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Properties
| Property Name | Value |
|---|
| Product | ethylene-inducible protein |
| Orig transcript id | gnl|cribi|Naga_100043g37.7234.mrna |
| Orig protein id | gnl|cribi|Naga_100043g37.7234 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:204762..207349 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7547 ID=rna7547|Name=rna7547|organism=Nannochloropsis gaditana|type=mRNA|length=2314bp
CTGACTGGGCGGGGCCGTGTGAGTGGGAGTGCAGCTTTGCGGGCGTGACT
GTGGTCTTTTTTGTTCCCTGTGCTCCAAACGCATGCGATAAGAAGCACAT
TATGCTATTGTGGACATGTGACGCTTTTTGAGGCTTCGTCATTTGCGGCT
GAAGCCTCCTCTTCTGCTGCTTGGGATGAGTCAGGCAAGATACTGGGCCG
GTCAGGACCTGACCTCGCCTTTCCATTCCAAAAAGCATGCGAGCTCTCTA
CGTGTGTGAAGGATTGTGGATTTGAGCAGGCAGTGACACGCTCGGTGTAT
AAGTGTGTCAAGCGTGGCTCTTTTGTCATGCACGCACGGGAGGCACCATT
CGTTGTCCTGACGAAGTGCTGCTTCACAGGCTAATGCATGCAGAGATTGT
GGGCCGCCCGTCGCCCGTGTTATTTTATAGTGCACGCCTCATTTTTTTGG
ACTTTTTGATCAGGATCATCAGAATATGTCATAATACAACAATTCACAAC
ACATAAAAAGCCGGCATCTCAGACACCAGTCGTCATGAACGGGCACGCCA
ATGGCAACGGCAGCACCCACGGGGGACCTTCGTCCTCCTCGACCTCGACG
GGGGCTGTGGGTACATTTCGCGTGAAAGCTGGCCTGGCGCAAATGCTCAA
GGGCGGCGTCATTATGGGTATGTGACAGGGTGGGGCACGAGGTGGTGAAA
TGCGTGTCATTGAAATGGGGCAACTGGTTGGGTGATGTGGCCTCTACTGC
AAGTGCGTGTCTCTGCGTAAGGCTGACTTGATTCGTTTTACGAGCCTGTC
ATTGCTTGGCGGGAAGTCTATTTTGTGGATGGCTTCATGCAGTGAAGGGT
AGCAGAAGTTTGCAGGCGTTGCTTTACAAAGTAGTCTTCCTCCTGAGCCC
GGGCGAGGAACAAAGCACCCATCCCTCCCGTCACCGTCACTGCTTCTCTT
GCCTTCAGTCCTGACATTGTTGTACTCATTTTTGGAACTTAGACGTGGTG
GATGTGGAGCAGGCAAAGATTGCAGAGGCTGCTGGTGCAGTGGCAGTGAT
GGCGCTTGAGCGCATCCCTGCCGATATCCGTCGTGACGGGGGCGTGGCGC
GTATGAGCGACCCGGCCATGATCAAGGAGATCAAGGCGGCGGTGACCATC
CCAGTGATGGCTAAGGCCCGCATCGGACATTTTGTAGAGGCCCAAATTCT
GGAGACGATCGAGGTAGATTACATCGATGAGTCCGAGGTTCTGACCATGG
CGGACGAGGACAATCACATCAACAAGAACAAGTTCAAAGTACCCTTCGTA
TGCGGGTGCCGGGATTTGGGGGAGGCCCTCCGGCGTGTGGCCGAGGGGGC
GGCGATGCTCCGCACCAAGGGAGAAGCGGGAACGGGGAATGTGGTGGAGG
CGGTGCGGCACGCGCGCACCGTGCAACGGGAGATCCGGCGCTTGAAGACA
ATGGATGAGGACGAACTGTTTGTGTACGCCAAGGACATCAGGGCACCGCT
