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Properties
| Property Name | Value |
|---|
| Product | Putative repair protein |
| Orig transcript id | gnl|cribi|Naga_100229g2.2606.mrna |
| Orig protein id | gnl|cribi|Naga_100229g2.2606 |
| Gene | oec |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:266308..268520 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7569 ID=rna7569|Name=rna7569|organism=Nannochloropsis gaditana|type=mRNA|length=686bp
GGGGTACGGGGTGAATTTTCATGAAAGGGAAGGTTATGGTGAGACTGTAA
TGGGATCAGGCATGTCCCGAACAGGGAGGGAGTGCTCGGTCTCGTCGGTG
CAGGGGCGCGGGACAGGTCACCATATCTCGATAAAAGGTGGGACTAGTAT
CGAAGAAATCAGGGATGCACATCCTGCCTTTGGGCGGCAGCAATGTGCAG
TCTGTTCGGAGATACGGAACAGCCACAGCGTGCGCGGGACGGAGAAATAC
AATTGGAGTCGCACCATTGCTAGCTTACGGCGTTTCGTCTCGATCATAGG
GCCGGCTGAGAAGCCTTCCCTCTCCCAGTCGCGGAACCGTCACGAACTAT
GGTCTGACTGAACTTTATGCGAAACAAAAGTAAAGCAGAATGGCAGTCGA
TGGCCACAGAAAATGGGAATATATCTTCGGGGTAAGCTTACATAGTGCGC
GGTCGCTCTGTTTTCGATGTGTATGCGGTTCACATCTGTAAGGTATGGAA
ACAATGCATGTAGAAATTAGAAATGAAGCCGGCGATGTGAGGCGGAGACG
AGTTGTGGGCAGTGGGACATGTCCATGGTCTTGTCAACGTCATATCTCTG
TCACGGGCTCTATAGACAGGCAGGTAAAAAGGTCACAGACAGGCAAAGAT
AACGTCAAAGAATATGCGTAGAGAACAAAGCTAGAT back to topprotein sequence of rna7569 >rna7569-protein ID=rna7569-protein|Name=rna7569|organism=Nannochloropsis gaditana|type=polypeptide|length=329bp
MKFLVYFSLLEKGASLVGPLVELLTQKSMQPRNAPQGTTFKTFCLLWFLA
GSGAFHVQPNARFSVVRDDSGILGSSRRGTLTTRKATEKSDHGGSNPFFA
AHPPSTKSRHGFLGGLFSAGLLTIGTFSLQPVWARPEGVNKPELLPKERS
NVIDLERFLTSGQKKRLSQQLDALEKDSGIKVRLLCQRYPDTPGLAIKDY
WGLDDKSIVVVADKGPANIKQVATRNLLNFNVGSGLQLLLPPAFWNRLRS
QFGSIFYLRSHGDDEAIIATINTIDTCIRLKGCVDVPKGAAEEEGEWNLK
REAHLGGNDCKPIEITTIEYTSNAKQAML back to topmRNA from alignment at CM002472.1:266308..268520+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7569 ID=rna7569|Name=rna7569|organism=Nannochloropsis gaditana|type=mRNA|length=2213bp|location=Sequence derived from alignment at CM002472.1:266308..268520+ (Nannochloropsis gaditana)
