGGCCCAATGGGACACACTTCTAAAA
GATGATTTCCCGACTGTAGCCTTCTTTTGGGCAGACTGGCACGAGCCGTC
GAAACCACAAGGACAAATGGATTCTGTTTTCACGCATTTGGCGGCTCTGC
ATCCATCCTTGCGATTCCTGCGCGTCGAAGCCGAGGCCGTCCCCGAAGTC
TCTGTCCTCTTTGGGATATCCGTAGTCCCAAGTTTCGTCTTCTTCCAGAA
AGGAAAGGTCGCAGACAAGCAAGAAGGGGCCCACCCTGCGGAATTAGCCA
AGAAAATTCAGAGTCTCAGCGCGGCTGCGGCTGCTTTGTCCACGCGCACG
GGCAACAGTGACGCCGTGCTCGTGGCTGCCAACGCGACGACGGTCAAGGA
AACGGCGTCGGGCAGCACTGGGGGTTTGAACCATCGATTGAAAGCGCTGA
TCACGCAGGCCCCTGTGGTCCTCTTCATGAAAGGCTCCTCTTCCAATCCT
CGCTGCGGCTTTTCCCGGTCCATGGTCGAGCTCCTGAAGACGGAGAAGAT
TGCGTTTGCATCCTTCGACATATTGCAAGACGATGAGGTGAGGCAAGGAC
TCAAGGATTACTCGGACTGGAAAACGTATCCGCAGCTGTACGTCAACGGT
GAGCTGGTGGGGGGGCTGGACATTGTCAAGGAGATGGTGGTGGAGGGAGC
GTCCGGGCGCTTGAAAGAGGCCTTGGGCATCAAGGAACTTCCCGAGTCGG
ATGCGGCGTCTCCTGCCGACGATGTCAACCCTCTGGAGACGCGCCTAAAG
GCTCTCGTCAATGCGGCTCCCGTCATGCTCTTCATGAAGGGAGACCCCGC
GGCTCCCAAGTGTGGATTTAGCAACCAAATGGTCAGCATCTTGAAGAAAA
CAGGCGTGGCGTTTCAAAGCTTTGACATCTTGCAAGACGAGGAGGTGAGG
CAAGGACTGAAAAAAATCTCGCAGTGGCCGACGTACCCTCAGCTGTACGT
GAAGGGCGAGCTGGTGGGAGGGCTGGATATTGTCAAGGAGATGGAGGAAG
GAGGGGAGCTCGATAGTGCTCTAAAGGGGTGAATGACGGCAAATGGCGCG
AGGGAGGTGATAGATGTGATGTCCAAGGCCCAATGGGACACACTTCTAAA
AG
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Synonyms
Publications