GGAGCTCGTGCAAGAGGTGGCACGCAGTGGGAAGCTTCCAGTCGTGAATT
TCGCGGCCGGTGGGGTAGCCACGCCGGCAGATGCAGCGTTGATGATGCAG
TTGGGTCTGGACGGTGTGTTTGTGGGATCAGGGATCTTTAAATCGACCGA
GCCGGAGAAGCGCGCCCGGGCCATTGTTCAGGCGGTGACGCATTTCCGAA
ACCCGCAGGTGTTGGCAGAGGTTAGCACGAAATTGGGTGTACCCATGGTG
GGCATATCGGACATCAAGGGGGACCCTGTGAACTTCCGGGACCGCGAGGG
GGGTGTTGCGGGTGACGGCGTTCCCCCCAAGAAGCAGCTACACGGTGCCA
CGGAGACCCAGCTGTACGGATCGAGCTGGAATGTGGGGAATCAGCACCGT
TAGAAAGGGAGGACGGGGAGAGTTACCAGCGGTATGAGGTCGCGACTATT
GCGTTCGAGGGAGCCTTGTCTGTTGAAACGTCCGAAGGTGTTATGACGAG
AGAATGAATTAGCGCAAGGTAGCGGGTGGCATAGCGGAGAGAGATCTTGC
AGTTCCAGCATCATGTCAGAGCACCACGGACAAGGACGCGCACGGCTGTA
TCTTCCATGCCGCACCGCTTTCCCATATATGTCAAGGAACTGGATGGTTA
GTTGAGCAAAGTAGGGAACGTTAAAAATTTTAACAATGTCACCATAATCC
AAGGCTGAAGTATGTAGGTAGAAAGTCTGGAATGGCCCGTGCATTCTTGT
GTCCATGTCTCTGCTTAAGTATGATGACAGACGCAAAGAAGATGACCAAG
GGGGCCTGCCTGCC back to topprotein sequence of rna7547 >rna7547-protein ID=rna7547-protein|Name=rna7547|organism=Nannochloropsis gaditana|type=polypeptide|length=347bp
MNGHANGNGSTHGGPSSSSTSTGAVGTFRVKAGLAQMLKGGVIMDVVDVE
QAKIAEAAGAVAVMALERIPADIRRDGGVARMSDPAMIKEIKAAVTIPVM
AKARIGHFVEAQILETIEVDYIDESEVLTMADEDNHINKNKFKVPFVCGC
RDLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARTVQREIRRLKTMDE
DELFVYAKDIRAPLELVQEVARSGKLPVVNFAAGGVATPADAALMMQLGL
DGVFVGSGIFKSTEPEKRARAIVQAVTHFRNPQVLAEVSTKLGVPMVGIS
DIKGDPVNFRDREGGVAGDGVPPKKQLHGATETQLYGSSWNVGNQHR back to topmRNA from alignment at CM002472.1:204762..207349+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7547 ID=rna7547|Name=rna7547|organism=Nannochloropsis gaditana|type=mRNA|length=2588bp|location=Sequence derived from alignment at CM002472.1:204762..207349+ (Nannochloropsis gaditana)
CTGACTGGGCGGGGCCGTGTGAGTGGGAGTGCAGCTTTGCGGGCGTGACT
GTGGTCTTTTTTGTTCCCTGTGCTCCAAACGCATGCGATAAGAAGCACAT
TATGCTATTGTGGACATGTGACGCTTTTTGAGGCTTCGTCATTTGCGGCT
gaagcctcctcttctgctgCTTGGGATGAGTCAGGCAAGATACTGGGCCG
GTCAGGACCTGACCTCGCCTTTCCATTCCAAAAAGCATGCGAGCTCTCTA
CGTGTGTGAAGGATTGTGGATTTGAGCAGGCAGTGACACGCTCGGTGTAT