ATGAAGTTCCTTGTTTATTTCAGTTTGCTGGAAAAAGGTGCGGTAGGGAT
AACGCGTGGTGAAATTTTCGATGCCTAGACCGACGTTTATGGCCACGTAA
GATACTGCTTCTGCCACAATGCAAATATGTAACGTATATGATTGGTAAAC
CACCGAGGCGTGGAACATCATTTTCGTCTTGTAGACTCCTATGCAAGCAT
AGTGTGCTAGTGACAGGTTGGTAGATCGTTGCCTGCTAGCCCTCGAGCGC
GTCCGCCGGGCGACTTTACCCGTCACCTCAGCCGTTTGTAAGCCAAGACA
ACATCAATATACCACATGTTCTTTGGTGCGAAGAAATACATTACTATCCG
AAGTTCAGAAATGTATCCATTTCTTCAACGGATCCCGGAAGACTtattta
acctcccccccccacacTCTCGCACAGAGCTTAGTTGGCCCGCTTGTCGA
ATTGCTCACACAGAAAAGCATGCAGCCTCGAAACGCACCTCAAGGCACTA
CCTTCAAGACATTTTGTCTTTTATGGTTTTTGGCTGGGTCCGGGGCATTT
CACGTTCAACCAAATGCACGATTTTCAGTTGTCCGAGATGACAGCGGCAT
TcttggcagcagcaggaggggcactCTGACGACCAGGAAGGCTACTGAAA
AATCAGATCATGGAGGAAGTAATCCCTTTTTTGCCGctcatcccccctcc
acaaAGTCCCGTCATGGGTTTCTGGGAGGACTCTTCTCAGCCGGTAAGTG
CCAGCAACGCGTTAAGTATTCCCCGTTGATGCTTTCAAAAGGTTCTTGGG
TCCCTCTACCTTTGCGATCTTGAACAATTTATTTTTTTAATTAGATAATT
CTATCTCTATTTGCTAATTTTCCTGTGGGATCGGGTGAGCATCCTTGTCG
CTCGCACAAAAGCTCACAACTTACACAATCTTTCTCCTCCTAGGACTGCT
GACCATCGGCACGTTTTCTCTTCAACCTGTATGGGCCCGTCCGGAAGGCG
TCAACAAACCAGTACGTGTAGGGTAGATTTAGATACAAAAAGAGGGCCTT
GAGGGCGTATGGCTTGGGGACACGCGGGTCCTTTCAACGTCTCCTCCCGA
GCTCACCTCAttcattcctcccctctttcctccctttcctcacaTCGTTC
CTGGCCAGGAGCTTCTCCCCAAAGAGCGGAGCAACGTCATTGACTTGGAG
CGATTCCTAACCTCGGGTCAGAAGAAGCGTCTAAGCCAGCAATTGGATGC
GCTGGAGAAGGACTCCGGCATCAaggtccgcctcctctgccaacGGTAAG
CAGCGTAATACGCCATTTCCTGCCATTGTCGCATTTCTATCCCGTcgtca
tccccttcccccacctaACCCCCTGCGCGTTGCCCTGCATGCCTCCCTAG
CTACCCCGACACGCCGGGGCTGGCCATCAAGGACTACTGGGGGCTGGACG
ATAAAAGCATCGTGGTGGTCGCTGATAAGGGGCCAGCGAATATCAAGCAG
GTGGCGACAAGAAACCTGCTCAATTTCAACGTGGGGAGCGGTTTGCAgct
cttgcttcctccaGGTACTAGAAACGTCAtgcgcggggggcggggtccTC
TGTGGTGGACATGAATCTCTCTTTTGCAGGAAAAGAACGACTTGCGAGCA
AGATACTTGTGTGGCATGTGGTCAAAATGTATTTTTTGTGTGCTAAAAAG
AAGGGCCCATGGAGCGCCTGTATGGGAGAACCAATTGCTCCTTGAGGGCA
TTTTGAACAGCAGTACTATCAGTAAATGATGCTGATTGGTTCTATTAGGA
TTCACGCTGACATTGCTCCCTAtaatttcttcttctctaTCCATGCCTAG
CGTTCTGGAACCGTCTCCGCTCTCAGTTTGGCTCCATCTTCTACCTGCGT
AGCCACGGCGACGACGAAGCCATCATCGCCACGATCAACACGATCGATAC
GTGCATTCGCCTCAAGGGCTGTGTCGACGTCCCCAAAGgggcggcggaag
aagagggggtaTTCAGTTTCTTGAAGTAATGTGGTATAGGCGTTATGTCT
ctcgtggaggtggagcttGGTGTTGTGAAGCACGTGAAAAAATGAAGTGG
TTCAATAGGAGTGGAACCTGAAGCGTGAAGCTCATCTTGGAGGAAACGAT
TGCAAACCAATAGAGATAACTACGATCGAGTACACGAGTAATGCAAAACA
AGCTATGCTTTAA back to topCoding sequence (CDS) from alignment at CM002472.1:266308..268520+ >rna7569 ID=rna7569|Name=rna7569|organism=Nannochloropsis gaditana|type=CDS|length=6930bp|location=Sequence derived from alignment at CM002472.1:266308..268520+ (Nannochloropsis gaditana)
ATGAAGTTCCTTGTTTATTTCAGTTTGCTGGAAAAAGGTGCGAGCTTAGT
TGGCCCGCTTGTCGAATTGCTCACACAGAAAAGCATGCAGCCTCGAAACG
CACCTCAAGGCACTACCTTCAAGACATTTTGTCTTTTATGGTTTTTGGCT
GGGTCCGGGGCATTTCACGTTCAACCAAATGCACGATTTTCAGTTGTCCG
AGATGACAGCGGCATTcttggcagcagcaggaggggcactCTGACGACCA
GGAAGGCTACTGAAAAATCAGATCATGGAGGAAGTAATCCCTTTTTTGCC
GctcatcccccctccacaaAGTCCCGTCATGGGTTTCTGGGAGGACTCTT
CTCAGCCGGACTGCTGACCATCGGCACGTTTTCTCTTCAACCTGTATGGG
CCCGTCCGGAAGGCGTCAACAAACCAGAGCTTCTCCCCAAAGAGCGGAGC
AACGTCATTGACTTGGAGCGATTCCTAACCTCGGGTCAGAAGAAGCGTCT
AAGCCAGCAATTGGATGCGCTGGAGAAGGACTCCGGCATCAaggtccgcc
tcctctgccaacGCTACCCCGACACGCCGGGGCTGGCCATCAAGGACTAC
TGGGGGCTGGACGATAAAAGCATCGTGGTGGTCGCTGATAAGGGGCCAGC
GAATATCAAGCAGGTGGCGACAAGAAACCTGCTCAATTTCAACGTGGGGA
GCGGTTTGCAgctcttgcttcctccaGCGTTCTGGAACCGTCTCCGCTCT
CAGTTTGGCTCCATCTTCTACCTGCGTAGCCACGGCGACGACGAAGCCAT
CATCGCCACGATCAACACGATCGATACGTGCATTCGCCTCAAGGGCTGTG
TCGACGTCCCCAAAGgggcggcggaagaagaggggGAGTGGAACCTGAAG
CGTGAAGCTCATCTTGGAGGAAACGATTGCAAACCAATAGAGATAACTAC
GATCGAGTACACGAGTAATGCAAAACAAGCTATGCTTTAAATGAAGTTCC
TTGTTTATTTCAGTTTGCTGGAAAAAGGTGCGAGCTTAGTTGGCCCGCTT
GTCGAATTGCTCACACAGAAAAGCATGCAGCCTCGAAACGCACCTCAAGG
CACTACCTTCAAGACATTTTGTCTTTTATGGTTTTTGGCTGGGTCCGGGG
CATTTCACGTTCAACCAAATGCACGATTTTCAGTTGTCCGAGATGACAGC
GGCATTcttggcagcagcaggaggggcactCTGACGACCAGGAAGGCTAC
TGAAAAATCAGATCATGGAGGAAGTAATCCCTTTTTTGCCGctcatcccc