AAGTGTGTCAAGCGTGGCTCTTTTGTCATGCACGCACGGGAGGCACCATT
CGTTGTCCTGACGAAGTGCTGCTTCACAGGCTAATGCATGCAGAGATTGT
GGGCCGCCCGTCGCCCGTGTTATTTTATAGTGCACGCCTCATTTTTTTGG
ACTTTTTGATCAGGATCATCAGAATATGTCATAATACAACAATTCACAAC
ACATAAAAAGCCGGCATCTCAGACACCAGTCGTCATGAACGGGCACGCCA
ATGGCAACGGCAGCACCCACGGGGgaccttcgtcctcctcgacctcgacg
GGGGCTGTGGGTACATTTCGCGTGAAAGCTGGCCTGGCGCAAATGCTCAA
GGGCGGCGTCATTATGGGTATGTGACAGGGTGGGGCACGAGGTGGTGAAA
TGCGTGTCATTGAAATGGGGCAACTGGTTGGGTGATGTGGCCTCTACTGC
AAGTGCGTGTCTCTGCGTAAGGCTGACTTGATTCGTTTTACGAGCCTGTC
ATTGCTTGGCGGGAAGTCTATTTTGTGGATGGCTTCATGCAGTGAAGGGT
AGCAGAAGTTTGCAGGCGTTGCTTTACAAAGTagtcttcctcctgagcCC
GGGCGAGGAACAAAgcacccatccctcccgtcACCGTCACTGCTTCTCTT
GCCTTCAGTCCTGACATTGTTGTACTCATTTTTGGAACTTAGACGTGGTG
GATGTGGAGCAGGCAAAGATTGCAGAGGCTGCTGGTGCAGTGGCAGTGAT
GGCGCTTGAGCGCATCCCTGCCGATATCCGTCGTGACGGGGGCGTGGCGC
GTATGAGCGACCCGGCCATGATCAAGGAGATCAAGGCGGCGGTGACCATC
CCAGTGATGGCTAAGGTGAGCCAGAGATtgcgaggagaaggctgcAAGGA
AGGTAGAAGTGACCGGCACATCTGGCTGTAGAAGTGAACGAGAAGTAATC
AAGGCAAGAGGGCCGTGAGGAAAGATTGATGAACCATAAGCAGATAGGGA
CATCAGAGCGCAATCTTTTCGTGCACATGCTGATTTCATCTACTCTTACG
ACTGAGCCTGAGAAATGCATGACGTCTCAGGCCTCATGACAGTAAGGGCC
ATGACTAACCGCTCGGTCGCTCCGTGTCTTTCCTCCTAGGCCCGCATCGG
ACATTTTGTAGAGGCCCAAATTCTGGAGACGATCGAGGTAGATTACATCG
ATGAGTCCGAGGTTCTGACcatggcggacgaggacaaTCACATCAACAAG
AACAAGTTCAAAGTACCCTTCGTATGCGGGTGCCGGGATTTGGGGGAGGC
CCTCCGGCGTGTGGCCGAGGGGGCGGCGATGCTCCGCACCAAGGGAGAAG
CGGGAACGGGGaatgtggtggaggcggtgcggcACGCGCGCACCGTGCAA
CGGGAGATCCGGCGCTTGAAGACAATGGATGAGGACGAACTGTTTGTGTA
CGCCAAGGACATCAGGGCACCGCTGGAGCTCGTGCAAGAGGTGGCACGCA
GTGGGAAGCTTCCAGTCGTGAATTTCGCGGCCGGTGGGGTAGCCACGCCG
GCAGATGCAGCGTTGATGATGCAGTTGGGTCTGGACGGTGTGTTTGTGGG
ATCAGGGATCTTTAAATCGACCGAGCCGGAGAAGCGCGCCCGGGCCATTG
TTCAGGCGGTGACGCATTTCCGAAACCCGCAGGTGTTGGCAGAGGTTAGC
ACGAAATTGGGTGTACCCATGGTGGGCATATCGGACATCAAGGGGGACCC
TGTGAACTTCCGGGACCGCGAGGGGGGTGTTGCGGGTGACGGCGTTCCCC
CCAAGAAGCAGCTACACGGTGCCACGGAGACCCAGCTGTACGGATCGAGC
TGGAATGTGGGGAATCAGCACCGTtagaaagggaggacggggagagtTAC
CAGCGGTATGAGGTCGCGACTATTGCGTTCGAGGGAGCCTTGTCTGTTGA
AACGTCCGAAGGTGTTATGACGAGAGAATGAATTAGCGCAAGGTAGCGGG
TGGCATAGCGGAGAGAGATCTTGCAGTTCCAGCATCATGTCAGAGCACCA
CGGACAAGGACGCGCACGGCTGTATCTTCCATGCCGCACCGCTTTCCCAT
ATATGTCAAGGAACTGGATGGTTAGTTGAGCAAAGTAGGGAACGTTAAAA
ATTTTAACAATGTCACCATAATCCAAGGCTGAAGTATGTAGGTAGAAAGT
CTGGAATGGCCCGTGCATTCTTGTGTCCATGTCTCTGCTTAAGTATGATG
ACAGACGCAAAGAAGATGACCAAGGGGGCCTGCCTGCC back to topCoding sequence (CDS) from alignment at CM002472.1:204762..207349+ >rna7547 ID=rna7547|Name=rna7547|organism=Nannochloropsis gaditana|type=CDS|length=3132bp|location=Sequence derived from alignment at CM002472.1:204762..207349+ (Nannochloropsis gaditana)
ATGAACGGGCACGCCAATGGCAACGGCAGCACCCACGGGGgaccttcgtc
ctcctcgacctcgacgGGGGCTGTGGGTACATTTCGCGTGAAAGCTGGCC
TGGCGCAAATGCTCAAGGGCGGCGTCATTATGGACGTGGTGGATGTGGAG
CAGGCAAAGATTGCAGAGGCTGCTGGTGCAGTGGCAGTGATGGCGCTTGA
GCGCATCCCTGCCGATATCCGTCGTGACGGGGGCGTGGCGCGTATGAGCG
ACCCGGCCATGATCAAGGAGATCAAGGCGGCGGTGACCATCCCAGTGATG
GCTAAGGCCCGCATCGGACATTTTGTAGAGGCCCAAATTCTGGAGACGAT
CGAGGTAGATTACATCGATGAGTCCGAGGTTCTGACcatggcggacgagg
acaaTCACATCAACAAGAACAAGTTCAAAGTACCCTTCGTATGCGGGTGC
CGGGATTTGGGGGAGGCCCTCCGGCGTGTGGCCGAGGGGGCGGCGATGCT
CCGCACCAAGGGAGAAGCGGGAACGGGGaatgtggtggaggcggtgcggc
ACGCGCGCACCGTGCAACGGGAGATCCGGCGCTTGAAGACAATGGATGAG
GACGAACTGTTTGTGTACGCCAAGGACATCAGGGCACCGCTGGAGCTCGT
GCAAGAGGTGGCACGCAGTGGGAAGCTTCCAGTCGTGAATTTCGCGGCCG
GTGGGGTAGCCACGCCGGCAGATGCAGCGTTGATGATGCAGTTGGGTCTG
GACGGTGTGTTTGTGGGATCAGGGATCTTTAAATCGACCGAGCCGGAGAA
GCGCGCCCGGGCCATTGTTCAGGCGGTGACGCATTTCCGAAACCCGCAGG
TGTTGGCAGAGGTTAGCACGAAATTGGGTGTACCCATGGTGGGCATATCG
GACATCAAGGGGGACCCTGTGAACTTCCGGGACCGCGAGGGGGGTGTTGC
GGGTGACGGCGTTCCCCCCAAGAAGCAGCTACACGGTGCCACGGAGACCC
AGCTGTACGGATCGAGCTGGAATGTGGGGAATCAGCACCGTtagATGAAC
GGGCACGCCAATGGCAACGGCAGCACCCACGGGGgaccttcgtcctcctc
gacctcgacgGGGGCTGTGGGTACATTTCGCGTGAAAGCTGGCCTGGCGC
AAATGCTCAAGGGCGGCGTCATTATGGACGTGGTGGATGTGGAGCAGGCA
AAGATTGCAGAGGCTGCTGGTGCAGTGGCAGTGATGGCGCTTGAGCGCAT