cctccacaaAGTCCCGTCATGGGTTTCTGGGAGGACTCTTCTCAGCCGGA
CTGCTGACCATCGGCACGTTTTCTCTTCAACCTGTATGGGCCCGTCCGGA
AGGCGTCAACAAACCAGAGCTTCTCCCCAAAGAGCGGAGCAACGTCATTG
ACTTGGAGCGATTCCTAACCTCGGGTCAGAAGAAGCGTCTAAGCCAGCAA
TTGGATGCGCTGGAGAAGGACTCCGGCATCAaggtccgcctcctctgcca
acGCTACCCCGACACGCCGGGGCTGGCCATCAAGGACTACTGGGGGCTGG
ACGATAAAAGCATCGTGGTGGTCGCTGATAAGGGGCCAGCGAATATCAAG
CAGGTGGCGACAAGAAACCTGCTCAATTTCAACGTGGGGAGCGGTTTGCA
gctcttgcttcctccaGCGTTCTGGAACCGTCTCCGCTCTCAGTTTGGCT
CCATCTTCTACCTGCGTAGCCACGGCGACGACGAAGCCATCATCGCCACG
ATCAACACGATCGATACGTGCATTCGCCTCAAGGGCTGTGTCGACGTCCC
CAAAGgggcggcggaagaagaggggGAGTGGAACCTGAAGCGTGAAGCTC
ATCTTGGAGGAAACGATTGCAAACCAATAGAGATAACTACGATCGAGTAC
ACGAGTAATGCAAAACAAGCTATGCTTTAAATGAAGTTCCTTGTTTATTT
CAGTTTGCTGGAAAAAGGTGCGAGCTTAGTTGGCCCGCTTGTCGAATTGC
TCACACAGAAAAGCATGCAGCCTCGAAACGCACCTCAAGGCACTACCTTC
AAGACATTTTGTCTTTTATGGTTTTTGGCTGGGTCCGGGGCATTTCACGT
TCAACCAAATGCACGATTTTCAGTTGTCCGAGATGACAGCGGCATTcttg
gcagcagcaggaggggcactCTGACGACCAGGAAGGCTACTGAAAAATCA
GATCATGGAGGAAGTAATCCCTTTTTTGCCGctcatcccccctccacaaA
GTCCCGTCATGGGTTTCTGGGAGGACTCTTCTCAGCCGGACTGCTGACCA
TCGGCACGTTTTCTCTTCAACCTGTATGGGCCCGTCCGGAAGGCGTCAAC
AAACCAGAGCTTCTCCCCAAAGAGCGGAGCAACGTCATTGACTTGGAGCG
ATTCCTAACCTCGGGTCAGAAGAAGCGTCTAAGCCAGCAATTGGATGCGC
TGGAGAAGGACTCCGGCATCAaggtccgcctcctctgccaacGCTACCCC
GACACGCCGGGGCTGGCCATCAAGGACTACTGGGGGCTGGACGATAAAAG
CATCGTGGTGGTCGCTGATAAGGGGCCAGCGAATATCAAGCAGGTGGCGA
CAAGAAACCTGCTCAATTTCAACGTGGGGAGCGGTTTGCAgctcttgctt
cctccaGCGTTCTGGAACCGTCTCCGCTCTCAGTTTGGCTCCATCTTCTA
CCTGCGTAGCCACGGCGACGACGAAGCCATCATCGCCACGATCAACACGA
TCGATACGTGCATTCGCCTCAAGGGCTGTGTCGACGTCCCCAAAGgggcg
gcggaagaagaggggGAGTGGAACCTGAAGCGTGAAGCTCATCTTGGAGG
AAACGATTGCAAACCAATAGAGATAACTACGATCGAGTACACGAGTAATG
CAAAACAAGCTATGCTTTAAATGAAGTTCCTTGTTTATTTCAGTTTGCTG
GAAAAAGGTGCGAGCTTAGTTGGCCCGCTTGTCGAATTGCTCACACAGAA
AAGCATGCAGCCTCGAAACGCACCTCAAGGCACTACCTTCAAGACATTTT
GTCTTTTATGGTTTTTGGCTGGGTCCGGGGCATTTCACGTTCAACCAAAT
GCACGATTTTCAGTTGTCCGAGATGACAGCGGCATTcttggcagcagcag
gaggggcactCTGACGACCAGGAAGGCTACTGAAAAATCAGATCATGGAG
GAAGTAATCCCTTTTTTGCCGctcatcccccctccacaaAGTCCCGTCAT
GGGTTTCTGGGAGGACTCTTCTCAGCCGGACTGCTGACCATCGGCACGTT
TTCTCTTCAACCTGTATGGGCCCGTCCGGAAGGCGTCAACAAACCAGAGC
TTCTCCCCAAAGAGCGGAGCAACGTCATTGACTTGGAGCGATTCCTAACC
TCGGGTCAGAAGAAGCGTCTAAGCCAGCAATTGGATGCGCTGGAGAAGGA
CTCCGGCATCAaggtccgcctcctctgccaacGCTACCCCGACACGCCGG
GGCTGGCCATCAAGGACTACTGGGGGCTGGACGATAAAAGCATCGTGGTG
GTCGCTGATAAGGGGCCAGCGAATATCAAGCAGGTGGCGACAAGAAACCT
GCTCAATTTCAACGTGGGGAGCGGTTTGCAgctcttgcttcctccaGCGT
TCTGGAACCGTCTCCGCTCTCAGTTTGGCTCCATCTTCTACCTGCGTAGC
CACGGCGACGACGAAGCCATCATCGCCACGATCAACACGATCGATACGTG
CATTCGCCTCAAGGGCTGTGTCGACGTCCCCAAAGgggcggcggaagaag
aggggGAGTGGAACCTGAAGCGTGAAGCTCATCTTGGAGGAAACGATTGC
AAACCAATAGAGATAACTACGATCGAGTACACGAGTAATGCAAAACAAGC
TATGCTTTAAATGAAGTTCCTTGTTTATTTCAGTTTGCTGGAAAAAGGTG
CGAGCTTAGTTGGCCCGCTTGTCGAATTGCTCACACAGAAAAGCATGCAG
CCTCGAAACGCACCTCAAGGCACTACCTTCAAGACATTTTGTCTTTTATG
GTTTTTGGCTGGGTCCGGGGCATTTCACGTTCAACCAAATGCACGATTTT
CAGTTGTCCGAGATGACAGCGGCATTcttggcagcagcaggaggggcact
CTGACGACCAGGAAGGCTACTGAAAAATCAGATCATGGAGGAAGTAATCC
CTTTTTTGCCGctcatcccccctccacaaAGTCCCGTCATGGGTTTCTGG
GAGGACTCTTCTCAGCCGGACTGCTGACCATCGGCACGTTTTCTCTTCAA
CCTGTATGGGCCCGTCCGGAAGGCGTCAACAAACCAGAGCTTCTCCCCAA
AGAGCGGAGCAACGTCATTGACTTGGAGCGATTCCTAACCTCGGGTCAGA
AGAAGCGTCTAAGCCAGCAATTGGATGCGCTGGAGAAGGACTCCGGCATC
AaggtccgcctcctctgccaacGCTACCCCGACACGCCGGGGCTGGCCAT
CAAGGACTACTGGGGGCTGGACGATAAAAGCATCGTGGTGGTCGCTGATA
AGGGGCCAGCGAATATCAAGCAGGTGGCGACAAGAAACCTGCTCAATTTC
AACGTGGGGAGCGGTTTGCAgctcttgcttcctccaGCGTTCTGGAACCG
TCTCCGCTCTCAGTTTGGCTCCATCTTCTACCTGCGTAGCCACGGCGACG
ACGAAGCCATCATCGCCACGATCAACACGATCGATACGTGCATTCGCCTC
AAGGGCTGTGTCGACGTCCCCAAAGgggcggcggaagaagaggggGAGTG
GAACCTGAAGCGTGAAGCTCATCTTGGAGGAAACGATTGCAAACCAATAG
AGATAACTACGATCGAGTACACGAGTAATGCAAAACAAGCTATGCTTTAA
ATGAAGTTCCTTGTTTATTTCAGTTTGCTGGAAAAAGGTGCGAGCTTAGT
TGGCCCGCTTGTCGAATTGCTCACACAGAAAAGCATGCAGCCTCGAAACG
CACCTCAAGGCACTACCTTCAAGACATTTTGTCTTTTATGGTTTTTGGCT