CCCTGCCGATATCCGTCGTGACGGGGGCGTGGCGCGTATGAGCGACCCGG
CCATGATCAAGGAGATCAAGGCGGCGGTGACCATCCCAGTGATGGCTAAG
GCCCGCATCGGACATTTTGTAGAGGCCCAAATTCTGGAGACGATCGAGGT
AGATTACATCGATGAGTCCGAGGTTCTGACcatggcggacgaggacaaTC
ACATCAACAAGAACAAGTTCAAAGTACCCTTCGTATGCGGGTGCCGGGAT
TTGGGGGAGGCCCTCCGGCGTGTGGCCGAGGGGGCGGCGATGCTCCGCAC
CAAGGGAGAAGCGGGAACGGGGaatgtggtggaggcggtgcggcACGCGC
GCACCGTGCAACGGGAGATCCGGCGCTTGAAGACAATGGATGAGGACGAA
CTGTTTGTGTACGCCAAGGACATCAGGGCACCGCTGGAGCTCGTGCAAGA
GGTGGCACGCAGTGGGAAGCTTCCAGTCGTGAATTTCGCGGCCGGTGGGG
TAGCCACGCCGGCAGATGCAGCGTTGATGATGCAGTTGGGTCTGGACGGT
GTGTTTGTGGGATCAGGGATCTTTAAATCGACCGAGCCGGAGAAGCGCGC
CCGGGCCATTGTTCAGGCGGTGACGCATTTCCGAAACCCGCAGGTGTTGG
CAGAGGTTAGCACGAAATTGGGTGTACCCATGGTGGGCATATCGGACATC
AAGGGGGACCCTGTGAACTTCCGGGACCGCGAGGGGGGTGTTGCGGGTGA
CGGCGTTCCCCCCAAGAAGCAGCTACACGGTGCCACGGAGACCCAGCTGT
ACGGATCGAGCTGGAATGTGGGGAATCAGCACCGTtagATGAACGGGCAC
GCCAATGGCAACGGCAGCACCCACGGGGgaccttcgtcctcctcgacctc
gacgGGGGCTGTGGGTACATTTCGCGTGAAAGCTGGCCTGGCGCAAATGC
TCAAGGGCGGCGTCATTATGGACGTGGTGGATGTGGAGCAGGCAAAGATT
GCAGAGGCTGCTGGTGCAGTGGCAGTGATGGCGCTTGAGCGCATCCCTGC
CGATATCCGTCGTGACGGGGGCGTGGCGCGTATGAGCGACCCGGCCATGA
TCAAGGAGATCAAGGCGGCGGTGACCATCCCAGTGATGGCTAAGGCCCGC
ATCGGACATTTTGTAGAGGCCCAAATTCTGGAGACGATCGAGGTAGATTA
CATCGATGAGTCCGAGGTTCTGACcatggcggacgaggacaaTCACATCA
ACAAGAACAAGTTCAAAGTACCCTTCGTATGCGGGTGCCGGGATTTGGGG
GAGGCCCTCCGGCGTGTGGCCGAGGGGGCGGCGATGCTCCGCACCAAGGG
AGAAGCGGGAACGGGGaatgtggtggaggcggtgcggcACGCGCGCACCG
TGCAACGGGAGATCCGGCGCTTGAAGACAATGGATGAGGACGAACTGTTT
GTGTACGCCAAGGACATCAGGGCACCGCTGGAGCTCGTGCAAGAGGTGGC
ACGCAGTGGGAAGCTTCCAGTCGTGAATTTCGCGGCCGGTGGGGTAGCCA
CGCCGGCAGATGCAGCGTTGATGATGCAGTTGGGTCTGGACGGTGTGTTT
GTGGGATCAGGGATCTTTAAATCGACCGAGCCGGAGAAGCGCGCCCGGGC
CATTGTTCAGGCGGTGACGCATTTCCGAAACCCGCAGGTGTTGGCAGAGG
TTAGCACGAAATTGGGTGTACCCATGGTGGGCATATCGGACATCAAGGGG
GACCCTGTGAACTTCCGGGACCGCGAGGGGGGTGTTGCGGGTGACGGCGT
TCCCCCCAAGAAGCAGCTACACGGTGCCACGGAGACCCAGCTGTACGGAT
CGAGCTGGAATGTGGGGAATCAGCACCGTtag back to top
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