GGGTCCGGGGCATTTCACGTTCAACCAAATGCACGATTTTCAGTTGTCCG
AGATGACAGCGGCATTcttggcagcagcaggaggggcactCTGACGACCA
GGAAGGCTACTGAAAAATCAGATCATGGAGGAAGTAATCCCTTTTTTGCC
GctcatcccccctccacaaAGTCCCGTCATGGGTTTCTGGGAGGACTCTT
CTCAGCCGGACTGCTGACCATCGGCACGTTTTCTCTTCAACCTGTATGGG
CCCGTCCGGAAGGCGTCAACAAACCAGAGCTTCTCCCCAAAGAGCGGAGC
AACGTCATTGACTTGGAGCGATTCCTAACCTCGGGTCAGAAGAAGCGTCT
AAGCCAGCAATTGGATGCGCTGGAGAAGGACTCCGGCATCAaggtccgcc
tcctctgccaacGCTACCCCGACACGCCGGGGCTGGCCATCAAGGACTAC
TGGGGGCTGGACGATAAAAGCATCGTGGTGGTCGCTGATAAGGGGCCAGC
GAATATCAAGCAGGTGGCGACAAGAAACCTGCTCAATTTCAACGTGGGGA
GCGGTTTGCAgctcttgcttcctccaGCGTTCTGGAACCGTCTCCGCTCT
CAGTTTGGCTCCATCTTCTACCTGCGTAGCCACGGCGACGACGAAGCCAT
CATCGCCACGATCAACACGATCGATACGTGCATTCGCCTCAAGGGCTGTG
TCGACGTCCCCAAAGgggcggcggaagaagaggggGAGTGGAACCTGAAG
CGTGAAGCTCATCTTGGAGGAAACGATTGCAAACCAATAGAGATAACTAC
GATCGAGTACACGAGTAATGCAAAACAAGCTATGCTTTAAATGAAGTTCC
TTGTTTATTTCAGTTTGCTGGAAAAAGGTGCGAGCTTAGTTGGCCCGCTT
GTCGAATTGCTCACACAGAAAAGCATGCAGCCTCGAAACGCACCTCAAGG
CACTACCTTCAAGACATTTTGTCTTTTATGGTTTTTGGCTGGGTCCGGGG
CATTTCACGTTCAACCAAATGCACGATTTTCAGTTGTCCGAGATGACAGC
GGCATTcttggcagcagcaggaggggcactCTGACGACCAGGAAGGCTAC
TGAAAAATCAGATCATGGAGGAAGTAATCCCTTTTTTGCCGctcatcccc
cctccacaaAGTCCCGTCATGGGTTTCTGGGAGGACTCTTCTCAGCCGGA
CTGCTGACCATCGGCACGTTTTCTCTTCAACCTGTATGGGCCCGTCCGGA
AGGCGTCAACAAACCAGAGCTTCTCCCCAAAGAGCGGAGCAACGTCATTG
ACTTGGAGCGATTCCTAACCTCGGGTCAGAAGAAGCGTCTAAGCCAGCAA
TTGGATGCGCTGGAGAAGGACTCCGGCATCAaggtccgcctcctctgcca
acGCTACCCCGACACGCCGGGGCTGGCCATCAAGGACTACTGGGGGCTGG
ACGATAAAAGCATCGTGGTGGTCGCTGATAAGGGGCCAGCGAATATCAAG
CAGGTGGCGACAAGAAACCTGCTCAATTTCAACGTGGGGAGCGGTTTGCA
gctcttgcttcctccaGCGTTCTGGAACCGTCTCCGCTCTCAGTTTGGCT
CCATCTTCTACCTGCGTAGCCACGGCGACGACGAAGCCATCATCGCCACG
ATCAACACGATCGATACGTGCATTCGCCTCAAGGGCTGTGTCGACGTCCC
CAAAGgggcggcggaagaagaggggGAGTGGAACCTGAAGCGTGAAGCTC
ATCTTGGAGGAAACGATTGCAAACCAATAGAGATAACTACGATCGAGTAC
ACGAGTAATGCAAAACAAGCTATGCTTTAA back to top
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